RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 SUPT20HQ8NEM7 779 aa27.93■■■□□ 2.06
CCDC28B-201ENST00000373602 STK31Q9BXU1 1019 aa27.93■■■□□ 2.06
CCDC28B-201ENST00000373602 SALL2Q9Y467 1007 aaPredicted RBP27.93■■■□□ 2.06
CCDC28B-201ENST00000373602 POTEIP0CG38 1075 aa27.92■■■□□ 2.06
CCDC28B-201ENST00000373602 POTEJP0CG39 1038 aa27.92■■■□□ 2.06
CCDC28B-201ENST00000373602 HTRA3P83110 453 aa27.92■■■□□ 2.06
CCDC28B-201ENST00000373602 CHADLQ6NUI6 762 aa27.92■■■□□ 2.06
CCDC28B-201ENST00000373602 FANCIQ9NVI1 1328 aa27.92■■■□□ 2.06
CCDC28B-201ENST00000373602 TAF1P21675 1872 aa27.91■■■□□ 2.06
CCDC28B-201ENST00000373602 PPIP5K2O43314 1243 aa27.91■■■□□ 2.06
CCDC28B-201ENST00000373602 DPP8Q6V1X1 898 aaPredicted RBP27.91■■■□□ 2.06
CCDC28B-201ENST00000373602 KSR2Q6VAB6 950 aa27.91■■■□□ 2.06
CCDC28B-201ENST00000373602 FAM9BQ8IZU0 186 aa27.91■■■□□ 2.06
CCDC28B-201ENST00000373602 MPNDQ8N594 471 aa27.91■■■□□ 2.06
CCDC28B-201ENST00000373602 HACL1Q9UJ83 578 aa27.91■■■□□ 2.06
CCDC28B-201ENST00000373602 MAP3K2Q9Y2U5 619 aa27.91■■■□□ 2.06
CCDC28B-201ENST00000373602 NIM1KQ8IY84 436 aa27.9■■■□□ 2.06
CCDC28B-201ENST00000373602 CWC25Q9NXE8 425 aaPredicted RBP27.9■■■□□ 2.06
CCDC28B-201ENST00000373602 PCCAP05165 728 aaPredicted RBP27.89■■■□□ 2.06
CCDC28B-201ENST00000373602 HSP90B1P14625 803 aaKnown RBP27.89■■■□□ 2.06
CCDC28B-201ENST00000373602 AOC3Q16853 763 aa27.89■■■□□ 2.06
CCDC28B-201ENST00000373602 CELF1Q92879 486 aaKnown RBP27.89■■■□□ 2.06
CCDC28B-201ENST00000373602 PI4KAP2A4QPH2 592 aa27.88■■■□□ 2.05
CCDC28B-201ENST00000373602 LDHDQ86WU2 507 aa27.88■■■□□ 2.05
CCDC28B-201ENST00000373602 PI4KAP1Q8N8J0 262 aa27.88■■■□□ 2.05
CCDC28B-201ENST00000373602 SLC4A2P04920 1241 aa27.87■■■□□ 2.05
CCDC28B-201ENST00000373602 EPHX2P34913 555 aa27.87■■■□□ 2.05
CCDC28B-201ENST00000373602 G2E3Q7L622 706 aa27.87■■■□□ 2.05
CCDC28B-201ENST00000373602 GJA3Q9Y6H8 435 aa27.87■■■□□ 2.05
CCDC28B-201ENST00000373602 LRRC37AA6NMS7 1700 aa27.87■■■□□ 2.05
CCDC28B-201ENST00000373602 KLRG1Q96E93 195 aa27.86■■■□□ 2.05
CCDC28B-201ENST00000373602 VAMP4O75379 141 aa27.85■■■□□ 2.05
CCDC28B-201ENST00000373602 KIAA2012Q0VF49 1180 aa27.85■■■□□ 2.05
CCDC28B-201ENST00000373602 IGKV5-2P06315 115 aa27.84■■■□□ 2.05
CCDC28B-201ENST00000373602 EAPPQ56P03 285 aaPredicted RBP27.84■■■□□ 2.05
CCDC28B-201ENST00000373602 PNMA8AQ86V59 439 aaPredicted RBP27.84■■■□□ 2.05
CCDC28B-201ENST00000373602 JARID2Q92833 1246 aaPredicted RBP27.84■■■□□ 2.05
CCDC28B-201ENST00000373602 ZNRF3Q9ULT6 936 aa27.84■■■□□ 2.05
CCDC28B-201ENST00000373602 COL4A1P02462 1669 aa27.84■■■□□ 2.05
CCDC28B-201ENST00000373602 DUOX1Q9NRD9 1551 aa27.83■■■□□ 2.05
CCDC28B-201ENST00000373602 PDE8AO60658 829 aa27.83■■■□□ 2.05
CCDC28B-201ENST00000373602 RPS8P62241 208 aaKnown RBP27.83■■■□□ 2.05
CCDC28B-201ENST00000373602 EXOSC9Q06265 439 aaKnown RBP27.83■■■□□ 2.05
CCDC28B-201ENST00000373602 NEXNQ0ZGT2 675 aa27.83■■■□□ 2.05
CCDC28B-201ENST00000373602 SPINK5Q9NQ38 1064 aaPredicted RBP27.83■■■□□ 2.05
CCDC28B-201ENST00000373602 CDHR2Q9BYE9 1310 aa27.83■■■□□ 2.05
CCDC28B-201ENST00000373602 ADAMTSL1Q8N6G6 1762 aa27.81■■■□□ 2.04
CCDC28B-201ENST00000373602 SCNN1DP51172 638 aa27.81■■■□□ 2.04
CCDC28B-201ENST00000373602 CXCL9Q07325 125 aa27.81■■■□□ 2.04
CCDC28B-201ENST00000373602 FLIIQ13045 1269 aa27.81■■■□□ 2.04
CCDC28B-201ENST00000373602 CCDC152Q4G0S7 254 aa27.81■■■□□ 2.04
CCDC28B-201ENST00000373602 SEC31BQ9NQW1 1179 aa27.81■■■□□ 2.04
CCDC28B-201ENST00000373602 NSFL1CQ9UNZ2 370 aaKnown RBP27.81■■■□□ 2.04
CCDC28B-201ENST00000373602 LMOD1P29536 600 aaPredicted RBP27.8■■■□□ 2.04
CCDC28B-201ENST00000373602 LTBP1Q14766 1721 aa27.8■■■□□ 2.04
CCDC28B-201ENST00000373602 NEURL1BA8MQ27 555 aa27.79■■■□□ 2.04
CCDC28B-201ENST00000373602 CWF19L2Q2TBE0 894 aaKnown RBP27.79■■■□□ 2.04
CCDC28B-201ENST00000373602 MYH16Q9H6N6 1097 aa27.79■■■□□ 2.04
CCDC28B-201ENST00000373602 CLEC11AQ9Y240 323 aa27.79■■■□□ 2.04
CCDC28B-201ENST00000373602 PASKQ96RG2 1323 aa27.78■■■□□ 2.04
CCDC28B-201ENST00000373602 EPS15P42566 896 aa27.78■■■□□ 2.04
CCDC28B-201ENST00000373602 GPSM2P81274 684 aa27.78■■■□□ 2.04
CCDC28B-201ENST00000373602 JMYQ8N9B5 988 aa27.78■■■□□ 2.04
CCDC28B-201ENST00000373602 CACNA1FO60840 1977 aa27.78■■■□□ 2.04
CCDC28B-201ENST00000373602 ITGBL1O95965 494 aaPredicted RBP27.77■■■□□ 2.04
CCDC28B-201ENST00000373602 POLLQ9UGP5 575 aa27.77■■■□□ 2.04
CCDC28B-201ENST00000373602 FKBP5Q13451 457 aaPredicted RBP27.76■■■□□ 2.03
CCDC28B-201ENST00000373602 WASHC4Q2M389 1173 aa27.76■■■□□ 2.03
CCDC28B-201ENST00000373602 CIAPIN1Q6FI81 312 aa27.76■■■□□ 2.03
CCDC28B-201ENST00000373602 DNAAF4Q8WXU2 420 aa27.75■■■□□ 2.03
CCDC28B-201ENST00000373602 CCDC85AQ96PX6 553 aaPredicted RBP27.75■■■□□ 2.03
CCDC28B-201ENST00000373602 CREBZFQ9NS37 354 aa27.75■■■□□ 2.03
CCDC28B-201ENST00000373602 ZNF521Q96K83 1311 aa27.74■■■□□ 2.03
CCDC28B-201ENST00000373602 YDJCA8MPS7 323 aa27.74■■■□□ 2.03
CCDC28B-201ENST00000373602 C6orf229H3BNL8 230 aa27.74■■■□□ 2.03
CCDC28B-201ENST00000373602 H7C1W4 665 aa27.74■■■□□ 2.03
CCDC28B-201ENST00000373602 CTSWP56202 376 aa27.74■■■□□ 2.03
CCDC28B-201ENST00000373602 PODXL2Q9NZ53 605 aa27.74■■■□□ 2.03
CCDC28B-201ENST00000373602 GPRC5DQ9NZD1 345 aa27.74■■■□□ 2.03
CCDC28B-201ENST00000373602 RAD17O75943 681 aa27.73■■■□□ 2.03
CCDC28B-201ENST00000373602 GCKRQ14397 625 aa27.73■■■□□ 2.03
CCDC28B-201ENST00000373602 TNIP1Q15025 636 aa27.73■■■□□ 2.03
CCDC28B-201ENST00000373602 MAP1SQ66K74 1059 aaPredicted RBP27.73■■■□□ 2.03
CCDC28B-201ENST00000373602 USP50Q70EL3 339 aaPredicted RBP27.73■■■□□ 2.03
CCDC28B-201ENST00000373602 CNTROBQ8N137 903 aa27.73■■■□□ 2.03
CCDC28B-201ENST00000373602 TTLL11Q8NHH1 800 aa27.73■■■□□ 2.03
CCDC28B-201ENST00000373602 TBC1D16Q8TBP0 767 aa27.73■■■□□ 2.03
CCDC28B-201ENST00000373602 EYA3Q99504 573 aa27.73■■■□□ 2.03
CCDC28B-201ENST00000373602 GMPSP49915 693 aaPredicted RBP27.72■■■□□ 2.03
CCDC28B-201ENST00000373602 RIMBP2O15034 1052 aa27.71■■■□□ 2.03
CCDC28B-201ENST00000373602 UBE3BQ7Z3V4 1068 aa27.71■■■□□ 2.03
CCDC28B-201ENST00000373602 ANKRD18AQ8IVF6 992 aa27.71■■■□□ 2.03
CCDC28B-201ENST00000373602 LINS1Q8NG48 757 aa27.71■■■□□ 2.03
CCDC28B-201ENST00000373602 CDC5LQ99459 802 aaKnown RBP27.7■■■□□ 2.02
CCDC28B-201ENST00000373602 DBNDD1Q9H9R9 158 aa27.7■■■□□ 2.02
CCDC28B-201ENST00000373602 ADARB2Q9NS39 739 aaKnown RBP27.7■■■□□ 2.02
CCDC28B-201ENST00000373602 RTL9Q8NET4 1388 aa27.7■■■□□ 2.02
CCDC28B-201ENST00000373602 PLA2G12BQ9BX93 195 aa27.69■■■□□ 2.02
CCDC28B-201ENST00000373602 BCL2L13Q9BXK5 485 aa27.69■■■□□ 2.02
CCDC28B-201ENST00000373602 GREM2Q9H772 168 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms