RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
CAPN9-203ENST00000366666 SIL1Q9H173 461 aa15.16■□□□□ 0.02
CAPN9-203ENST00000366666 HDAC5Q9UQL6 1122 aa15.16■□□□□ 0.02
CAPN9-203ENST00000366666 RGL2O15211 777 aa15.15■□□□□ 0.02
CAPN9-203ENST00000366666 FAM161AQ3B820 660 aa15.15■□□□□ 0.02
CAPN9-203ENST00000366666 CHD1LQ86WJ1 897 aa15.15■□□□□ 0.02
CAPN9-203ENST00000366666 C16orf71Q8IYS4 520 aaPredicted RBP15.15■□□□□ 0.02
CAPN9-203ENST00000366666 ZNF594Q96JF6 807 aaPredicted RBP15.15■□□□□ 0.02
CAPN9-203ENST00000366666 PLA2G12BQ9BX93 195 aa15.15■□□□□ 0.02
CAPN9-203ENST00000366666 PTPN12Q05209 780 aaKnown RBP15.15■□□□□ 0.02
CAPN9-203ENST00000366666 TTLL11Q8NHH1 800 aa15.15■□□□□ 0.02
CAPN9-203ENST00000366666 QSER1Q2KHR3 1735 aa15.14■□□□□ 0.01
CAPN9-203ENST00000366666 CSF1RP07333 972 aa15.14■□□□□ 0.01
CAPN9-203ENST00000366666 CTSWP56202 376 aa15.14■□□□□ 0.01
CAPN9-203ENST00000366666 DDR1Q08345 913 aa15.14■□□□□ 0.01
CAPN9-203ENST00000366666 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
CAPN9-203ENST00000366666 UPF1Q92900 1129 aaKnown RBP eCLIP15.14■□□□□ 0.01
CAPN9-203ENST00000366666 GREM2Q9H772 168 aa15.14■□□□□ 0.01
CAPN9-203ENST00000366666 TNRC6CQ9HCJ0 1690 aaKnown RBP15.14■□□□□ 0.01
CAPN9-203ENST00000366666 PDE8AO60658 829 aa15.14■□□□□ 0.01
CAPN9-203ENST00000366666 TM4SF1P30408 202 aa15.14■□□□□ 0.01
CAPN9-203ENST00000366666 NBPF5PQ86XG9 351 aaPredicted RBP15.14■□□□□ 0.01
CAPN9-203ENST00000366666 OTUD7AQ8TE49 926 aaPredicted RBP15.14■□□□□ 0.01
CAPN9-203ENST00000366666 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
CAPN9-203ENST00000366666 STK32BQ9NY57 414 aa15.13■□□□□ 0.01
CAPN9-203ENST00000366666 CCDC125Q86Z20 511 aa15.12■□□□□ 0.01
CAPN9-203ENST00000366666 IL1RAPL2Q9NP60 686 aa15.12■□□□□ 0.01
CAPN9-203ENST00000366666 CARMIL3Q8ND23 1372 aa15.12■□□□□ 0.01
CAPN9-203ENST00000366666 PUS3Q9BZE2 481 aaKnown RBP15.12■□□□□ 0.01
CAPN9-203ENST00000366666 SASH1O94885 1247 aa15.11■□□□□ 0.01
CAPN9-203ENST00000366666 ILDR2Q71H61 639 aa15.11■□□□□ 0.01
CAPN9-203ENST00000366666 SEC31BQ9NQW1 1179 aa15.11■□□□□ 0.01
CAPN9-203ENST00000366666 POLRMTO00411 1230 aaKnown RBP15.11■□□□□ 0.01
CAPN9-203ENST00000366666 ITGA6P23229 1130 aa15.11■□□□□ 0.01
CAPN9-203ENST00000366666 HMGB2P26583 209 aaKnown RBP15.11■□□□□ 0.01
CAPN9-203ENST00000366666 GTF2E1P29083 439 aaPredicted RBP15.11■□□□□ 0.01
CAPN9-203ENST00000366666 LRRC24Q50LG9 513 aa15.11■□□□□ 0.01
CAPN9-203ENST00000366666 RHPN1Q8TCX5 695 aa15.11■□□□□ 0.01
CAPN9-203ENST00000366666 COPRSQ9NQ92 184 aa15.11■□□□□ 0.01
CAPN9-203ENST00000366666 GOLGB1Q14789 3259 aaKnown RBP15.1■□□□□ 0.01
CAPN9-203ENST00000366666 SERPINB2P05120 415 aa15.1■□□□□ 0.01
CAPN9-203ENST00000366666 PRR5LQ6MZQ0 368 aa15.1■□□□□ 0.01
CAPN9-203ENST00000366666 TPTE2Q6XPS3 522 aa15.1■□□□□ 0.01
CAPN9-203ENST00000366666 FLAD1Q8NFF5 587 aa15.1■□□□□ 0.01
CAPN9-203ENST00000366666 DDRGK1Q96HY6 314 aa15.1■□□□□ 0.01
CAPN9-203ENST00000366666 LRRCC1Q9C099 1032 aa15.1■□□□□ 0.01
CAPN9-203ENST00000366666 OS9Q13438 667 aaPredicted RBP15.09■□□□□ 0.01
CAPN9-203ENST00000366666 CCDC57Q2TAC2 916 aa15.09■□□□□ 0.01
CAPN9-203ENST00000366666 SLC10A5Q5PT55 438 aa15.09■□□□□ 0.01
CAPN9-203ENST00000366666 ATG9AQ7Z3C6 839 aa15.09■□□□□ 0.01
CAPN9-203ENST00000366666 NYXQ9GZU5 481 aa15.09■□□□□ 0.01
CAPN9-203ENST00000366666 ANKRD31Q8N7Z5 1873 aa15.09■□□□□ 0.01
CAPN9-203ENST00000366666 IFIT5Q13325 482 aaKnown RBP15.08■□□□□ 0.01
CAPN9-203ENST00000366666 CNBD1Q8NA66 436 aa15.08■□□□□ 0.01
CAPN9-203ENST00000366666 NRXN2Q9P2S2 1712 aa15.08■□□□□ 0.01
CAPN9-203ENST00000366666 NPHP1O15259 732 aa15.08■□□□□ 0
CAPN9-203ENST00000366666 MMP10P09238 476 aa15.08■□□□□ 0
CAPN9-203ENST00000366666 G3BP1Q13283 466 aaKnown RBP eCLIP15.08■□□□□ 0
CAPN9-203ENST00000366666 TSHZ3Q63HK5 1081 aa15.08■□□□□ 0
CAPN9-203ENST00000366666 NLGN1Q8N2Q7 840 aa15.08■□□□□ 0
CAPN9-203ENST00000366666 RAB11FIP3O75154 756 aa15.07■□□□□ 0
CAPN9-203ENST00000366666 PLEKHM2Q8IWE5 1019 aa15.07■□□□□ 0
CAPN9-203ENST00000366666 KIF1BPQ96EK5 621 aa15.07■□□□□ 0
CAPN9-203ENST00000366666 TFCP2Q12800 502 aa15.07■□□□□ 0
CAPN9-203ENST00000366666 SLC51AQ86UW1 340 aa15.07■□□□□ 0
CAPN9-203ENST00000366666 ANKRD18BA2A2Z9 1011 aa15.06■□□□□ 0
CAPN9-203ENST00000366666 SALL3Q9BXA9 1300 aa15.06■□□□□ 0
CAPN9-203ENST00000366666 EYA2O00167 538 aa15.05■□□□□ 0
CAPN9-203ENST00000366666 CCDC152Q4G0S7 254 aa15.05■□□□□ 0
CAPN9-203ENST00000366666 LRP5O75197 1615 aa15.05■□□□□ -0
CAPN9-203ENST00000366666 SF3B3Q15393 1217 aaKnown RBP15.05■□□□□ -0
CAPN9-203ENST00000366666 HSP90AB4PQ58FF6 505 aa15.05■□□□□ -0
CAPN9-203ENST00000366666 TAF7LQ5H9L4 462 aa15.05■□□□□ -0
CAPN9-203ENST00000366666 EAF2Q96CJ1 260 aaPredicted RBP15.05■□□□□ -0
CAPN9-203ENST00000366666 TLR7Q9NYK1 1049 aaKnown RBP15.05■□□□□ -0
CAPN9-203ENST00000366666 LDHAL6AQ6ZMR3 332 aa15.04■□□□□ -0
CAPN9-203ENST00000366666 NLRP3Q96P20 1036 aa15.04■□□□□ -0
CAPN9-203ENST00000366666 CELF1Q92879 486 aaKnown RBP15.04■□□□□ -0
CAPN9-203ENST00000366666 RIPOR2Q9Y4F9 1068 aa15.04■□□□□ -0
CAPN9-203ENST00000366666 RIC1Q4ADV7 1423 aa15.03■□□□□ -0
CAPN9-203ENST00000366666 ERC1Q8IUD2 1116 aa15.03■□□□□ -0
CAPN9-203ENST00000366666 CCDC8Q9H0W5 538 aaPredicted RBP15.03■□□□□ -0
CAPN9-203ENST00000366666 RTL9Q8NET4 1388 aa15.03■□□□□ -0
CAPN9-203ENST00000366666 A0A1B0GUL6 1792 aa15.03■□□□□ -0
CAPN9-203ENST00000366666 R3HDM1Q15032 1099 aaKnown RBP15.02■□□□□ -0
CAPN9-203ENST00000366666 AACSQ86V21 672 aa15.02■□□□□ -0
CAPN9-203ENST00000366666 IL27Q8NEV9 243 aa15.02■□□□□ -0
CAPN9-203ENST00000366666 HELBQ8NG08 1087 aaPredicted RBP15.02■□□□□ -0
CAPN9-203ENST00000366666 COL11A2P13942 1736 aaPredicted RBP15.02■□□□□ -0
CAPN9-203ENST00000366666 SNAP23O00161 211 aa15.02□□□□□ -0.01
CAPN9-203ENST00000366666 CIAO1O76071 339 aa15.02□□□□□ -0.01
CAPN9-203ENST00000366666 HSP90B1P14625 803 aaKnown RBP15.02□□□□□ -0.01
CAPN9-203ENST00000366666 GSPT1P15170 499 aaKnown RBP15.02□□□□□ -0.01
CAPN9-203ENST00000366666 IL15P40933 162 aaPredicted RBP15.02□□□□□ -0.01
CAPN9-203ENST00000366666 PDE1AP54750 535 aa15.02□□□□□ -0.01
CAPN9-203ENST00000366666 PARP3Q9Y6F1 533 aa15.02□□□□□ -0.01
CAPN9-203ENST00000366666 WTIPA6NIX2 430 aaPredicted RBP15.01□□□□□ -0.01
CAPN9-203ENST00000366666 TIMM10P62072 90 aa15.01□□□□□ -0.01
CAPN9-203ENST00000366666 ST5P78524 1137 aa15.01□□□□□ -0.01
CAPN9-203ENST00000366666 CLASRPQ8N2M8 674 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms