RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 HCLS1P14317 486 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-202ENST00000368662 RFX5P48382 616 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-202ENST00000368662 G3BP1Q13283 466 aaKnown RBP eCLIP15.24■□□□□ 0.03
TUBE1-202ENST00000368662 IFIT5Q13325 482 aaKnown RBP15.24■□□□□ 0.03
TUBE1-202ENST00000368662 OS9Q13438 667 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-202ENST00000368662 CCDC152Q4G0S7 254 aa15.24■□□□□ 0.03
TUBE1-202ENST00000368662 PTPN12Q05209 780 aaKnown RBP15.23■□□□□ 0.03
TUBE1-202ENST00000368662 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
TUBE1-202ENST00000368662 SERPINB2P05120 415 aa15.23■□□□□ 0.03
TUBE1-202ENST00000368662 KIF1BPQ96EK5 621 aa15.23■□□□□ 0.03
TUBE1-202ENST00000368662 RTL9Q8NET4 1388 aa15.23■□□□□ 0.03
TUBE1-202ENST00000368662 RIC1Q4ADV7 1423 aa15.22■□□□□ 0.03
TUBE1-202ENST00000368662 ANKRD18BA2A2Z9 1011 aa15.22■□□□□ 0.03
TUBE1-202ENST00000368662 POLRMTO00411 1230 aaKnown RBP15.22■□□□□ 0.03
TUBE1-202ENST00000368662 ST5P78524 1137 aa15.22■□□□□ 0.03
TUBE1-202ENST00000368662 FAM161AQ3B820 660 aa15.22■□□□□ 0.03
TUBE1-202ENST00000368662 SLC16A10Q8TF71 515 aa15.22■□□□□ 0.03
TUBE1-202ENST00000368662 NLRP3Q96P20 1036 aa15.22■□□□□ 0.03
TUBE1-202ENST00000368662 PA2G4Q9UQ80 394 aaKnown RBP15.22■□□□□ 0.03
TUBE1-202ENST00000368662 DDX60Q8IY21 1712 aaKnown RBP15.22■□□□□ 0.03
TUBE1-202ENST00000368662 ITGA6P23229 1130 aa15.22■□□□□ 0.03
TUBE1-202ENST00000368662 SF3B3Q15393 1217 aaKnown RBP15.22■□□□□ 0.03
TUBE1-202ENST00000368662 TAF7LQ5H9L4 462 aa15.22■□□□□ 0.03
TUBE1-202ENST00000368662 LNPKQ9C0E8 428 aa15.22■□□□□ 0.03
TUBE1-202ENST00000368662 GREM2Q9H772 168 aa15.22■□□□□ 0.03
TUBE1-202ENST00000368662 ABCC12Q96J65 1359 aa15.21■□□□□ 0.03
TUBE1-202ENST00000368662 APBB1O00213 710 aa15.21■□□□□ 0.03
TUBE1-202ENST00000368662 PRR5LQ6MZQ0 368 aa15.21■□□□□ 0.03
TUBE1-202ENST00000368662 RHPN1Q8TCX5 695 aa15.21■□□□□ 0.03
TUBE1-202ENST00000368662 CIAO1O76071 339 aa15.2■□□□□ 0.02
TUBE1-202ENST00000368662 DDR1Q08345 913 aa15.2■□□□□ 0.02
TUBE1-202ENST00000368662 PARP3Q9Y6F1 533 aa15.2■□□□□ 0.02
TUBE1-202ENST00000368662 KLHDC4Q8TBB5 520 aa15.2■□□□□ 0.02
TUBE1-202ENST00000368662 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
TUBE1-202ENST00000368662 SIL1Q9H173 461 aa15.2■□□□□ 0.02
TUBE1-202ENST00000368662 EYA2O00167 538 aa15.19■□□□□ 0.02
TUBE1-202ENST00000368662 MMP10P09238 476 aa15.19■□□□□ 0.02
TUBE1-202ENST00000368662 IL15P40933 162 aaPredicted RBP15.19■□□□□ 0.02
TUBE1-202ENST00000368662 RGS3P49796 1198 aa15.19■□□□□ 0.02
TUBE1-202ENST00000368662 CLASRPQ8N2M8 674 aaKnown RBP15.18■□□□□ 0.02
TUBE1-202ENST00000368662 CDC5LQ99459 802 aaKnown RBP15.18■□□□□ 0.02
TUBE1-202ENST00000368662 SMARCA5O60264 1052 aaPredicted RBP15.17■□□□□ 0.02
TUBE1-202ENST00000368662 SASH1O94885 1247 aa15.17■□□□□ 0.02
TUBE1-202ENST00000368662 PDE4AP27815 886 aa15.17■□□□□ 0.02
TUBE1-202ENST00000368662 IGHMBP2P38935 993 aaKnown RBP15.17■□□□□ 0.02
TUBE1-202ENST00000368662 MSL1Q68DK7 614 aa15.17■□□□□ 0.02
TUBE1-202ENST00000368662 LDHAL6AQ6ZMR3 332 aa15.17■□□□□ 0.02
TUBE1-202ENST00000368662 ZNF594Q96JF6 807 aaPredicted RBP15.17■□□□□ 0.02
TUBE1-202ENST00000368662 NRXN2Q9P2S2 1712 aa15.17■□□□□ 0.02
TUBE1-202ENST00000368662 ATG9AQ7Z3C6 839 aa15.16■□□□□ 0.02
TUBE1-202ENST00000368662 MPHOSPH8Q99549 860 aa15.16■□□□□ 0.02
TUBE1-202ENST00000368662 BRIP1Q9BX63 1249 aa15.16■□□□□ 0.02
TUBE1-202ENST00000368662 IL1RAPL2Q9NP60 686 aa15.16■□□□□ 0.02
TUBE1-202ENST00000368662 CNNM1Q9NRU3 951 aa15.16■□□□□ 0.02
TUBE1-202ENST00000368662 C3orf67Q6ZVT6 689 aa15.15■□□□□ 0.02
TUBE1-202ENST00000368662 DDX46Q7L014 1031 aaKnown RBP15.15■□□□□ 0.02
TUBE1-202ENST00000368662 SKAP1Q86WV1 359 aa15.15■□□□□ 0.02
TUBE1-202ENST00000368662 GPR108Q9NPR9 543 aa15.15■□□□□ 0.02
TUBE1-202ENST00000368662 LRP5O75197 1615 aa15.14■□□□□ 0.01
TUBE1-202ENST00000368662 KLRG2A4D1S0 409 aaPredicted RBP15.14■□□□□ 0.01
TUBE1-202ENST00000368662 CRY2Q49AN0 593 aa15.14■□□□□ 0.01
TUBE1-202ENST00000368662 LRRC24Q50LG9 513 aa15.14■□□□□ 0.01
TUBE1-202ENST00000368662 ANKRD18AQ8IVF6 992 aa15.14■□□□□ 0.01
TUBE1-202ENST00000368662 CCDC24Q8N4L8 307 aa15.14■□□□□ 0.01
TUBE1-202ENST00000368662 SEC31BQ9NQW1 1179 aa15.14■□□□□ 0.01
TUBE1-202ENST00000368662 CEP126Q9P2H0 1117 aa15.14■□□□□ 0.01
TUBE1-202ENST00000368662 MROH5Q6ZUA9 1318 aa15.14■□□□□ 0.01
TUBE1-202ENST00000368662 TFCP2Q12800 502 aa15.14■□□□□ 0.01
TUBE1-202ENST00000368662 RPGRQ92834 1020 aaKnown RBP15.14■□□□□ 0.01
TUBE1-202ENST00000368662 PUS3Q9BZE2 481 aaKnown RBP15.14■□□□□ 0.01
TUBE1-202ENST00000368662 RIPOR2Q9Y4F9 1068 aa15.14■□□□□ 0.01
TUBE1-202ENST00000368662 IFIT2P09913 472 aaKnown RBP15.13■□□□□ 0.01
TUBE1-202ENST00000368662 PDE6BP35913 854 aa15.13■□□□□ 0.01
TUBE1-202ENST00000368662 PLEKHM2Q8IWE5 1019 aa15.13■□□□□ 0.01
TUBE1-202ENST00000368662 BCL11AQ9H165 835 aa15.13■□□□□ 0.01
TUBE1-202ENST00000368662 AKAP2Q9Y2D5 859 aa15.13■□□□□ 0.01
TUBE1-202ENST00000368662 TNRC6CQ9HCJ0 1690 aaKnown RBP15.13■□□□□ 0.01
TUBE1-202ENST00000368662 MX1P20591 662 aa15.13■□□□□ 0.01
TUBE1-202ENST00000368662 C16orf71Q8IYS4 520 aaPredicted RBP15.13■□□□□ 0.01
TUBE1-202ENST00000368662 GPATCH3Q96I76 525 aa15.13■□□□□ 0.01
TUBE1-202ENST00000368662 PDGFDQ9GZP0 370 aaPredicted RBP15.13■□□□□ 0.01
TUBE1-202ENST00000368662 OSBPL3Q9H4L5 887 aa15.13■□□□□ 0.01
TUBE1-202ENST00000368662 BSDC1Q9NW68 430 aaPredicted RBP15.13■□□□□ 0.01
TUBE1-202ENST00000368662 TNNI3KQ59H18 835 aa15.12■□□□□ 0.01
TUBE1-202ENST00000368662 METTL24Q5JXM2 366 aa15.12■□□□□ 0.01
TUBE1-202ENST00000368662 AACSQ86V21 672 aa15.12■□□□□ 0.01
TUBE1-202ENST00000368662 RBM17Q96I25 401 aaKnown RBP15.12■□□□□ 0.01
TUBE1-202ENST00000368662 FPGT-TNNI3KV9GXZ4 949 aa15.12■□□□□ 0.01
TUBE1-202ENST00000368662 CASZ1Q86V15 1759 aa15.12■□□□□ 0.01
TUBE1-202ENST00000368662 AOX1Q06278 1338 aa15.12■□□□□ 0.01
TUBE1-202ENST00000368662 SALL3Q9BXA9 1300 aa15.12■□□□□ 0.01
TUBE1-202ENST00000368662 RPS8P62241 208 aaKnown RBP15.11■□□□□ 0.01
TUBE1-202ENST00000368662 R3HDM1Q15032 1099 aaKnown RBP15.11■□□□□ 0.01
TUBE1-202ENST00000368662 MTFR1LQ9H019 292 aa15.11■□□□□ 0.01
TUBE1-202ENST00000368662 STAP2Q9UGK3 403 aa15.11■□□□□ 0.01
TUBE1-202ENST00000368662 TTC41PQ6P2S7 1318 aa15.11■□□□□ 0.01
TUBE1-202ENST00000368662 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
TUBE1-202ENST00000368662 PDE1AP54750 535 aa15.11■□□□□ 0.01
TUBE1-202ENST00000368662 GRAPQ13588 217 aa15.11■□□□□ 0.01
TUBE1-202ENST00000368662 ILDR2Q71H61 639 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms