RNA–Protein interactions for RNA: ENST00000368450.5

SHC1-204, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-204ENST00000368450 TRIM66O15016 1216 aa17.54■□□□□ 0.4
SHC1-204ENST00000368450 SLC20A2Q08357 652 aa17.54■□□□□ 0.4
SHC1-204ENST00000368450 CREBRFQ8IUR6 639 aa17.54■□□□□ 0.4
SHC1-204ENST00000368450 RASSF4Q9H2L5 321 aa17.54■□□□□ 0.4
SHC1-204ENST00000368450 OAS2P29728 719 aaKnown RBP17.53■□□□□ 0.4
SHC1-204ENST00000368450 GUCY1B3Q02153 619 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 NMIQ13287 307 aaPredicted RBP17.53■□□□□ 0.4
SHC1-204ENST00000368450 HDGFL1Q5TGJ6 251 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 GPATCH3Q96I76 525 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 LRRC2Q9BYS8 371 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 SIL1Q9H173 461 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 ANKRD1Q15327 319 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 NAT10Q9H0A0 1025 aaKnown RBP17.53■□□□□ 0.4
SHC1-204ENST00000368450 ECHDC1Q9NTX5 307 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 SLC52A1Q9NWF4 448 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 LMAN1P49257 510 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 TAF7Q15545 349 aaPredicted RBP17.53■□□□□ 0.4
SHC1-204ENST00000368450 ISM2Q6H9L7 571 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 AACSQ86V21 672 aa17.53■□□□□ 0.4
SHC1-204ENST00000368450 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
SHC1-204ENST00000368450 WASLO00401 505 aaPredicted RBP17.52■□□□□ 0.4
SHC1-204ENST00000368450 ZSCAN26Q16670 478 aa17.52■□□□□ 0.4
SHC1-204ENST00000368450 FBXO31Q5XUX0 539 aaPredicted RBP17.52■□□□□ 0.4
SHC1-204ENST00000368450 DHX40Q8IX18 779 aaKnown RBP17.52■□□□□ 0.4
SHC1-204ENST00000368450 FSIP1Q8NA03 581 aa17.52■□□□□ 0.4
SHC1-204ENST00000368450 FSD1Q9BTV5 496 aa17.52■□□□□ 0.4
SHC1-204ENST00000368450 XPO4Q9C0E2 1151 aaKnown RBP17.52■□□□□ 0.4
SHC1-204ENST00000368450 FAM193AP78312 1265 aa17.52■□□□□ 0.39
SHC1-204ENST00000368450 CCDC8Q9H0W5 538 aaPredicted RBP17.51■□□□□ 0.39
SHC1-204ENST00000368450 KIF20BQ96Q89 1820 aa17.51■□□□□ 0.39
SHC1-204ENST00000368450 CTAGE5O15320 804 aa17.51■□□□□ 0.39
SHC1-204ENST00000368450 RAPGEF3O95398 923 aa17.51■□□□□ 0.39
SHC1-204ENST00000368450 ANXA1P04083 346 aa17.51■□□□□ 0.39
SHC1-204ENST00000368450 BOLA2Q9H3K6 86 aa17.51■□□□□ 0.39
SHC1-204ENST00000368450 CCDC61Q9Y6R9 512 aa17.51■□□□□ 0.39
SHC1-204ENST00000368450 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
SHC1-204ENST00000368450 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
SHC1-204ENST00000368450 GOLPH3LQ9H4A5 285 aa17.51■□□□□ 0.39
SHC1-204ENST00000368450 L2HGDHQ9H9P8 463 aa17.51■□□□□ 0.39
SHC1-204ENST00000368450 ORC3Q9UBD5 711 aaPredicted RBP17.51■□□□□ 0.39
SHC1-204ENST00000368450 RPS6KB1P23443 525 aa17.5■□□□□ 0.39
SHC1-204ENST00000368450 EVCP57679 992 aa17.5■□□□□ 0.39
SHC1-204ENST00000368450 EDC4Q6P2E9 1401 aaKnown RBP17.5■□□□□ 0.39
SHC1-204ENST00000368450 SMC1AQ14683 1233 aaKnown RBP17.5■□□□□ 0.39
SHC1-204ENST00000368450 PTPN21Q16825 1174 aa17.5■□□□□ 0.39
SHC1-204ENST00000368450 UHRF1BP1LA0JNW5 1464 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 ARMCX5Q6P1M9 558 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 EVI5LQ96CN4 794 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 LCMT1Q9UIC8 334 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 CRB1P82279 1406 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 MAP3K19Q56UN5 1328 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 TTC21BQ7Z4L5 1316 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 ATP7BP35670 1465 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 AATKQ6ZMQ8 1374 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 ETF1P62495 437 aaKnown RBP17.49■□□□□ 0.39
SHC1-204ENST00000368450 TOB2Q14106 344 aaPredicted RBP17.49■□□□□ 0.39
SHC1-204ENST00000368450 SF3A1Q15459 793 aaKnown RBP17.49■□□□□ 0.39
SHC1-204ENST00000368450 LMTK2Q8IWU2 1503 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 MYO1CO00159 1063 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 LMOD1P29536 600 aaPredicted RBP17.49■□□□□ 0.39
SHC1-204ENST00000368450 RESTQ13127 1097 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 TAF7LQ5H9L4 462 aa17.49■□□□□ 0.39
SHC1-204ENST00000368450 A0A1B0GVL5 298 aa17.48■□□□□ 0.39
SHC1-204ENST00000368450 MAP4K1Q92918 833 aa17.48■□□□□ 0.39
SHC1-204ENST00000368450 ZSWIM4Q9H7M6 989 aa17.48■□□□□ 0.39
SHC1-204ENST00000368450 CWC15Q9P013 229 aaKnown RBP17.48■□□□□ 0.39
SHC1-204ENST00000368450 NBPF11Q86T75 865 aa17.48■□□□□ 0.39
SHC1-204ENST00000368450 CCDC150Q8NCX0 1101 aa17.48■□□□□ 0.39
SHC1-204ENST00000368450 TTC41PQ6P2S7 1318 aa17.48■□□□□ 0.39
SHC1-204ENST00000368450 A0A0D9SFI3 127 aa17.47■□□□□ 0.39
SHC1-204ENST00000368450 PI4KAP2A4QPH2 592 aa17.47■□□□□ 0.39
SHC1-204ENST00000368450 GOLGA8FQ08AF8 430 aa17.47■□□□□ 0.39
SHC1-204ENST00000368450 GOLGA8DPQ0D2H9 430 aa17.47■□□□□ 0.39
SHC1-204ENST00000368450 PI4KAP1Q8N8J0 262 aa17.47■□□□□ 0.39
SHC1-204ENST00000368450 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
SHC1-204ENST00000368450 AK7Q96M32 723 aa17.47■□□□□ 0.39
SHC1-204ENST00000368450 USP28Q96RU2 1077 aa17.47■□□□□ 0.39
SHC1-204ENST00000368450 UTP14AQ9BVJ6 771 aaKnown RBP17.47■□□□□ 0.39
SHC1-204ENST00000368450 C9orf78Q9NZ63 289 aaPredicted RBP17.47■□□□□ 0.39
SHC1-204ENST00000368450 POLA2Q14181 598 aa17.47■□□□□ 0.39
SHC1-204ENST00000368450 Q6ZUG5 572 aa17.46■□□□□ 0.39
SHC1-204ENST00000368450 ZSCAN16Q9H4T2 348 aaPredicted RBP17.46■□□□□ 0.39
SHC1-204ENST00000368450 ZRANB2O95218 330 aaKnown RBP eCLIP17.46■□□□□ 0.39
SHC1-204ENST00000368450 CCT2P78371 535 aaKnown RBP17.46■□□□□ 0.39
SHC1-204ENST00000368450 DPCR1Q3MIW9 517 aa17.46■□□□□ 0.39
SHC1-204ENST00000368450 AMPHP49418 695 aa17.46■□□□□ 0.38
SHC1-204ENST00000368450 CCDC93Q567U6 631 aa17.46■□□□□ 0.38
SHC1-204ENST00000368450 PSDA5PKW4 1024 aaPredicted RBP17.45■□□□□ 0.38
SHC1-204ENST00000368450 SASH3O75995 380 aa17.45■□□□□ 0.38
SHC1-204ENST00000368450 FAM160A1Q05DH4 1040 aa17.45■□□□□ 0.38
SHC1-204ENST00000368450 SKIDA1Q1XH10 827 aa17.45■□□□□ 0.38
SHC1-204ENST00000368450 CHMP4CQ96CF2 233 aa17.45■□□□□ 0.38
SHC1-204ENST00000368450 ARFGAP3Q9NP61 516 aa17.45■□□□□ 0.38
SHC1-204ENST00000368450 OSBPL5Q9H0X9 879 aaPredicted RBP17.45■□□□□ 0.38
SHC1-204ENST00000368450 IMPACTQ9P2X3 320 aa17.45■□□□□ 0.38
SHC1-204ENST00000368450 CCDC9Q9Y3X0 531 aaKnown RBP17.45■□□□□ 0.38
SHC1-204ENST00000368450 KIDINS220Q9ULH0 1771 aa17.45■□□□□ 0.38
SHC1-204ENST00000368450 TOMM22Q9NS69 142 aa17.44■□□□□ 0.38
SHC1-204ENST00000368450 EDC3Q96F86 508 aaKnown RBP17.44■□□□□ 0.38
SHC1-204ENST00000368450 SERPINC1P01008 464 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms