RNA–Protein interactions for RNA: ENST00000360027.4

SH2D1A-201, Transcript of SH2 domain containing 1A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH2D1A, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1A-201ENST00000360027 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
SH2D1A-201ENST00000360027 TMX4Q9H1E5 349 aaPredicted RBP12.95□□□□□ -0.34
SH2D1A-201ENST00000360027 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
SH2D1A-201ENST00000360027 SNED1Q8TER0 1413 aa12.95□□□□□ -0.34
SH2D1A-201ENST00000360027 ANKRD31Q8N7Z5 1873 aa12.94□□□□□ -0.34
SH2D1A-201ENST00000360027 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
SH2D1A-201ENST00000360027 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
SH2D1A-201ENST00000360027 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
SH2D1A-201ENST00000360027 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
SH2D1A-201ENST00000360027 ATP6V0A2Q9Y487 856 aa12.94□□□□□ -0.34
SH2D1A-201ENST00000360027 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 TOMM70O94826 608 aa12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 NEXNQ0ZGT2 675 aa12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 FLIIQ13045 1269 aa12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 GRAPQ13588 217 aa12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 C3orf67Q6ZVT6 689 aa12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 SP8Q8IXZ3 490 aa12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 GRAPLQ8TC17 118 aaPredicted RBP12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 RTFDC1Q9BY42 306 aaPredicted RBP12.93□□□□□ -0.34
SH2D1A-201ENST00000360027 ABCC4O15439 1325 aa12.92□□□□□ -0.34
SH2D1A-201ENST00000360027 CDHR2Q9BYE9 1310 aa12.92□□□□□ -0.34
SH2D1A-201ENST00000360027 IRS4O14654 1257 aaPredicted RBP12.92□□□□□ -0.34
SH2D1A-201ENST00000360027 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
SH2D1A-201ENST00000360027 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
SH2D1A-201ENST00000360027 MYD88Q99836 296 aa12.92□□□□□ -0.34
SH2D1A-201ENST00000360027 MAP3K2Q9Y2U5 619 aa12.92□□□□□ -0.34
SH2D1A-201ENST00000360027 SALL2Q9Y467 1007 aaPredicted RBP12.92□□□□□ -0.34
SH2D1A-201ENST00000360027 NUP98P52948 1817 aa12.92□□□□□ -0.34
SH2D1A-201ENST00000360027 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
SH2D1A-201ENST00000360027 VEGFAP15692 232 aaPredicted RBP12.91□□□□□ -0.34
SH2D1A-201ENST00000360027 POTEGQ6S5H5 508 aa12.91□□□□□ -0.34
SH2D1A-201ENST00000360027 SYNE4Q8N205 404 aa12.91□□□□□ -0.34
SH2D1A-201ENST00000360027 SUPT20HQ8NEM7 779 aa12.91□□□□□ -0.34
SH2D1A-201ENST00000360027 RBM46Q8TBY0 533 aaKnown RBP12.91□□□□□ -0.34
SH2D1A-201ENST00000360027 COL11A2P13942 1736 aaPredicted RBP12.91□□□□□ -0.34
SH2D1A-201ENST00000360027 FZD9O00144 591 aa12.9□□□□□ -0.34
SH2D1A-201ENST00000360027 PDE8AO60658 829 aa12.9□□□□□ -0.34
SH2D1A-201ENST00000360027 IGKV5-2P06315 115 aa12.9□□□□□ -0.34
SH2D1A-201ENST00000360027 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
SH2D1A-201ENST00000360027 IARSP41252 1262 aaKnown RBP12.9□□□□□ -0.34
SH2D1A-201ENST00000360027 SLFN5Q08AF3 891 aa12.9□□□□□ -0.34
SH2D1A-201ENST00000360027 LINS1Q8NG48 757 aa12.9□□□□□ -0.34
SH2D1A-201ENST00000360027 ZNF526Q8TF50 670 aaPredicted RBP12.9□□□□□ -0.34
SH2D1A-201ENST00000360027 L3MBTL3Q96JM7 780 aaPredicted RBP12.9□□□□□ -0.34
SH2D1A-201ENST00000360027 NEURL1BA8MQ27 555 aa12.89□□□□□ -0.35
SH2D1A-201ENST00000360027 H7C1W4 665 aa12.89□□□□□ -0.35
SH2D1A-201ENST00000360027 FSTL1Q12841 308 aa12.89□□□□□ -0.35
SH2D1A-201ENST00000360027 FKBP5Q13451 457 aaPredicted RBP12.89□□□□□ -0.35
SH2D1A-201ENST00000360027 CCDC152Q4G0S7 254 aa12.89□□□□□ -0.35
SH2D1A-201ENST00000360027 TRMT2AQ8IZ69 625 aaKnown RBP12.89□□□□□ -0.35
SH2D1A-201ENST00000360027 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
SH2D1A-201ENST00000360027 PLA2G12BQ9BX93 195 aa12.89□□□□□ -0.35
SH2D1A-201ENST00000360027 NMRK2Q9NPI5 230 aa12.89□□□□□ -0.35
SH2D1A-201ENST00000360027 ZNF277Q9NRM2 450 aaPredicted RBP12.89□□□□□ -0.35
SH2D1A-201ENST00000360027 G2E3Q7L622 706 aa12.88□□□□□ -0.35
SH2D1A-201ENST00000360027 JDP2Q8WYK2 163 aa12.88□□□□□ -0.35
SH2D1A-201ENST00000360027 ARFGEF2Q9Y6D5 1785 aa12.88□□□□□ -0.35
SH2D1A-201ENST00000360027 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
SH2D1A-201ENST00000360027 TNRC6CQ9HCJ0 1690 aaKnown RBP12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 SENP3-EIF4A1A0A087X0R7 540 aa12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 IQCA1LA6NCM1 817 aa12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 RPS8P62241 208 aaKnown RBP12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 GCKRQ14397 625 aa12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 DIEXFQ68CQ4 756 aaKnown RBP12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 OLFM4Q6UX06 510 aa12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 C16orf71Q8IYS4 520 aaPredicted RBP12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 MPNDQ8N594 471 aa12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 RRAGCQ9HB90 399 aa12.87□□□□□ -0.35
SH2D1A-201ENST00000360027 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
SH2D1A-201ENST00000360027 KIAA2012Q0VF49 1180 aa12.86□□□□□ -0.35
SH2D1A-201ENST00000360027 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
SH2D1A-201ENST00000360027 GPC2Q8N158 579 aa12.86□□□□□ -0.35
SH2D1A-201ENST00000360027 PODXL2Q9NZ53 605 aa12.86□□□□□ -0.35
SH2D1A-201ENST00000360027 FER1L6Q2WGJ9 1857 aa12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 POTECB2RU33 542 aa12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 TCERG1O14776 1098 aaKnown RBP12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 ALDH1L1O75891 902 aa12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 HSPA6P17066 643 aa12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 CASP7P55210 303 aa12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 CTSWP56202 376 aa12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 LARGE2Q8N3Y3 721 aa12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 PTPRCP08575 1304 aa12.85□□□□□ -0.35
SH2D1A-201ENST00000360027 CSF1RP07333 972 aa12.84□□□□□ -0.35
SH2D1A-201ENST00000360027 EIF6P56537 245 aaKnown RBP12.84□□□□□ -0.35
SH2D1A-201ENST00000360027 CWF19L2Q2TBE0 894 aaKnown RBP12.84□□□□□ -0.35
SH2D1A-201ENST00000360027 SMC1BQ8NDV3 1235 aa12.84□□□□□ -0.35
SH2D1A-201ENST00000360027 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
SH2D1A-201ENST00000360027 CELF1Q92879 486 aaKnown RBP12.84□□□□□ -0.35
SH2D1A-201ENST00000360027 CDC5LQ99459 802 aaKnown RBP12.84□□□□□ -0.35
SH2D1A-201ENST00000360027 ANKRD36CQ5JPF3 1778 aa12.84□□□□□ -0.35
SH2D1A-201ENST00000360027 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
SH2D1A-201ENST00000360027 DDNO94850 711 aaPredicted RBP12.83□□□□□ -0.36
SH2D1A-201ENST00000360027 RTL5Q5HYW3 569 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms