RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 GPR108Q9NPR9 543 aa21.4■■□□□ 1.02
SSBP3-203ENST00000371319 DBNLQ9UJU6 430 aaKnown RBP21.4■■□□□ 1.02
SSBP3-203ENST00000371319 CCDC85AQ96PX6 553 aaPredicted RBP21.39■■□□□ 1.01
SSBP3-203ENST00000371319 UTP14AQ9BVJ6 771 aaKnown RBP21.39■■□□□ 1.01
SSBP3-203ENST00000371319 FBXO3Q9UK99 471 aa21.39■■□□□ 1.01
SSBP3-203ENST00000371319 ZNF609O15014 1411 aa21.38■■□□□ 1.01
SSBP3-203ENST00000371319 RGL2O15211 777 aa21.38■■□□□ 1.01
SSBP3-203ENST00000371319 REC8O95072 547 aa21.38■■□□□ 1.01
SSBP3-203ENST00000371319 IFIT5Q13325 482 aaKnown RBP21.38■■□□□ 1.01
SSBP3-203ENST00000371319 CLEC4GQ6UXB4 293 aa21.38■■□□□ 1.01
SSBP3-203ENST00000371319 ERICH6Q7L0X2 663 aa21.38■■□□□ 1.01
SSBP3-203ENST00000371319 KRT27Q7Z3Y8 459 aa21.38■■□□□ 1.01
SSBP3-203ENST00000371319 AK7Q96M32 723 aa21.38■■□□□ 1.01
SSBP3-203ENST00000371319 GREM2Q9H772 168 aa21.38■■□□□ 1.01
SSBP3-203ENST00000371319 ZNF652Q9Y2D9 606 aa21.38■■□□□ 1.01
SSBP3-203ENST00000371319 LRP5O75197 1615 aa21.37■■□□□ 1.01
SSBP3-203ENST00000371319 NTSR2O95665 410 aa21.37■■□□□ 1.01
SSBP3-203ENST00000371319 FAM196AQ6ZSG2 479 aa21.37■■□□□ 1.01
SSBP3-203ENST00000371319 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
SSBP3-203ENST00000371319 NIP7Q9Y221 180 aaKnown RBP eCLIP21.37■■□□□ 1.01
SSBP3-203ENST00000371319 SH3TC1Q8TE82 1336 aa21.37■■□□□ 1.01
SSBP3-203ENST00000371319 BECN1Q14457 450 aa21.36■■□□□ 1.01
SSBP3-203ENST00000371319 DBNDD2Q9BQY9 259 aa21.36■■□□□ 1.01
SSBP3-203ENST00000371319 ITGA6P23229 1130 aa21.36■■□□□ 1.01
SSBP3-203ENST00000371319 ZNF772Q68DY9 489 aaPredicted RBP21.36■■□□□ 1.01
SSBP3-203ENST00000371319 EVI5LQ96CN4 794 aa21.36■■□□□ 1.01
SSBP3-203ENST00000371319 BCL2L12Q9HB09 334 aa21.36■■□□□ 1.01
SSBP3-203ENST00000371319 C4AP0C0L4 1744 aa21.35■■□□□ 1.01
SSBP3-203ENST00000371319 COL24A1Q17RW2 1714 aa21.35■■□□□ 1.01
SSBP3-203ENST00000371319 FAM177BA6PVY3 158 aa21.35■■□□□ 1.01
SSBP3-203ENST00000371319 GNPATO15228 680 aa21.35■■□□□ 1.01
SSBP3-203ENST00000371319 ATP5JP18859 108 aa21.35■■□□□ 1.01
SSBP3-203ENST00000371319 TBC1D2Q9BYX2 928 aa21.35■■□□□ 1.01
SSBP3-203ENST00000371319 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
SSBP3-203ENST00000371319 RIC1Q4ADV7 1423 aa21.35■■□□□ 1.01
SSBP3-203ENST00000371319 ANKRD18BA2A2Z9 1011 aa21.34■■□□□ 1.01
SSBP3-203ENST00000371319 RBM6P78332 1123 aaKnown RBP21.34■■□□□ 1.01
SSBP3-203ENST00000371319 TAF7LQ5H9L4 462 aa21.34■■□□□ 1.01
SSBP3-203ENST00000371319 AMIGO3Q86WK7 504 aa21.34■■□□□ 1.01
SSBP3-203ENST00000371319 IL25Q9H293 177 aa21.34■■□□□ 1.01
SSBP3-203ENST00000371319 BOLA2Q9H3K6 86 aa21.34■■□□□ 1.01
SSBP3-203ENST00000371319 NARFQ9UHQ1 456 aa21.34■■□□□ 1.01
SSBP3-203ENST00000371319 CASZ1Q86V15 1759 aa21.33■■□□□ 1.01
SSBP3-203ENST00000371319 HCLS1P14317 486 aaPredicted RBP21.33■■□□□ 1.01
SSBP3-203ENST00000371319 LRRC4BQ9NT99 713 aa21.32■■□□□ 1
SSBP3-203ENST00000371319 CEP126Q9P2H0 1117 aa21.32■■□□□ 1
SSBP3-203ENST00000371319 RTCBQ9Y3I0 505 aaKnown RBP21.32■■□□□ 1
SSBP3-203ENST00000371319 RIPOR2Q9Y4F9 1068 aa21.32■■□□□ 1
SSBP3-203ENST00000371319 USPL1Q5W0Q7 1092 aa21.31■■□□□ 1
SSBP3-203ENST00000371319 SRP68Q9UHB9 627 aaKnown RBP21.31■■□□□ 1
SSBP3-203ENST00000371319 SGSM2O43147 1006 aa21.31■■□□□ 1
SSBP3-203ENST00000371319 TIMM10P62072 90 aa21.31■■□□□ 1
SSBP3-203ENST00000371319 TBC1D9BQ66K14 1250 aa21.31■■□□□ 1
SSBP3-203ENST00000371319 A0A1B0GUL7 405 aa21.3■■□□□ 1
SSBP3-203ENST00000371319 ARHGEF1Q92888 912 aaKnown RBP21.3■■□□□ 1
SSBP3-203ENST00000371319 SNX21Q969T3 373 aa21.3■■□□□ 1
SSBP3-203ENST00000371319 NEUROD6Q96NK8 337 aa21.3■■□□□ 1
SSBP3-203ENST00000371319 UBR3Q6ZT12 1888 aa21.3■■□□□ 1
SSBP3-203ENST00000371319 RTL9Q8NET4 1388 aa21.3■■□□□ 1
SSBP3-203ENST00000371319 TRIM37O94972 964 aa21.29■■□□□ 1
SSBP3-203ENST00000371319 SPEF2Q9C093 1822 aa21.29■■□□□ 1
SSBP3-203ENST00000371319 EPB41L2O43491 1005 aaKnown RBP21.28■■□□□ 1
SSBP3-203ENST00000371319 HSP90B1P14625 803 aaKnown RBP21.28■■□□□ 1
SSBP3-203ENST00000371319 LDHAL6AQ6ZMR3 332 aa21.28■■□□□ 1
SSBP3-203ENST00000371319 HAUS7Q99871 368 aa21.28■■□□□ 1
SSBP3-203ENST00000371319 DIAPH3Q9NSV4 1193 aa21.28■■□□□ 1
SSBP3-203ENST00000371319 AKAP2Q9Y2D5 859 aa21.28■■□□□ 1
SSBP3-203ENST00000371319 ZPR1O75312 459 aa21.27■■□□□ 1
SSBP3-203ENST00000371319 ERFEQ4G0M1 354 aa21.27■■□□□ 1
SSBP3-203ENST00000371319 ANO2Q9NQ90 1003 aa21.27■■□□□ 1
SSBP3-203ENST00000371319 METTL24Q5JXM2 366 aa21.27■□□□□ 0.99
SSBP3-203ENST00000371319 SLC27A3Q5K4L6 730 aa21.27■□□□□ 0.99
SSBP3-203ENST00000371319 CWC27Q6UX04 472 aaKnown RBP21.27■□□□□ 0.99
SSBP3-203ENST00000371319 VGLL2Q8N8G2 317 aa21.27■□□□□ 0.99
SSBP3-203ENST00000371319 EDC3Q96F86 508 aaKnown RBP21.27■□□□□ 0.99
SSBP3-203ENST00000371319 COL4A1P02462 1669 aa21.26■□□□□ 0.99
SSBP3-203ENST00000371319 HIP1O00291 1037 aa21.26■□□□□ 0.99
SSBP3-203ENST00000371319 RABEP1Q15276 862 aa21.26■□□□□ 0.99
SSBP3-203ENST00000371319 CCDC152Q4G0S7 254 aa21.26■□□□□ 0.99
SSBP3-203ENST00000371319 BICDL1Q6ZP65 573 aa21.26■□□□□ 0.99
SSBP3-203ENST00000371319 LSG1Q9H089 658 aaKnown RBP21.26■□□□□ 0.99
SSBP3-203ENST00000371319 CNNM1Q9NRU3 951 aa21.26■□□□□ 0.99
SSBP3-203ENST00000371319 ARAP2Q8WZ64 1704 aa21.25■□□□□ 0.99
SSBP3-203ENST00000371319 RFX7Q2KHR2 1363 aa21.25■□□□□ 0.99
SSBP3-203ENST00000371319 ADORA1P30542 326 aa21.25■□□□□ 0.99
SSBP3-203ENST00000371319 HSCBQ8IWL3 235 aa21.25■□□□□ 0.99
SSBP3-203ENST00000371319 RUFY2Q8WXA3 655 aa21.25■□□□□ 0.99
SSBP3-203ENST00000371319 FSD1Q9BTV5 496 aa21.25■□□□□ 0.99
SSBP3-203ENST00000371319 SEC31BQ9NQW1 1179 aa21.25■□□□□ 0.99
SSBP3-203ENST00000371319 NDUFB9Q9Y6M9 179 aa21.25■□□□□ 0.99
SSBP3-203ENST00000371319 ABCC12Q96J65 1359 aa21.24■□□□□ 0.99
SSBP3-203ENST00000371319 NMIQ13287 307 aaPredicted RBP21.24■□□□□ 0.99
SSBP3-203ENST00000371319 SLC10A5Q5PT55 438 aa21.24■□□□□ 0.99
SSBP3-203ENST00000371319 TRAPPC3LQ5T215 181 aa21.24■□□□□ 0.99
SSBP3-203ENST00000371319 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.24■□□□□ 0.99
SSBP3-203ENST00000371319 IL17RAQ96F46 866 aa21.24■□□□□ 0.99
SSBP3-203ENST00000371319 XAGE2Q96GT9 111 aa21.24■□□□□ 0.99
SSBP3-203ENST00000371319 RAD50Q92878 1312 aa21.23■□□□□ 0.99
SSBP3-203ENST00000371319 PHF14O94880 888 aa21.23■□□□□ 0.99
SSBP3-203ENST00000371319 CD2BP2O95400 341 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms