RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 CLEC11AQ9Y240 323 aa20.84■□□□□ 0.93
VMA21-202ENST00000370361 GJA3Q9Y6H8 435 aa20.84■□□□□ 0.93
VMA21-202ENST00000370361 LRRC37AA6NMS7 1700 aa20.84■□□□□ 0.93
VMA21-202ENST00000370361 TCERG1O14776 1098 aaKnown RBP20.83■□□□□ 0.93
VMA21-202ENST00000370361 KIAA2012Q0VF49 1180 aa20.83■□□□□ 0.93
VMA21-202ENST00000370361 AOC3Q16853 763 aa20.83■□□□□ 0.93
VMA21-202ENST00000370361 USP50Q70EL3 339 aaPredicted RBP20.83■□□□□ 0.93
VMA21-202ENST00000370361 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
VMA21-202ENST00000370361 TMEM88BA6NKF7 163 aa20.82■□□□□ 0.92
VMA21-202ENST00000370361 ITGBL1O95965 494 aaPredicted RBP20.82■□□□□ 0.92
VMA21-202ENST00000370361 ZBTB38Q8NAP3 1195 aaPredicted RBP20.82■□□□□ 0.92
VMA21-202ENST00000370361 CCDC191Q8NCU4 936 aa20.82■□□□□ 0.92
VMA21-202ENST00000370361 IL16Q14005 1332 aa20.81■□□□□ 0.92
VMA21-202ENST00000370361 ATP5J2-PTCD1G3V325 749 aa20.81■□□□□ 0.92
VMA21-202ENST00000370361 SCNN1DP51172 638 aa20.81■□□□□ 0.92
VMA21-202ENST00000370361 TNIP1Q15025 636 aa20.81■□□□□ 0.92
VMA21-202ENST00000370361 CNTROBQ8N137 903 aa20.81■□□□□ 0.92
VMA21-202ENST00000370361 FAM89AQ96GI7 184 aa20.81■□□□□ 0.92
VMA21-202ENST00000370361 CNTNAP1P78357 1384 aa20.81■□□□□ 0.92
VMA21-202ENST00000370361 IRS4O14654 1257 aaPredicted RBP20.8■□□□□ 0.92
VMA21-202ENST00000370361 ADARB2Q9NS39 739 aaKnown RBP20.79■□□□□ 0.92
VMA21-202ENST00000370361 ANP32CO43423 234 aa20.78■□□□□ 0.92
VMA21-202ENST00000370361 PCCAP05165 728 aaPredicted RBP20.78■□□□□ 0.92
VMA21-202ENST00000370361 CIAPIN1Q6FI81 312 aa20.78■□□□□ 0.92
VMA21-202ENST00000370361 C8orf58Q8NAV2 365 aa20.78■□□□□ 0.92
VMA21-202ENST00000370361 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
VMA21-202ENST00000370361 CWC25Q9NXE8 425 aaPredicted RBP20.78■□□□□ 0.92
VMA21-202ENST00000370361 GPRC5DQ9NZD1 345 aa20.78■□□□□ 0.92
VMA21-202ENST00000370361 ELL2O00472 640 aaPredicted RBP20.77■□□□□ 0.92
VMA21-202ENST00000370361 CXCL9Q07325 125 aa20.77■□□□□ 0.92
VMA21-202ENST00000370361 WWC1Q8IX03 1113 aa20.77■□□□□ 0.92
VMA21-202ENST00000370361 EYA3Q99504 573 aa20.77■□□□□ 0.92
VMA21-202ENST00000370361 METTL22Q9BUU2 404 aaPredicted RBP20.77■□□□□ 0.92
VMA21-202ENST00000370361 PHAXQ9H814 394 aaKnown RBP20.77■□□□□ 0.92
VMA21-202ENST00000370361 LTBP1Q14766 1721 aa20.77■□□□□ 0.92
VMA21-202ENST00000370361 RPS8P62241 208 aaKnown RBP20.76■□□□□ 0.91
VMA21-202ENST00000370361 CCDC152Q4G0S7 254 aa20.76■□□□□ 0.91
VMA21-202ENST00000370361 DUOX1Q9NRD9 1551 aa20.76■□□□□ 0.91
VMA21-202ENST00000370361 PCNTO95613 3336 aa20.75■□□□□ 0.91
VMA21-202ENST00000370361 HSPA1AP0DMV8 641 aaKnown RBP20.75■□□□□ 0.91
VMA21-202ENST00000370361 HSPA1BP0DMV9 641 aaKnown RBP20.75■□□□□ 0.91
VMA21-202ENST00000370361 EPS15P42566 896 aa20.75■□□□□ 0.91
VMA21-202ENST00000370361 NEXNQ0ZGT2 675 aa20.75■□□□□ 0.91
VMA21-202ENST00000370361 WASHC4Q2M389 1173 aa20.75■□□□□ 0.91
VMA21-202ENST00000370361 MAP1SQ66K74 1059 aaPredicted RBP20.75■□□□□ 0.91
VMA21-202ENST00000370361 MYD88Q99836 296 aa20.75■□□□□ 0.91
VMA21-202ENST00000370361 MKRN1Q9UHC7 482 aaKnown RBP20.75■□□□□ 0.91
VMA21-202ENST00000370361 RASSF10A6NK89 507 aa20.74■□□□□ 0.91
VMA21-202ENST00000370361 PDE8AO60658 829 aa20.74■□□□□ 0.91
VMA21-202ENST00000370361 KSR2Q6VAB6 950 aa20.74■□□□□ 0.91
VMA21-202ENST00000370361 ZC3H15Q8WU90 426 aaKnown RBP20.74■□□□□ 0.91
VMA21-202ENST00000370361 CELF1Q92879 486 aaKnown RBP20.74■□□□□ 0.91
VMA21-202ENST00000370361 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
VMA21-202ENST00000370361 NSFL1CQ9UNZ2 370 aaKnown RBP20.74■□□□□ 0.91
VMA21-202ENST00000370361 SLC51AQ86UW1 340 aa20.73■□□□□ 0.91
VMA21-202ENST00000370361 BCL2L13Q9BXK5 485 aa20.73■□□□□ 0.91
VMA21-202ENST00000370361 PODXL2Q9NZ53 605 aa20.73■□□□□ 0.91
VMA21-202ENST00000370361 TAF1P21675 1872 aa20.73■□□□□ 0.91
VMA21-202ENST00000370361 CACNA1FO60840 1977 aa20.72■□□□□ 0.91
VMA21-202ENST00000370361 GMPSP49915 693 aaPredicted RBP20.72■□□□□ 0.91
VMA21-202ENST00000370361 TWISTNBQ3B726 338 aaPredicted RBP20.72■□□□□ 0.91
VMA21-202ENST00000370361 DPF2Q92785 391 aa20.72■□□□□ 0.91
VMA21-202ENST00000370361 RPS12P25398 132 aaKnown RBP20.71■□□□□ 0.91
VMA21-202ENST00000370361 RTL5Q5HYW3 569 aaPredicted RBP20.71■□□□□ 0.91
VMA21-202ENST00000370361 WDR63Q8IWG1 891 aa20.71■□□□□ 0.91
VMA21-202ENST00000370361 TSPYL6Q8N831 410 aa20.71■□□□□ 0.91
VMA21-202ENST00000370361 MAP3K2Q9Y2U5 619 aa20.71■□□□□ 0.91
VMA21-202ENST00000370361 C6orf229H3BNL8 230 aa20.7■□□□□ 0.9
VMA21-202ENST00000370361 H7C1D1 291 aa20.7■□□□□ 0.9
VMA21-202ENST00000370361 DEFB115Q30KQ5 88 aa20.7■□□□□ 0.9
VMA21-202ENST00000370361 CCDC184Q52MB2 194 aa20.7■□□□□ 0.9
VMA21-202ENST00000370361 TSR2Q969E8 191 aaKnown RBP20.7■□□□□ 0.9
VMA21-202ENST00000370361 CDC5LQ99459 802 aaKnown RBP20.7■□□□□ 0.9
VMA21-202ENST00000370361 PGAP2Q9UHJ9 254 aa20.7■□□□□ 0.9
VMA21-202ENST00000370361 TRPM7Q96QT4 1865 aa20.7■□□□□ 0.9
VMA21-202ENST00000370361 PI4KAP2A4QPH2 592 aa20.69■□□□□ 0.9
VMA21-202ENST00000370361 RAD17O75943 681 aa20.69■□□□□ 0.9
VMA21-202ENST00000370361 GPSM2P81274 684 aa20.69■□□□□ 0.9
VMA21-202ENST00000370361 PI4KAP1Q8N8J0 262 aa20.69■□□□□ 0.9
VMA21-202ENST00000370361 AIDAQ96BJ3 306 aa20.69■□□□□ 0.9
VMA21-202ENST00000370361 YDJCA8MPS7 323 aa20.68■□□□□ 0.9
VMA21-202ENST00000370361 ECE1P42892 770 aa20.68■□□□□ 0.9
VMA21-202ENST00000370361 TBC1D16Q8TBP0 767 aa20.68■□□□□ 0.9
VMA21-202ENST00000370361 ZC3H12CQ9C0D7 883 aaKnown RBP20.68■□□□□ 0.9
VMA21-202ENST00000370361 POLLQ9UGP5 575 aa20.68■□□□□ 0.9
VMA21-202ENST00000370361 ABT1Q9ULW3 272 aaKnown RBP20.68■□□□□ 0.9
VMA21-202ENST00000370361 RTL9Q8NET4 1388 aa20.68■□□□□ 0.9
VMA21-202ENST00000370361 VEGFBP49765 207 aa20.67■□□□□ 0.9
VMA21-202ENST00000370361 CTSWP56202 376 aa20.67■□□□□ 0.9
VMA21-202ENST00000370361 COL13A1Q5TAT6 717 aaPredicted RBP20.67■□□□□ 0.9
VMA21-202ENST00000370361 ANKRD18AQ8IVF6 992 aa20.67■□□□□ 0.9
VMA21-202ENST00000370361 ANKIB1Q9P2G1 1089 aa20.67■□□□□ 0.9
VMA21-202ENST00000370361 CNOT7Q9UIV1 285 aaKnown RBP20.67■□□□□ 0.9
VMA21-202ENST00000370361 GGA1Q9UJY5 639 aa20.67■□□□□ 0.9
VMA21-202ENST00000370361 MYH3P11055 1940 aa20.66■□□□□ 0.9
VMA21-202ENST00000370361 SLC4A2P04920 1241 aa20.66■□□□□ 0.9
VMA21-202ENST00000370361 ZNF428Q96B54 188 aa20.66■□□□□ 0.9
VMA21-202ENST00000370361 XDHP47989 1333 aa20.66■□□□□ 0.9
VMA21-202ENST00000370361 ZNF609O15014 1411 aa20.66■□□□□ 0.9
VMA21-202ENST00000370361 FANCIQ9NVI1 1328 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms