RNA–Protein interactions for RNA: ENST00000360958.6

TPM2-202, Transcript of tropomyosin 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene TPM2, Length 1,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-202ENST00000360958 CCDC93Q567U6 631 aa18.91■□□□□ 0.62
TPM2-202ENST00000360958 RTL5Q5HYW3 569 aaPredicted RBP18.91■□□□□ 0.62
TPM2-202ENST00000360958 UBE3BQ7Z3V4 1068 aa18.91■□□□□ 0.62
TPM2-202ENST00000360958 GRAPLQ8TC17 118 aaPredicted RBP18.91■□□□□ 0.62
TPM2-202ENST00000360958 MYH3P11055 1940 aa18.91■□□□□ 0.62
TPM2-202ENST00000360958 NFKBIEO00221 500 aa18.9■□□□□ 0.62
TPM2-202ENST00000360958 CCT4P50991 539 aaKnown RBP18.9■□□□□ 0.62
TPM2-202ENST00000360958 CTSWP56202 376 aa18.9■□□□□ 0.62
TPM2-202ENST00000360958 SLC4A10Q6U841 1118 aa18.9■□□□□ 0.62
TPM2-202ENST00000360958 RTKN2Q8IZC4 609 aa18.9■□□□□ 0.62
TPM2-202ENST00000360958 CSF1RP07333 972 aa18.89■□□□□ 0.61
TPM2-202ENST00000360958 TTLL11Q8NHH1 800 aa18.89■□□□□ 0.61
TPM2-202ENST00000360958 ATP6V0A2Q9Y487 856 aa18.89■□□□□ 0.61
TPM2-202ENST00000360958 LRRC37AA6NMS7 1700 aa18.88■□□□□ 0.61
TPM2-202ENST00000360958 PPEF1O14829 653 aaPredicted RBP18.88■□□□□ 0.61
TPM2-202ENST00000360958 BCAR3O75815 825 aa18.88■□□□□ 0.61
TPM2-202ENST00000360958 ZC3H4Q9UPT8 1303 aaKnown RBP18.88■□□□□ 0.61
TPM2-202ENST00000360958 SBF1O95248 1867 aa18.88■□□□□ 0.61
TPM2-202ENST00000360958 LMNB1P20700 586 aa18.87■□□□□ 0.61
TPM2-202ENST00000360958 INTS3Q68E01 1043 aaKnown RBP18.87■□□□□ 0.61
TPM2-202ENST00000360958 ATF7IPQ6VMQ6 1270 aa18.87■□□□□ 0.61
TPM2-202ENST00000360958 SP8Q8IXZ3 490 aa18.87■□□□□ 0.61
TPM2-202ENST00000360958 PSMD1Q99460 953 aa18.87■□□□□ 0.61
TPM2-202ENST00000360958 C9orf78Q9NZ63 289 aaPredicted RBP18.87■□□□□ 0.61
TPM2-202ENST00000360958 YY1P25490 414 aa18.86■□□□□ 0.61
TPM2-202ENST00000360958 FKBP4Q02790 459 aaKnown RBP eCLIP18.86■□□□□ 0.61
TPM2-202ENST00000360958 JARID2Q92833 1246 aaPredicted RBP18.86■□□□□ 0.61
TPM2-202ENST00000360958 TAOK3Q9H2K8 898 aa18.86■□□□□ 0.61
TPM2-202ENST00000360958 TRIM27P14373 513 aa18.85■□□□□ 0.61
TPM2-202ENST00000360958 RPS8P62241 208 aaKnown RBP18.85■□□□□ 0.61
TPM2-202ENST00000360958 FOXO4P98177 505 aa18.85■□□□□ 0.61
TPM2-202ENST00000360958 USP44Q9H0E7 712 aa18.85■□□□□ 0.61
TPM2-202ENST00000360958 ZKSCAN2Q63HK3 967 aa18.84■□□□□ 0.61
TPM2-202ENST00000360958 CELF1Q92879 486 aaKnown RBP18.84■□□□□ 0.61
TPM2-202ENST00000360958 CDC5LQ99459 802 aaKnown RBP18.84■□□□□ 0.61
TPM2-202ENST00000360958 RTFDC1Q9BY42 306 aaPredicted RBP18.84■□□□□ 0.61
TPM2-202ENST00000360958 TMX4Q9H1E5 349 aaPredicted RBP18.84■□□□□ 0.61
TPM2-202ENST00000360958 VPS33BQ9H267 617 aa18.84■□□□□ 0.61
TPM2-202ENST00000360958 NBPF7P0C2Y1 421 aaPredicted RBP18.83■□□□□ 0.6
TPM2-202ENST00000360958 RASSF7Q02833 373 aa18.83■□□□□ 0.6
TPM2-202ENST00000360958 C9orf131Q5VYM1 1079 aa18.83■□□□□ 0.6
TPM2-202ENST00000360958 GREM2Q9H772 168 aa18.83■□□□□ 0.6
TPM2-202ENST00000360958 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
TPM2-202ENST00000360958 COL4A1P02462 1669 aa18.82■□□□□ 0.6
TPM2-202ENST00000360958 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
TPM2-202ENST00000360958 TAF1P21675 1872 aa18.82■□□□□ 0.6
TPM2-202ENST00000360958 PRELPP51888 382 aa18.82■□□□□ 0.6
TPM2-202ENST00000360958 RABL6Q3YEC7 729 aaPredicted RBP18.82■□□□□ 0.6
TPM2-202ENST00000360958 KAZALD1Q96I82 304 aa18.82■□□□□ 0.6
TPM2-202ENST00000360958 SEC31BQ9NQW1 1179 aa18.82■□□□□ 0.6
TPM2-202ENST00000360958 HDAC5Q9UQL6 1122 aa18.82■□□□□ 0.6
TPM2-202ENST00000360958 LTBP1Q14766 1721 aa18.81■□□□□ 0.6
TPM2-202ENST00000360958 OLFM4Q6UX06 510 aa18.81■□□□□ 0.6
TPM2-202ENST00000360958 ANKRD18AQ8IVF6 992 aa18.81■□□□□ 0.6
TPM2-202ENST00000360958 RCAN3Q9UKA8 241 aa18.81■□□□□ 0.6
TPM2-202ENST00000360958 SUPT20HQ8NEM7 779 aa18.8■□□□□ 0.6
TPM2-202ENST00000360958 FRAT1Q92837 279 aaPredicted RBP18.8■□□□□ 0.6
TPM2-202ENST00000360958 BSDC1Q9NW68 430 aaPredicted RBP18.8■□□□□ 0.6
TPM2-202ENST00000360958 PODXL2Q9NZ53 605 aa18.8■□□□□ 0.6
TPM2-202ENST00000360958 RNF181Q9P0P0 153 aa18.8■□□□□ 0.6
TPM2-202ENST00000360958 ITGA6P23229 1130 aa18.79■□□□□ 0.6
TPM2-202ENST00000360958 FAM161AQ3B820 660 aa18.79■□□□□ 0.6
TPM2-202ENST00000360958 EPHA10Q5JZY3 1008 aa18.79■□□□□ 0.6
TPM2-202ENST00000360958 LMBR1LQ6UX01 489 aa18.79■□□□□ 0.6
TPM2-202ENST00000360958 SUCLG2Q96I99 432 aa18.79■□□□□ 0.6
TPM2-202ENST00000360958 DUOX1Q9NRD9 1551 aa18.79■□□□□ 0.6
TPM2-202ENST00000360958 MS4A1P11836 297 aa18.78■□□□□ 0.6
TPM2-202ENST00000360958 DPP8Q6V1X1 898 aaPredicted RBP18.78■□□□□ 0.6
TPM2-202ENST00000360958 MPNDQ8N594 471 aa18.78■□□□□ 0.6
TPM2-202ENST00000360958 CCDC88AQ3V6T2 1871 aa18.77■□□□□ 0.6
TPM2-202ENST00000360958 TIAM2Q8IVF5 1701 aa18.77■□□□□ 0.6
TPM2-202ENST00000360958 ANKRD18BA2A2Z9 1011 aa18.77■□□□□ 0.6
TPM2-202ENST00000360958 GNAI3P08754 354 aa18.77■□□□□ 0.6
TPM2-202ENST00000360958 UBTFL1P0CB47 393 aaPredicted RBP18.77■□□□□ 0.6
TPM2-202ENST00000360958 IARSP41252 1262 aaKnown RBP18.77■□□□□ 0.6
TPM2-202ENST00000360958 IFIT5Q13325 482 aaKnown RBP18.77■□□□□ 0.6
TPM2-202ENST00000360958 BICC1Q9H694 974 aaKnown RBP18.77■□□□□ 0.6
TPM2-202ENST00000360958 IGHMBP2P38935 993 aaKnown RBP18.76■□□□□ 0.59
TPM2-202ENST00000360958 CCDC57Q2TAC2 916 aa18.76■□□□□ 0.59
TPM2-202ENST00000360958 DZIP1LQ8IYY4 767 aaKnown RBP18.76■□□□□ 0.59
TPM2-202ENST00000360958 ANKRD44Q8N8A2 993 aa18.76■□□□□ 0.59
TPM2-202ENST00000360958 CCDC85AQ96PX6 553 aaPredicted RBP18.76■□□□□ 0.59
TPM2-202ENST00000360958 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
TPM2-202ENST00000360958 ZNF784Q8NCA9 323 aaPredicted RBP18.75■□□□□ 0.59
TPM2-202ENST00000360958 ZNF277Q9NRM2 450 aaPredicted RBP18.75■□□□□ 0.59
TPM2-202ENST00000360958 XDHP47989 1333 aa18.74■□□□□ 0.59
TPM2-202ENST00000360958 GPSM2P81274 684 aa18.74■□□□□ 0.59
TPM2-202ENST00000360958 KIAA2012Q0VF49 1180 aa18.74■□□□□ 0.59
TPM2-202ENST00000360958 FTSJ3Q8IY81 847 aaKnown RBP18.74■□□□□ 0.59
TPM2-202ENST00000360958 MEIS3Q99687 375 aa18.74■□□□□ 0.59
TPM2-202ENST00000360958 MINPP1Q9UNW1 487 aa18.74■□□□□ 0.59
TPM2-202ENST00000360958 TNNQ9UQP3 1299 aa18.74■□□□□ 0.59
TPM2-202ENST00000360958 FZD9O00144 591 aa18.73■□□□□ 0.59
TPM2-202ENST00000360958 TMEM57Q8N5G2 664 aa18.73■□□□□ 0.59
TPM2-202ENST00000360958 CLUAP1Q96AJ1 413 aa18.73■□□□□ 0.59
TPM2-202ENST00000360958 MPHOSPH8Q99549 860 aa18.73■□□□□ 0.59
TPM2-202ENST00000360958 NSFL1CQ9UNZ2 370 aaKnown RBP18.73■□□□□ 0.59
TPM2-202ENST00000360958 RLBP1P12271 317 aa18.72■□□□□ 0.59
TPM2-202ENST00000360958 MTX1Q13505 466 aa18.72■□□□□ 0.59
TPM2-202ENST00000360958 TBC1D16Q8TBP0 767 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms