RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 MCM2P49736 904 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 TEFQ10587 303 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 NEUROD6Q96NK8 337 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 ORC3Q9UBD5 711 aaPredicted RBP10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 SMC3Q9UQE7 1217 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 NSD2O96028 1365 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 ME3Q16798 604 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 ARMCX5Q6P1M9 558 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 LRRFIP2Q9Y608 721 aaKnown RBP10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 NFE2L2Q16236 605 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 GORABQ5T7V8 394 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 TRIM65Q6PJ69 517 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 RASSF4Q9H2L5 321 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 KCND1Q9NSA2 647 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 MYH15Q9Y2K3 1946 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 CCDC69A6NI79 296 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 UBTFL1P0CB47 393 aaPredicted RBP10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 PTPN14Q15678 1187 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 LRRC2Q9BYS8 371 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 NDUFB9Q9Y6M9 179 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 XRN1Q8IZH2 1706 aaKnown RBP10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 SRGAP3O43295 1099 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 CASQ1P31415 396 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 ZSCAN26Q16670 478 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 ARHGAP29Q52LW3 1261 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 PPP1R13BQ96KQ4 1090 aa10.28□□□□□ -0.76
SMARCA1-203ENST00000371123 MAP3K11Q16584 847 aa10.27□□□□□ -0.76
SMARCA1-203ENST00000371123 RPAP2Q8IXW5 612 aaPredicted RBP10.27□□□□□ -0.76
SMARCA1-203ENST00000371123 FAM177A1Q8N128 213 aaPredicted RBP10.27□□□□□ -0.76
SMARCA1-203ENST00000371123 CCDC191Q8NCU4 936 aa10.27□□□□□ -0.76
SMARCA1-203ENST00000371123 OAS2P29728 719 aaKnown RBP10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 PTH1RQ03431 593 aa10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 ICE2Q659A1 982 aa10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 CCDC34Q96HJ3 373 aa10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 CCDC8Q9H0W5 538 aaPredicted RBP10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 RIMS2Q9UQ26 1411 aa10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 H3BQV1 296 aa10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 FCHSD2O94868 740 aa10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 PTPN21Q16825 1174 aa10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 IFFO2Q5TF58 517 aa10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 HDGFL1Q5TGJ6 251 aa10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 ISM2Q6H9L7 571 aa10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 FTOQ9C0B1 505 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 RRP15Q9Y3B9 282 aaKnown RBP10.27□□□□□ -0.77
SMARCA1-203ENST00000371123 NEDD4P46934 1319 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 CDC25BP30305 580 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 ABTB2Q8N961 1025 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 NUP62CLQ9H1M0 184 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 GOLPH3LQ9H4A5 285 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 TPCN1Q9ULQ1 816 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 GOLGA6L6A8MZA4 724 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 N4BP1O75113 896 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 GUCY2CP25092 1073 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 ZNF165P49910 485 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 DHX37Q8IY37 1157 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 PI4K2BQ8TCG2 481 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 CFAP44Q96MT7 982 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 GNL2Q13823 731 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 CLSTN2Q9H4D0 955 aa10.26□□□□□ -0.77
SMARCA1-203ENST00000371123 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.26□□□□□ -0.772e-6■□□□□ 9.7
SMARCA1-203ENST00000371123 SSH2Q76I76 1423 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 TADA3O75528 432 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 FAM193AP78312 1265 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 PLEKHO1Q53GL0 409 aaPredicted RBP10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 CHD2O14647 1828 aaKnown RBP10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 SARM1Q6SZW1 724 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 FILIP1Q7Z7B0 1213 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 NUDT16Q96DE0 195 aaKnown RBP10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 FUT8Q9BYC5 575 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 PLEKHA4Q9H4M7 779 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 HDAC5Q9UQL6 1122 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 IL13P35225 146 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 GOLGA8FQ08AF8 430 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 GOLGA8DPQ0D2H9 430 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 E2F4Q16254 413 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 HSP90AA4PQ58FG1 418 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 BOLA2Q9H3K6 86 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 STAP2Q9UGK3 403 aa10.25□□□□□ -0.77
SMARCA1-203ENST00000371123 KAT6BQ8WYB5 2073 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 CCDC171Q6TFL3 1326 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 DNAJC21Q5F1R6 531 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 TTLL5Q6EMB2 1281 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 MPRIPQ6WCQ1 1025 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 FBXO18Q8NFZ0 1043 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 JAKMIP1Q96N16 626 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 ADAM21Q9UKJ8 722 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 GTF2A1P52655 376 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 SF3A1Q15459 793 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 PRPF40BQ6NWY9 871 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 CC2D1AQ6P1N0 951 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 DRC1Q96MC2 740 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 LIMCH1Q9UPQ0 1083 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 PA2G4Q9UQ80 394 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 SGSM2O43147 1006 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 CASTP20810 708 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 ZC3H6P61129 1189 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 LMOD3Q0VAK6 560 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms