RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 DCTPP1Q9H773 170 aa11.89□□□□□ -0.51
VTA1-201ENST00000367621 MAP3K15Q6ZN16 1313 aa11.88□□□□□ -0.51
VTA1-201ENST00000367621 N4BP2Q86UW6 1770 aaPredicted RBP11.88□□□□□ -0.51
VTA1-201ENST00000367621 PNMA6EA0A0J9YXQ4 647 aa11.88□□□□□ -0.51
VTA1-201ENST00000367621 TRIM28Q13263 835 aaKnown RBP11.88□□□□□ -0.51
VTA1-201ENST00000367621 TCIRG1Q13488 830 aa11.88□□□□□ -0.51
VTA1-201ENST00000367621 RC3H1Q5TC82 1133 aaKnown RBP11.88□□□□□ -0.51
VTA1-201ENST00000367621 SUCLG2Q96I99 432 aa11.88□□□□□ -0.51
VTA1-201ENST00000367621 LRRC4BQ9NT99 713 aa11.88□□□□□ -0.51
VTA1-201ENST00000367621 RREB1Q92766 1687 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 CNTNAP4Q9C0A0 1308 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 ERVV-1B6SEH8 477 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 H7C1W4 665 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 TRIM37O94972 964 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 PDE4AP27815 886 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 LSM11P83369 360 aaKnown RBP eCLIP11.87□□□□□ -0.51
VTA1-201ENST00000367621 NUCB1Q02818 461 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 NEXNQ0ZGT2 675 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 MTX1Q13505 466 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 EPHA10Q5JZY3 1008 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 SSH3Q8TE77 659 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 KHSRPQ92945 711 aaKnown RBP eCLIP11.87□□□□□ -0.513e-7■■■■□ 23.2
VTA1-201ENST00000367621 MFRPQ9BY79 579 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 C9orf78Q9NZ63 289 aaPredicted RBP11.87□□□□□ -0.51
VTA1-201ENST00000367621 CCNL1Q9UK58 526 aaPredicted RBP11.87□□□□□ -0.51
VTA1-201ENST00000367621 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
VTA1-201ENST00000367621 CAMTA2O94983 1202 aa11.86□□□□□ -0.51
VTA1-201ENST00000367621 GIGYF2Q6Y7W6 1299 aaKnown RBP11.86□□□□□ -0.51
VTA1-201ENST00000367621 KIF6Q6ZMV9 814 aa11.86□□□□□ -0.51
VTA1-201ENST00000367621 PPP1R42Q7Z4L9 355 aa11.86□□□□□ -0.51
VTA1-201ENST00000367621 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
VTA1-201ENST00000367621 JARID2Q92833 1246 aaPredicted RBP11.86□□□□□ -0.51
VTA1-201ENST00000367621 GCC1Q96CN9 775 aa11.86□□□□□ -0.51
VTA1-201ENST00000367621 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
VTA1-201ENST00000367621 ZNF330Q9Y3S2 320 aaPredicted RBP11.86□□□□□ -0.51
VTA1-201ENST00000367621 COL15A1P39059 1388 aa11.86□□□□□ -0.51
VTA1-201ENST00000367621 SLC34A2O95436 690 aa11.85□□□□□ -0.51
VTA1-201ENST00000367621 PBX2P40425 430 aa11.85□□□□□ -0.51
VTA1-201ENST00000367621 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
VTA1-201ENST00000367621 DZIP3Q86Y13 1208 aaKnown RBP11.85□□□□□ -0.51
VTA1-201ENST00000367621 ZNF34Q8IZ26 560 aa11.85□□□□□ -0.51
VTA1-201ENST00000367621 CCDC191Q8NCU4 936 aa11.85□□□□□ -0.51
VTA1-201ENST00000367621 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
VTA1-201ENST00000367621 BTAF1O14981 1849 aa11.85□□□□□ -0.51
VTA1-201ENST00000367621 BRWD3Q6RI45 1802 aa11.84□□□□□ -0.51
VTA1-201ENST00000367621 NUP188Q5SRE5 1749 aa11.84□□□□□ -0.51
VTA1-201ENST00000367621 A0A087WZG4 1122 aa11.84□□□□□ -0.51
VTA1-201ENST00000367621 RPS6KA4O75676 772 aa11.84□□□□□ -0.51
VTA1-201ENST00000367621 BICC1Q9H694 974 aaKnown RBP11.84□□□□□ -0.51
VTA1-201ENST00000367621 C2orf72A6NCS6 295 aa11.83□□□□□ -0.52
VTA1-201ENST00000367621 HMMRO75330 724 aa11.83□□□□□ -0.52
VTA1-201ENST00000367621 FOXO4P98177 505 aa11.83□□□□□ -0.52
VTA1-201ENST00000367621 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
VTA1-201ENST00000367621 NLRP10Q86W26 655 aa11.83□□□□□ -0.52
VTA1-201ENST00000367621 CHD1LQ86WJ1 897 aa11.83□□□□□ -0.52
VTA1-201ENST00000367621 BCL2L12Q9HB09 334 aa11.83□□□□□ -0.52
VTA1-201ENST00000367621 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
VTA1-201ENST00000367621 STK24Q9Y6E0 443 aa11.83□□□□□ -0.52
VTA1-201ENST00000367621 SBF2Q86WG5 1849 aa11.83□□□□□ -0.52
VTA1-201ENST00000367621 ARFGEF2Q9Y6D5 1785 aa11.82□□□□□ -0.52
VTA1-201ENST00000367621 SRGAP3O43295 1099 aa11.82□□□□□ -0.52
VTA1-201ENST00000367621 RGS3P49796 1198 aa11.82□□□□□ -0.52
VTA1-201ENST00000367621 HSP90AB3PQ58FF7 597 aa11.82□□□□□ -0.52
VTA1-201ENST00000367621 SLC27A3Q5K4L6 730 aa11.82□□□□□ -0.52
VTA1-201ENST00000367621 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
VTA1-201ENST00000367621 UBE3BQ7Z3V4 1068 aa11.82□□□□□ -0.52
VTA1-201ENST00000367621 ARXQ96QS3 562 aa11.82□□□□□ -0.52
VTA1-201ENST00000367621 COL5A3P25940 1745 aaPredicted RBP11.82□□□□□ -0.52
VTA1-201ENST00000367621 UBN2Q6ZU65 1347 aa11.82□□□□□ -0.52
VTA1-201ENST00000367621 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
VTA1-201ENST00000367621 PLSCR1O15162 318 aa11.81□□□□□ -0.52
VTA1-201ENST00000367621 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
VTA1-201ENST00000367621 GPTP24298 496 aa11.81□□□□□ -0.52
VTA1-201ENST00000367621 RFX5P48382 616 aaPredicted RBP11.81□□□□□ -0.52
VTA1-201ENST00000367621 SYNE4Q8N205 404 aa11.81□□□□□ -0.52
VTA1-201ENST00000367621 LNPKQ9C0E8 428 aa11.81□□□□□ -0.52
VTA1-201ENST00000367621 HDAC5Q9UQL6 1122 aa11.81□□□□□ -0.52
VTA1-201ENST00000367621 NOP58Q9Y2X3 529 aaKnown RBP11.81□□□□□ -0.52
VTA1-201ENST00000367621 LY75O60449 1722 aa11.8□□□□□ -0.52
VTA1-201ENST00000367621 STK25O00506 426 aa11.8□□□□□ -0.52
VTA1-201ENST00000367621 GNPATO15228 680 aa11.8□□□□□ -0.52
VTA1-201ENST00000367621 SMARCA5O60264 1052 aaPredicted RBP11.8□□□□□ -0.52
VTA1-201ENST00000367621 TXNRD1Q16881 649 aa11.8□□□□□ -0.52
VTA1-201ENST00000367621 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
VTA1-201ENST00000367621 ZBTB38Q8NAP3 1195 aaPredicted RBP11.8□□□□□ -0.52
VTA1-201ENST00000367621 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
VTA1-201ENST00000367621 PLA2G12BQ9BX93 195 aa11.8□□□□□ -0.52
VTA1-201ENST00000367621 EXOC6BQ9Y2D4 811 aa11.8□□□□□ -0.52
VTA1-201ENST00000367621 KAT6BQ8WYB5 2073 aa11.79□□□□□ -0.52
VTA1-201ENST00000367621 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
VTA1-201ENST00000367621 SUSD4Q5VX71 490 aa11.79□□□□□ -0.52
VTA1-201ENST00000367621 CLEC4GQ6UXB4 293 aa11.79□□□□□ -0.52
VTA1-201ENST00000367621 OTUD7AQ8TE49 926 aaPredicted RBP11.79□□□□□ -0.52
VTA1-201ENST00000367621 FAM89AQ96GI7 184 aa11.79□□□□□ -0.52
VTA1-201ENST00000367621 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
VTA1-201ENST00000367621 NARFQ9UHQ1 456 aa11.79□□□□□ -0.52
VTA1-201ENST00000367621 PA2G4Q9UQ80 394 aaKnown RBP11.79□□□□□ -0.52
VTA1-201ENST00000367621 CDHR2Q9BYE9 1310 aa11.79□□□□□ -0.52
VTA1-201ENST00000367621 APBA3O96018 575 aa11.78□□□□□ -0.52
VTA1-201ENST00000367621 CSF1RP07333 972 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms