RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 ZNF316A6NFI3 1004 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-207ENST00000374223 TMEM88BA6NKF7 163 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 PPIP5K2O43314 1243 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 SCNN1DP51172 638 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 MAP1SQ66K74 1059 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-207ENST00000374223 G2E3Q7L622 706 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 PNMA8AQ86V59 439 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-207ENST00000374223 GPR101Q96P66 508 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-207ENST00000374223 SPEF2Q9C093 1822 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 GRAPQ13588 217 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 RIC3Q7Z5B4 369 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 WWC1Q8IX03 1113 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 SP8Q8IXZ3 490 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 GPC2Q8N158 579 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 GRAPLQ8TC17 118 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-207ENST00000374223 JDP2Q8WYK2 163 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 SEC31BQ9NQW1 1179 aa18.49■□□□□ 0.55
UBXN11-207ENST00000374223 SHTN1A0MZ66 631 aa18.48■□□□□ 0.55
UBXN11-207ENST00000374223 DDX46Q7L014 1031 aaKnown RBP18.48■□□□□ 0.55
UBXN11-207ENST00000374223 RTFDC1Q9BY42 306 aaPredicted RBP18.48■□□□□ 0.55
UBXN11-207ENST00000374223 MRS2Q9HD23 443 aa18.48■□□□□ 0.55
UBXN11-207ENST00000374223 CLEC11AQ9Y240 323 aa18.48■□□□□ 0.55
UBXN11-207ENST00000374223 SCN9AQ15858 1988 aa18.47■□□□□ 0.55
UBXN11-207ENST00000374223 YDJCA8MPS7 323 aa18.47■□□□□ 0.55
UBXN11-207ENST00000374223 IRS4O14654 1257 aaPredicted RBP18.47■□□□□ 0.55
UBXN11-207ENST00000374223 BBOX1O75936 387 aa18.47■□□□□ 0.55
UBXN11-207ENST00000374223 EIF6P56537 245 aaKnown RBP18.47■□□□□ 0.55
UBXN11-207ENST00000374223 CXCL9Q07325 125 aa18.47■□□□□ 0.55
UBXN11-207ENST00000374223 DPP8Q6V1X1 898 aaPredicted RBP18.47■□□□□ 0.55
UBXN11-207ENST00000374223 MPNDQ8N594 471 aa18.47■□□□□ 0.55
UBXN11-207ENST00000374223 CCDC85AQ96PX6 553 aaPredicted RBP18.47■□□□□ 0.55
UBXN11-207ENST00000374223 PRDM10Q9NQV6 1147 aa18.47■□□□□ 0.55
UBXN11-207ENST00000374223 FOXN1O15353 648 aa18.46■□□□□ 0.55
UBXN11-207ENST00000374223 TRIM28Q13263 835 aaKnown RBP18.46■□□□□ 0.55
UBXN11-207ENST00000374223 SF3B3Q15393 1217 aaKnown RBP18.46■□□□□ 0.55
UBXN11-207ENST00000374223 GRIPAP1Q4V328 841 aa18.46■□□□□ 0.55
UBXN11-207ENST00000374223 NIM1KQ8IY84 436 aa18.46■□□□□ 0.55
UBXN11-207ENST00000374223 AIDAQ96BJ3 306 aa18.46■□□□□ 0.55
UBXN11-207ENST00000374223 SPINK5Q9NQ38 1064 aaPredicted RBP18.46■□□□□ 0.55
UBXN11-207ENST00000374223 POLR2AP24928 1970 aaKnown RBP18.46■□□□□ 0.55
UBXN11-207ENST00000374223 RAD17O75943 681 aa18.45■□□□□ 0.54
UBXN11-207ENST00000374223 VEGFBP49765 207 aa18.45■□□□□ 0.54
UBXN11-207ENST00000374223 GPSM2P81274 684 aa18.45■□□□□ 0.54
UBXN11-207ENST00000374223 KCNQ5Q9NR82 932 aa18.45■□□□□ 0.54
UBXN11-207ENST00000374223 MYH3P11055 1940 aa18.44■□□□□ 0.54
UBXN11-207ENST00000374223 WTIPA6NIX2 430 aaPredicted RBP18.44■□□□□ 0.54
UBXN11-207ENST00000374223 IGKV5-2P06315 115 aa18.44■□□□□ 0.54
UBXN11-207ENST00000374223 CTCFP49711 727 aaPredicted RBP18.44■□□□□ 0.54
UBXN11-207ENST00000374223 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
UBXN11-207ENST00000374223 CNTROBQ8N137 903 aa18.44■□□□□ 0.54
UBXN11-207ENST00000374223 POLLQ9UGP5 575 aa18.44■□□□□ 0.54
UBXN11-207ENST00000374223 MAP3K2Q9Y2U5 619 aa18.44■□□□□ 0.54
UBXN11-207ENST00000374223 TRPM7Q96QT4 1865 aa18.43■□□□□ 0.54
UBXN11-207ENST00000374223 RASSF10A6NK89 507 aa18.43■□□□□ 0.54
UBXN11-207ENST00000374223 RIMBP2O15034 1052 aa18.43■□□□□ 0.54
UBXN11-207ENST00000374223 CALD1Q05682 793 aaKnown RBP18.43■□□□□ 0.54
UBXN11-207ENST00000374223 KIAA2012Q0VF49 1180 aa18.43■□□□□ 0.54
UBXN11-207ENST00000374223 METTL22Q9BUU2 404 aaPredicted RBP18.43■□□□□ 0.54
UBXN11-207ENST00000374223 PI4KAP2A4QPH2 592 aa18.42■□□□□ 0.54
UBXN11-207ENST00000374223 TRAF5O00463 557 aa18.42■□□□□ 0.54
UBXN11-207ENST00000374223 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
UBXN11-207ENST00000374223 GMPSP49915 693 aaPredicted RBP18.42■□□□□ 0.54
UBXN11-207ENST00000374223 CCDC27Q2M243 656 aa18.42■□□□□ 0.54
UBXN11-207ENST00000374223 CCDC30Q5VVM6 783 aa18.42■□□□□ 0.54
UBXN11-207ENST00000374223 PI4KAP1Q8N8J0 262 aa18.42■□□□□ 0.54
UBXN11-207ENST00000374223 ZBTB38Q8NAP3 1195 aaPredicted RBP18.42■□□□□ 0.54
UBXN11-207ENST00000374223 ZNRF3Q9ULT6 936 aa18.42■□□□□ 0.54
UBXN11-207ENST00000374223 LMOD1P29536 600 aaPredicted RBP18.41■□□□□ 0.54
UBXN11-207ENST00000374223 CWF19L2Q2TBE0 894 aaKnown RBP18.41■□□□□ 0.54
UBXN11-207ENST00000374223 DEFB115Q30KQ5 88 aa18.41■□□□□ 0.54
UBXN11-207ENST00000374223 TWISTNBQ3B726 338 aaPredicted RBP18.41■□□□□ 0.54
UBXN11-207ENST00000374223 DLK2Q6UY11 383 aa18.41■□□□□ 0.54
UBXN11-207ENST00000374223 DBNDD1Q9H9R9 158 aa18.41■□□□□ 0.54
UBXN11-207ENST00000374223 WBP1LQ9NX94 342 aa18.41■□□□□ 0.54
UBXN11-207ENST00000374223 NSFL1CQ9UNZ2 370 aaKnown RBP18.41■□□□□ 0.54
UBXN11-207ENST00000374223 FANCIQ9NVI1 1328 aa18.4■□□□□ 0.54
UBXN11-207ENST00000374223 ANP32CO43423 234 aa18.4■□□□□ 0.54
UBXN11-207ENST00000374223 PCCAP05165 728 aaPredicted RBP18.4■□□□□ 0.54
UBXN11-207ENST00000374223 HIRAP54198 1017 aaPredicted RBP18.4■□□□□ 0.54
UBXN11-207ENST00000374223 DOK7Q18PE1 504 aa18.4■□□□□ 0.54
UBXN11-207ENST00000374223 GPRC5DQ9NZD1 345 aa18.4■□□□□ 0.54
UBXN11-207ENST00000374223 ZBTB12Q9Y330 459 aaPredicted RBP18.4■□□□□ 0.54
UBXN11-207ENST00000374223 RPS8P62241 208 aaKnown RBP18.39■□□□□ 0.53
UBXN11-207ENST00000374223 SUPT20HQ8NEM7 779 aa18.39■□□□□ 0.53
UBXN11-207ENST00000374223 CWC25Q9NXE8 425 aaPredicted RBP18.39■□□□□ 0.53
UBXN11-207ENST00000374223 CACNA1FO60840 1977 aa18.39■□□□□ 0.53
UBXN11-207ENST00000374223 CIAPIN1Q6FI81 312 aa18.38■□□□□ 0.53
UBXN11-207ENST00000374223 KSR2Q6VAB6 950 aa18.38■□□□□ 0.53
UBXN11-207ENST00000374223 CCDC191Q8NCU4 936 aa18.38■□□□□ 0.53
UBXN11-207ENST00000374223 TRPM4Q8TD43 1214 aa18.38■□□□□ 0.53
UBXN11-207ENST00000374223 TMX4Q9H1E5 349 aaPredicted RBP18.38■□□□□ 0.53
UBXN11-207ENST00000374223 RTL9Q8NET4 1388 aa18.37■□□□□ 0.53
UBXN11-207ENST00000374223 WDR33Q9C0J8 1336 aaKnown RBP18.37■□□□□ 0.53
UBXN11-207ENST00000374223 C6orf229H3BNL8 230 aa18.37■□□□□ 0.53
UBXN11-207ENST00000374223 EGFRP00533 1210 aa18.37■□□□□ 0.53
UBXN11-207ENST00000374223 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
UBXN11-207ENST00000374223 MAP2K1Q02750 393 aaPredicted RBP18.37■□□□□ 0.53
UBXN11-207ENST00000374223 EXOSC9Q06265 439 aaKnown RBP18.37■□□□□ 0.53
UBXN11-207ENST00000374223 FAM9BQ8IZU0 186 aa18.37■□□□□ 0.53
UBXN11-207ENST00000374223 TBC1D16Q8TBP0 767 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms