RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 MKRN1Q9UHC7 482 aaKnown RBP7.3□□□□□ -1.24
PTPN3-202ENST00000374541 AKAP2Q9Y2D5 859 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 SLC4A2P04920 1241 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 TRIM21P19474 475 aaKnown RBP7.3□□□□□ -1.24
PTPN3-202ENST00000374541 SMC1AQ14683 1233 aaKnown RBP7.3□□□□□ -1.24
PTPN3-202ENST00000374541 IMMTQ16891 758 aaKnown RBP7.3□□□□□ -1.24
PTPN3-202ENST00000374541 FILIP1Q7Z7B0 1213 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 RTKN2Q8IZC4 609 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 CFAP45Q9UL16 551 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 CYP46A1Q9Y6A2 500 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 NPATQ14207 1427 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 SPATA24Q86W54 205 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 ZNF444Q8N0Y2 327 aaPredicted RBP7.3□□□□□ -1.24
PTPN3-202ENST00000374541 SRCIN1Q9C0H9 1055 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 CFAP65Q6ZU64 1925 aaKnown RBP7.3□□□□□ -1.24
PTPN3-202ENST00000374541 LDHAL6AQ6ZMR3 332 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 SMC1BQ8NDV3 1235 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 PPM1EQ8WY54 764 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 ANKRD2Q9GZV1 360 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 BMP2KQ9NSY1 1161 aaPredicted RBP7.3□□□□□ -1.24
PTPN3-202ENST00000374541 RIMS1Q86UR5 1692 aaKnown RBP7.3□□□□□ -1.24
PTPN3-202ENST00000374541 ATP5J2-PTCD1G3V325 749 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 SHANK2Q9UPX8 1470 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 NEK4P51957 841 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 SUPT20HL1Q3ZLR7 823 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 ZSCAN30Q86W11 494 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 WASF1Q92558 559 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 HACL1Q9UJ83 578 aa7.3□□□□□ -1.24
PTPN3-202ENST00000374541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.29□□□□□ -1.24
PTPN3-202ENST00000374541 ZNF157P51786 506 aaPredicted RBP7.29□□□□□ -1.24
PTPN3-202ENST00000374541 CUL5Q93034 780 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 RRAGCQ9HB90 399 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 HYPKQ9NX55 129 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 C21orf2O43822 256 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 NEMFO60524 1076 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 POTEJP0CG39 1038 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 MCM10Q7L590 875 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 CCDC83Q8IWF9 413 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 IP6K1Q92551 441 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 CCDC102AQ96A19 550 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 ESPNB1AK53 854 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 TAX1BP1Q86VP1 789 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 SLC16A10Q8TF71 515 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 CGNQ9P2M7 1197 aaKnown RBP7.29□□□□□ -1.24
PTPN3-202ENST00000374541 K7ELQ4 463 aaPredicted RBP7.29□□□□□ -1.24
PTPN3-202ENST00000374541 ZBTB24O43167 697 aaPredicted RBP7.29□□□□□ -1.24
PTPN3-202ENST00000374541 KRT32Q14532 448 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 DCAF15Q66K64 600 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 RAET1EQ8TD07 263 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 EPB41L2O43491 1005 aaKnown RBP7.29□□□□□ -1.24
PTPN3-202ENST00000374541 SERPINB2P05120 415 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 ARHGAP29Q52LW3 1261 aa7.29□□□□□ -1.24
PTPN3-202ENST00000374541 LOC102724428A0A0B4J2F2 783 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 FIBPO43427 364 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 SIK1P57059 783 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 GCOM1H8Y6P7 765 aaPredicted RBP7.28□□□□□ -1.24
PTPN3-202ENST00000374541 MYZAPP0CAP1 466 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 IREB2P48200 963 aaKnown RBP7.28□□□□□ -1.24
PTPN3-202ENST00000374541 UBXN2AP68543 259 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 FAM47CQ5HY64 1035 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 PLEKHG1Q9ULL1 1385 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 GCC2Q8IWJ2 1684 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 SURF6O75683 361 aaKnown RBP7.28□□□□□ -1.24
PTPN3-202ENST00000374541 GIGYF2Q6Y7W6 1299 aaKnown RBP7.28□□□□□ -1.24
PTPN3-202ENST00000374541 ZNF397Q8NF99 534 aaPredicted RBP7.28□□□□□ -1.24
PTPN3-202ENST00000374541 EHMT1Q9H9B1 1298 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 A2ML1A8K2U0 1454 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 NCOA1Q15788 1441 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 MAP2K1Q02750 393 aaPredicted RBP7.28□□□□□ -1.24
PTPN3-202ENST00000374541 AKAP4Q5JQC9 854 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 CIAPIN1Q6FI81 312 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 NUP62CLQ9H1M0 184 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 SIGLEC1Q9BZZ2 1709 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 MICALL1Q8N3F8 863 aa7.28□□□□□ -1.24
PTPN3-202ENST00000374541 MCM5P33992 734 aa7.27□□□□□ -1.24
PTPN3-202ENST00000374541 CARD10Q9BWT7 1032 aa7.27□□□□□ -1.24
PTPN3-202ENST00000374541 UPF3BQ9BZI7 483 aaKnown RBP7.27□□□□□ -1.24
PTPN3-202ENST00000374541 CEP131Q9UPN4 1083 aa7.27□□□□□ -1.24
PTPN3-202ENST00000374541 PARP10Q53GL7 1025 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 USPL1Q5W0Q7 1092 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 PAGR1Q9BTK6 254 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 CAMSAP1Q5T5Y3 1602 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 PLEKHH1Q9ULM0 1364 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 EFCAB6Q5THR3 1501 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 BRPF1P55201 1214 aaPredicted RBP7.27□□□□□ -1.25
PTPN3-202ENST00000374541 C9orf131Q5VYM1 1079 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 CCDC174Q6PII3 467 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 CTNNA3Q9UI47 895 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 SKIDA1Q1XH10 827 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 ZBED2Q9BTP6 218 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 VEGFAP15692 232 aaPredicted RBP7.27□□□□□ -1.25
PTPN3-202ENST00000374541 TWISTNBQ3B726 338 aaPredicted RBP7.27□□□□□ -1.25
PTPN3-202ENST00000374541 NBPF15Q8N660 670 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 DDX12PQ92771 950 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 TTC37Q6PGP7 1564 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 YTHDC2Q9H6S0 1430 aaKnown RBP7.27□□□□□ -1.25
PTPN3-202ENST00000374541 GOLGA6L9A6NEM1 432 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 ME1P48163 572 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 FOSBP53539 338 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 SLC15A2Q16348 729 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms