RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 GTF2F1P35269 517 aaKnown RBP eCLIP17.6■□□□□ 0.41
PRKN-204ENST00000366896 FAM182BQ5T319 152 aa17.6■□□□□ 0.41
PRKN-204ENST00000366896 ZNF496Q96IT1 587 aaPredicted RBP17.6■□□□□ 0.41
PRKN-204ENST00000366896 GLRX3O76003 335 aaKnown RBP17.59■□□□□ 0.41
PRKN-204ENST00000366896 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
PRKN-204ENST00000366896 HMGN5P82970 282 aaKnown RBP17.59■□□□□ 0.41
PRKN-204ENST00000366896 TCHHQ07283 1943 aa17.59■□□□□ 0.41
PRKN-204ENST00000366896 C5P01031 1676 aa17.58■□□□□ 0.41
PRKN-204ENST00000366896 GIGYF1O75420 1035 aaPredicted RBP17.58■□□□□ 0.41
PRKN-204ENST00000366896 ALDH1L1O75891 902 aa17.58■□□□□ 0.41
PRKN-204ENST00000366896 DNTTIP2Q5QJE6 756 aaKnown RBP17.58■□□□□ 0.41
PRKN-204ENST00000366896 USP48Q86UV5 1035 aa17.58■□□□□ 0.41
PRKN-204ENST00000366896 ATG3Q9NT62 314 aa17.58■□□□□ 0.41
PRKN-204ENST00000366896 ASAP1Q9ULH1 1129 aa17.58■□□□□ 0.41
PRKN-204ENST00000366896 CPA1P15085 419 aa17.58■□□□□ 0.4
PRKN-204ENST00000366896 AK2P54819 239 aa17.58■□□□□ 0.4
PRKN-204ENST00000366896 UTP14CQ5TAP6 766 aaKnown RBP17.58■□□□□ 0.4
PRKN-204ENST00000366896 KRT27Q7Z3Y8 459 aa17.58■□□□□ 0.4
PRKN-204ENST00000366896 KCNB2Q92953 911 aa17.58■□□□□ 0.4
PRKN-204ENST00000366896 FMNL2Q96PY5 1086 aa17.58■□□□□ 0.4
PRKN-204ENST00000366896 NHSQ6T4R5 1651 aa17.58■□□□□ 0.4
PRKN-204ENST00000366896 SBF2Q86WG5 1849 aa17.58■□□□□ 0.4
PRKN-204ENST00000366896 KCNQ2O43526 872 aa17.57■□□□□ 0.4
PRKN-204ENST00000366896 NOLC1Q14978 699 aaKnown RBP eCLIP17.57■□□□□ 0.4
PRKN-204ENST00000366896 RUFY3Q7L099 469 aa17.57■□□□□ 0.4
PRKN-204ENST00000366896 RUFY2Q8WXA3 655 aa17.57■□□□□ 0.4
PRKN-204ENST00000366896 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.57■□□□□ 0.4
PRKN-204ENST00000366896 OS9Q13438 667 aaPredicted RBP17.57■□□□□ 0.4
PRKN-204ENST00000366896 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
PRKN-204ENST00000366896 TM6SF1Q9BZW5 370 aa17.57■□□□□ 0.4
PRKN-204ENST00000366896 LIMCH1Q9UPQ0 1083 aa17.57■□□□□ 0.4
PRKN-204ENST00000366896 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
PRKN-204ENST00000366896 PROSER3Q2NL68 480 aa17.56■□□□□ 0.4
PRKN-204ENST00000366896 ERC1Q8IUD2 1116 aa17.56■□□□□ 0.4
PRKN-204ENST00000366896 DTNBO60941 627 aa17.56■□□□□ 0.4
PRKN-204ENST00000366896 DMTNQ08495 405 aa17.56■□□□□ 0.4
PRKN-204ENST00000366896 DBF4Q9UBU7 674 aaPredicted RBP17.56■□□□□ 0.4
PRKN-204ENST00000366896 LETM1O95202 739 aaPredicted RBP17.55■□□□□ 0.4
PRKN-204ENST00000366896 LARGE1O95461 756 aa17.55■□□□□ 0.4
PRKN-204ENST00000366896 PRDM10Q9NQV6 1147 aa17.55■□□□□ 0.4
PRKN-204ENST00000366896 PDIA4P13667 645 aaKnown RBP17.55■□□□□ 0.4
PRKN-204ENST00000366896 PA2G4Q9UQ80 394 aaKnown RBP17.55■□□□□ 0.4
PRKN-204ENST00000366896 CNPY2Q9Y2B0 182 aa17.55■□□□□ 0.4
PRKN-204ENST00000366896 ATP6V1DQ9Y5K8 247 aa17.55■□□□□ 0.4
PRKN-204ENST00000366896 SNRPA1P09661 255 aaKnown RBP17.54■□□□□ 0.4
PRKN-204ENST00000366896 ZSCAN22P10073 491 aaPredicted RBP17.54■□□□□ 0.4
PRKN-204ENST00000366896 PTH1RQ03431 593 aa17.54■□□□□ 0.4
PRKN-204ENST00000366896 CLASRPQ8N2M8 674 aaKnown RBP17.54■□□□□ 0.4
PRKN-204ENST00000366896 JARID2Q92833 1246 aaPredicted RBP17.54■□□□□ 0.4
PRKN-204ENST00000366896 SPTLC3Q9NUV7 552 aa17.54■□□□□ 0.4
PRKN-204ENST00000366896 USP25Q9UHP3 1055 aa17.54■□□□□ 0.4
PRKN-204ENST00000366896 MAP3K2Q9Y2U5 619 aa17.54■□□□□ 0.4
PRKN-204ENST00000366896 LAMB4A4D0S4 1761 aa17.54■□□□□ 0.4
PRKN-204ENST00000366896 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
PRKN-204ENST00000366896 ZSCAN20P17040 1043 aaPredicted RBP17.54■□□□□ 0.4
PRKN-204ENST00000366896 TPRNQ4KMQ1 711 aa17.54■□□□□ 0.4
PRKN-204ENST00000366896 ZNF830Q96NB3 372 aaPredicted RBP17.54■□□□□ 0.4
PRKN-204ENST00000366896 CASTP20810 708 aaKnown RBP17.53■□□□□ 0.4
PRKN-204ENST00000366896 PTF1AQ7RTS3 328 aa17.53■□□□□ 0.4
PRKN-204ENST00000366896 GPATCH3Q96I76 525 aa17.53■□□□□ 0.4
PRKN-204ENST00000366896 ZSCAN31Q96LW9 406 aaPredicted RBP17.53■□□□□ 0.4
PRKN-204ENST00000366896 BTAF1O14981 1849 aa17.53■□□□□ 0.4
PRKN-204ENST00000366896 CWF19L2Q2TBE0 894 aaKnown RBP17.53■□□□□ 0.4
PRKN-204ENST00000366896 VPS53Q5VIR6 699 aa17.53■□□□□ 0.4
PRKN-204ENST00000366896 DIAPH3Q9NSV4 1193 aa17.53■□□□□ 0.4
PRKN-204ENST00000366896 ECHDC1Q9NTX5 307 aa17.53■□□□□ 0.4
PRKN-204ENST00000366896 ADCY5O95622 1261 aa17.52■□□□□ 0.4
PRKN-204ENST00000366896 SYT1P21579 422 aa17.52■□□□□ 0.4
PRKN-204ENST00000366896 ADCK5Q3MIX3 580 aa17.52■□□□□ 0.4
PRKN-204ENST00000366896 CCDC183Q5T5S1 534 aa17.52■□□□□ 0.4
PRKN-204ENST00000366896 FAM196AQ6ZSG2 479 aa17.52■□□□□ 0.4
PRKN-204ENST00000366896 SH2B1Q9NRF2 756 aaPredicted RBP17.52■□□□□ 0.4
PRKN-204ENST00000366896 SNRKQ9NRH2 765 aa17.52■□□□□ 0.4
PRKN-204ENST00000366896 UTYO14607 1347 aa17.52■□□□□ 0.4
PRKN-204ENST00000366896 STX6O43752 255 aa17.52■□□□□ 0.39
PRKN-204ENST00000366896 TSC1Q92574 1164 aa17.52■□□□□ 0.39
PRKN-204ENST00000366896 TTC12Q9H892 705 aaPredicted RBP17.52■□□□□ 0.39
PRKN-204ENST00000366896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.52■□□□□ 0.39
PRKN-204ENST00000366896 UBE2HP62256 183 aa17.51■□□□□ 0.39
PRKN-204ENST00000366896 KSR2Q6VAB6 950 aa17.51■□□□□ 0.39
PRKN-204ENST00000366896 MPNDQ8N594 471 aa17.51■□□□□ 0.39
PRKN-204ENST00000366896 C9orf78Q9NZ63 289 aaPredicted RBP17.51■□□□□ 0.39
PRKN-204ENST00000366896 USP16Q9Y5T5 823 aa17.51■□□□□ 0.39
PRKN-204ENST00000366896 HIP1O00291 1037 aa17.51■□□□□ 0.39
PRKN-204ENST00000366896 PRPF40BQ6NWY9 871 aaKnown RBP17.51■□□□□ 0.39
PRKN-204ENST00000366896 EVI5LQ96CN4 794 aa17.51■□□□□ 0.39
PRKN-204ENST00000366896 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
PRKN-204ENST00000366896 HYPKQ9NX55 129 aa17.51■□□□□ 0.39
PRKN-204ENST00000366896 JAKMIP1Q96N16 626 aaKnown RBP17.5■□□□□ 0.39
PRKN-204ENST00000366896 SLC4A9Q96Q91 983 aa17.5■□□□□ 0.39
PRKN-204ENST00000366896 KIF3AQ9Y496 699 aa17.5■□□□□ 0.39
PRKN-204ENST00000366896 PALLDQ8WX93 1383 aa17.5■□□□□ 0.39
PRKN-204ENST00000366896 F13A1P00488 732 aa17.5■□□□□ 0.39
PRKN-204ENST00000366896 CCDC83Q8IWF9 413 aa17.5■□□□□ 0.39
PRKN-204ENST00000366896 SMC3Q9UQE7 1217 aa17.5■□□□□ 0.39
PRKN-204ENST00000366896 SMARCC1Q92922 1105 aaPredicted RBP17.49■□□□□ 0.39
PRKN-204ENST00000366896 ZHX1Q9UKY1 873 aaPredicted RBP17.49■□□□□ 0.39
PRKN-204ENST00000366896 TJP1Q07157 1748 aa17.49■□□□□ 0.39
PRKN-204ENST00000366896 IFIT2P09913 472 aaKnown RBP17.49■□□□□ 0.39
PRKN-204ENST00000366896 AACSQ86V21 672 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms