RNA–Protein interactions for RNA: ENST00000371723.4

SDCCAG3-203, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-203ENST00000371723 COL4A1P02462 1669 aa33.11■■■□□ 2.89
SDCCAG3-203ENST00000371723 LINS1Q8NG48 757 aa33.11■■■□□ 2.89
SDCCAG3-203ENST00000371723 F6X3S4 739 aa33.1■■■□□ 2.89
SDCCAG3-203ENST00000371723 PDE8AO60658 829 aa33.1■■■□□ 2.89
SDCCAG3-203ENST00000371723 ZNF277Q9NRM2 450 aaPredicted RBP33.1■■■□□ 2.89
SDCCAG3-203ENST00000371723 GCKRQ14397 625 aa33.09■■■□□ 2.89
SDCCAG3-203ENST00000371723 SP8Q8IXZ3 490 aa33.09■■■□□ 2.89
SDCCAG3-203ENST00000371723 MRPL50Q8N5N7 158 aaKnown RBP33.09■■■□□ 2.89
SDCCAG3-203ENST00000371723 H7C1W4 665 aa33.08■■■□□ 2.89
SDCCAG3-203ENST00000371723 KDM2BQ8NHM5 1336 aa33.07■■■□□ 2.88
SDCCAG3-203ENST00000371723 KIF3CO14782 793 aa33.07■■■□□ 2.88
SDCCAG3-203ENST00000371723 SSH1Q8WYL5 1049 aa33.07■■■□□ 2.88
SDCCAG3-203ENST00000371723 GLTPD2A6NH11 291 aa33.06■■■□□ 2.88
SDCCAG3-203ENST00000371723 BEND3Q5T5X7 828 aa33.06■■■□□ 2.88
SDCCAG3-203ENST00000371723 TMC4Q7Z404 712 aa33.06■■■□□ 2.88
SDCCAG3-203ENST00000371723 CELF1Q92879 486 aaKnown RBP33.06■■■□□ 2.88
SDCCAG3-203ENST00000371723 NMRK2Q9NPI5 230 aa33.06■■■□□ 2.88
SDCCAG3-203ENST00000371723 IARSP41252 1262 aaKnown RBP33.05■■■□□ 2.88
SDCCAG3-203ENST00000371723 TMX4Q9H1E5 349 aaPredicted RBP33.05■■■□□ 2.88
SDCCAG3-203ENST00000371723 CT47B1P0C2W7 299 aaPredicted RBP33.04■■■□□ 2.88
SDCCAG3-203ENST00000371723 UBE3BQ7Z3V4 1068 aa33.04■■■□□ 2.88
SDCCAG3-203ENST00000371723 CASP7P55210 303 aa33.03■■■□□ 2.88
SDCCAG3-203ENST00000371723 ALDH1L2Q3SY69 923 aa33.03■■■□□ 2.88
SDCCAG3-203ENST00000371723 CCDC152Q4G0S7 254 aa33.03■■■□□ 2.88
SDCCAG3-203ENST00000371723 HNRNPUQ00839 825 aaKnown RBP eCLIP33.02■■■□□ 2.88
SDCCAG3-203ENST00000371723 SEC31BQ9NQW1 1179 aa33.02■■■□□ 2.88
SDCCAG3-203ENST00000371723 CTSWP56202 376 aa33.01■■■□□ 2.87
SDCCAG3-203ENST00000371723 C1QTNF8P60827 252 aa33.01■■■□□ 2.87
SDCCAG3-203ENST00000371723 WDR90Q96KV7 1748 aa33.01■■■□□ 2.87
SDCCAG3-203ENST00000371723 COL4A5P29400 1685 aa33.01■■■□□ 2.87
SDCCAG3-203ENST00000371723 RPS8P62241 208 aaKnown RBP33■■■□□ 2.87
SDCCAG3-203ENST00000371723 TTLL11Q8NHH1 800 aa33■■■□□ 2.87
SDCCAG3-203ENST00000371723 PLA2G12BQ9BX93 195 aa33■■■□□ 2.87
SDCCAG3-203ENST00000371723 RTFDC1Q9BY42 306 aaPredicted RBP33■■■□□ 2.87
SDCCAG3-203ENST00000371723 PTPRCP08575 1304 aa33■■■□□ 2.87
SDCCAG3-203ENST00000371723 LTBP1Q14766 1721 aa32.99■■■□□ 2.87
SDCCAG3-203ENST00000371723 DPY19L2Q6NUT2 758 aa32.99■■■□□ 2.87
SDCCAG3-203ENST00000371723 BCL2L13Q9BXK5 485 aa32.99■■■□□ 2.87
SDCCAG3-203ENST00000371723 SPEF2Q9C093 1822 aa32.98■■■□□ 2.87
SDCCAG3-203ENST00000371723 MPNDQ8N594 471 aa32.98■■■□□ 2.87
SDCCAG3-203ENST00000371723 CCDC85AQ96PX6 553 aaPredicted RBP32.98■■■□□ 2.87
SDCCAG3-203ENST00000371723 RRAGCQ9HB90 399 aa32.98■■■□□ 2.87
SDCCAG3-203ENST00000371723 DUOX1Q9NRD9 1551 aa32.98■■■□□ 2.87
SDCCAG3-203ENST00000371723 DPP8Q6V1X1 898 aaPredicted RBP32.97■■■□□ 2.87
SDCCAG3-203ENST00000371723 RTL9Q8NET4 1388 aa32.96■■■□□ 2.87
SDCCAG3-203ENST00000371723 ALDH1L1O75891 902 aa32.96■■■□□ 2.87
SDCCAG3-203ENST00000371723 SLC4A10Q6U841 1118 aa32.96■■■□□ 2.87
SDCCAG3-203ENST00000371723 VPS33BQ9H267 617 aa32.96■■■□□ 2.87
SDCCAG3-203ENST00000371723 FZD9O00144 591 aa32.95■■■□□ 2.87
SDCCAG3-203ENST00000371723 SUPT20HQ8NEM7 779 aa32.95■■■□□ 2.87
SDCCAG3-203ENST00000371723 SMC4Q9NTJ3 1288 aa32.95■■■□□ 2.87
SDCCAG3-203ENST00000371723 JDP2Q8WYK2 163 aa32.94■■■□□ 2.86
SDCCAG3-203ENST00000371723 SRCIN1Q9C0H9 1055 aa32.94■■■□□ 2.86
SDCCAG3-203ENST00000371723 GREM2Q9H772 168 aa32.94■■■□□ 2.86
SDCCAG3-203ENST00000371723 LARGE2Q8N3Y3 721 aa32.93■■■□□ 2.86
SDCCAG3-203ENST00000371723 GRM8O00222 908 aa32.92■■■□□ 2.86
SDCCAG3-203ENST00000371723 DDNO94850 711 aaPredicted RBP32.92■■■□□ 2.86
SDCCAG3-203ENST00000371723 BRPF1P55201 1214 aaPredicted RBP32.92■■■□□ 2.86
SDCCAG3-203ENST00000371723 ZNF541Q9H0D2 1346 aa32.92■■■□□ 2.86
SDCCAG3-203ENST00000371723 SCN4AP35499 1836 aa32.91■■■□□ 2.86
SDCCAG3-203ENST00000371723 POTECB2RU33 542 aa32.91■■■□□ 2.86
SDCCAG3-203ENST00000371723 PPIP5K2O43314 1243 aa32.91■■■□□ 2.86
SDCCAG3-203ENST00000371723 CSF1RP07333 972 aa32.91■■■□□ 2.86
SDCCAG3-203ENST00000371723 TOMM70O94826 608 aa32.9■■■□□ 2.86
SDCCAG3-203ENST00000371723 VEGFAP15692 232 aaPredicted RBP32.9■■■□□ 2.86
SDCCAG3-203ENST00000371723 GPSM2P81274 684 aa32.9■■■□□ 2.86
SDCCAG3-203ENST00000371723 AOC3Q16853 763 aa32.9■■■□□ 2.86
SDCCAG3-203ENST00000371723 ANKRD18AQ8IVF6 992 aa32.9■■■□□ 2.86
SDCCAG3-203ENST00000371723 CDC5LQ99459 802 aaKnown RBP32.9■■■□□ 2.86
SDCCAG3-203ENST00000371723 NSFL1CQ9UNZ2 370 aaKnown RBP32.9■■■□□ 2.86
SDCCAG3-203ENST00000371723 RARSP54136 660 aaKnown RBP32.89■■■□□ 2.86
SDCCAG3-203ENST00000371723 FOXO4P98177 505 aa32.88■■■□□ 2.85
SDCCAG3-203ENST00000371723 KIAA2012Q0VF49 1180 aa32.88■■■□□ 2.85
SDCCAG3-203ENST00000371723 C9orf78Q9NZ63 289 aaPredicted RBP32.88■■■□□ 2.85
SDCCAG3-203ENST00000371723 ZBED9Q6R2W3 1325 aa32.87■■■□□ 2.85
SDCCAG3-203ENST00000371723 L3MBTL3Q96JM7 780 aaPredicted RBP32.87■■■□□ 2.85
SDCCAG3-203ENST00000371723 PODXL2Q9NZ53 605 aa32.87■■■□□ 2.85
SDCCAG3-203ENST00000371723 FAM161AQ3B820 660 aa32.86■■■□□ 2.85
SDCCAG3-203ENST00000371723 NIM1KQ8IY84 436 aa32.86■■■□□ 2.85
SDCCAG3-203ENST00000371723 POLLQ9UGP5 575 aa32.86■■■□□ 2.85
SDCCAG3-203ENST00000371723 UTYO14607 1347 aa32.85■■■□□ 2.85
SDCCAG3-203ENST00000371723 C16orf71Q8IYS4 520 aaPredicted RBP32.85■■■□□ 2.85
SDCCAG3-203ENST00000371723 ITGA6P23229 1130 aa32.84■■■□□ 2.85
SDCCAG3-203ENST00000371723 EIF6P56537 245 aaKnown RBP32.84■■■□□ 2.85
SDCCAG3-203ENST00000371723 TBC1D16Q8TBP0 767 aa32.84■■■□□ 2.85
SDCCAG3-203ENST00000371723 RBM46Q8TBY0 533 aaKnown RBP32.84■■■□□ 2.85
SDCCAG3-203ENST00000371723 BSDC1Q9NW68 430 aaPredicted RBP32.84■■■□□ 2.85
SDCCAG3-203ENST00000371723 NOB1Q9ULX3 412 aaKnown RBP32.84■■■□□ 2.85
SDCCAG3-203ENST00000371723 EPHA10Q5JZY3 1008 aa32.83■■■□□ 2.85
SDCCAG3-203ENST00000371723 GPC2Q8N158 579 aa32.83■■■□□ 2.85
SDCCAG3-203ENST00000371723 ZNRF3Q9ULT6 936 aa32.82■■■□□ 2.84
SDCCAG3-203ENST00000371723 C6orf229H3BNL8 230 aa32.81■■■□□ 2.84
SDCCAG3-203ENST00000371723 NBPF7P0C2Y1 421 aaPredicted RBP32.81■■■□□ 2.84
SDCCAG3-203ENST00000371723 WASHC4Q2M389 1173 aa32.81■■■□□ 2.84
SDCCAG3-203ENST00000371723 ANKIB1Q9P2G1 1089 aa32.81■■■□□ 2.84
SDCCAG3-203ENST00000371723 KAZALD1Q96I82 304 aa32.8■■■□□ 2.84
SDCCAG3-203ENST00000371723 IGHMBP2P38935 993 aaKnown RBP32.79■■■□□ 2.84
SDCCAG3-203ENST00000371723 LMBR1LQ6UX01 489 aa32.79■■■□□ 2.84
SDCCAG3-203ENST00000371723 SUCLG2Q96I99 432 aa32.79■■■□□ 2.84
SDCCAG3-203ENST00000371723 EYA3Q99504 573 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms