RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 FYCO1Q9BQS8 1478 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 PDE4BQ07343 736 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 TBC1D31Q96DN5 1066 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 AKR1B10O60218 316 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 FAM184BQ9ULE4 1060 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 SARNPP82979 210 aaKnown RBP10.3□□□□□ -0.76
PTPRT-206ENST00000373198 GNAT3A8MTJ3 354 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 KIF3CO14782 793 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 TSPY3P0CV98 308 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 TSPY8P0CW00 308 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 HMGB2P26583 209 aaKnown RBP10.3□□□□□ -0.76
PTPRT-206ENST00000373198 DIXDC1Q155Q3 683 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 HEATR3Q7Z4Q2 680 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 NACA2Q9H009 215 aa10.3□□□□□ -0.76
PTPRT-206ENST00000373198 HSPA1LP34931 641 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 CCDC170Q8IYT3 715 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 RNF34Q969K3 372 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 KIFC2Q96AC6 838 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 STX8Q9UNK0 236 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 FAM160A1Q05DH4 1040 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 STX1AQ16623 288 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 RIOK3O14730 519 aaKnown RBP10.29□□□□□ -0.76
PTPRT-206ENST00000373198 AFMP43652 599 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 NOP9Q86U38 636 aaKnown RBP10.29□□□□□ -0.76
PTPRT-206ENST00000373198 CCDC8Q9H0W5 538 aaPredicted RBP10.29□□□□□ -0.76
PTPRT-206ENST00000373198 E7EVH7 732 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 HARSP12081 509 aaKnown RBP10.29□□□□□ -0.76
PTPRT-206ENST00000373198 STAT6P42226 847 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 MIPOL1Q8TD10 442 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 TRIM7Q9C029 511 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 ATRIPQ8WXE1 791 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 KCNK9Q9NPC2 374 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 NOC2LQ9Y3T9 749 aaKnown RBP10.29□□□□□ -0.76
PTPRT-206ENST00000373198 MCM4P33991 863 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 CAPZA3Q96KX2 299 aa10.29□□□□□ -0.76
PTPRT-206ENST00000373198 MFSD6Q6ZSS7 791 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 BANK1Q8NDB2 785 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 SPAG5Q96R06 1193 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 GSDMBQ8TAX9 411 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 NOD1Q9Y239 953 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 PICALMQ13492 652 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 SPOUT1Q5T280 376 aaKnown RBP10.28□□□□□ -0.76
PTPRT-206ENST00000373198 PPP1R21Q6ZMI0 780 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 DACT3Q96B18 629 aaPredicted RBP10.28□□□□□ -0.76
PTPRT-206ENST00000373198 POTEB2H3BUK9 544 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 NUMA1Q14980 2115 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 AFG3L2Q9Y4W6 797 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 ATP2A1O14983 1001 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 N4BP3O15049 544 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 ANKLE2Q86XL3 938 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 CCDC88BA6NC98 1476 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 MICALL1Q8N3F8 863 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 KIF1BPQ96EK5 621 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 ANKFY1Q9P2R3 1169 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 TACC3Q9Y6A5 838 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 PDE1CQ14123 709 aaPredicted RBP10.28□□□□□ -0.76
PTPRT-206ENST00000373198 USP37Q86T82 979 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 SEC62Q99442 399 aaKnown RBP10.28□□□□□ -0.76
PTPRT-206ENST00000373198 CCDC77Q9BR77 488 aa10.28□□□□□ -0.76
PTPRT-206ENST00000373198 TRIM6Q9C030 488 aaPredicted RBP10.28□□□□□ -0.76
PTPRT-206ENST00000373198 SNW1Q13573 536 aaKnown RBP10.27□□□□□ -0.76
PTPRT-206ENST00000373198 ZBTB24O43167 697 aaPredicted RBP10.27□□□□□ -0.77
PTPRT-206ENST00000373198 MCM10Q7L590 875 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 CEP120Q8N960 986 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 RTEL1-TNFRSF6BF6WH68 1400 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 NBPF6Q5VWK0 638 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 NBPF5PQ86XG9 351 aaPredicted RBP10.27□□□□□ -0.77
PTPRT-206ENST00000373198 KIAA1524Q8TCG1 905 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 NBPF4Q96M43 638 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 KRT5P13647 590 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 GNG11P61952 73 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 VPS52Q8N1B4 723 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 SNRKQ9NRH2 765 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 HDAC9Q9UKV0 1011 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 MCM6Q14566 821 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 PPP1R7Q15435 360 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 DUSP27Q5VZP5 1158 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 ZNF408Q9H9D4 720 aa10.27□□□□□ -0.77
PTPRT-206ENST00000373198 TFIP11Q9UBB9 837 aaKnown RBP10.26□□□□□ -0.77
PTPRT-206ENST00000373198 RAPGEF2Q9Y4G8 1499 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 CTAGE5O15320 804 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 USP25Q9UHP3 1055 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 WDR63Q8IWG1 891 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 THEMISQ8N1K5 641 aaPredicted RBP10.26□□□□□ -0.77
PTPRT-206ENST00000373198 USP16Q9Y5T5 823 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 RAB11FIP3O75154 756 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 PPP2R1AP30153 589 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 RFC1P35251 1148 aaPredicted RBP10.26□□□□□ -0.77
PTPRT-206ENST00000373198 KRT9P35527 623 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 CDC5LQ99459 802 aaKnown RBP10.26□□□□□ -0.77
PTPRT-206ENST00000373198 METAP2P50579 478 aaKnown RBP eCLIP10.26□□□□□ -0.77
PTPRT-206ENST00000373198 OGFOD1Q8N543 542 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 AGTPBP1Q9UPW5 1226 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 GOLIM4O00461 696 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 GIPC1O14908 333 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 CIB2O75838 187 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 FCHSD2O94868 740 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 DNAJC21Q5F1R6 531 aaKnown RBP10.26□□□□□ -0.77
PTPRT-206ENST00000373198 RRAGBQ5VZM2 374 aa10.26□□□□□ -0.77
PTPRT-206ENST00000373198 GINS2Q9Y248 185 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 563 ms