RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
TRAPPC4-201ENST00000359005 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-201ENST00000359005 AOX1Q06278 1338 aa13.21□□□□□ -0.29
TRAPPC4-201ENST00000359005 KIF3CO14782 793 aa13.21□□□□□ -0.29
TRAPPC4-201ENST00000359005 SURF6O75683 361 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-201ENST00000359005 RASSF7Q02833 373 aa13.21□□□□□ -0.29
TRAPPC4-201ENST00000359005 CWF19L2Q2TBE0 894 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-201ENST00000359005 BRIP1Q9BX63 1249 aa13.21□□□□□ -0.29
TRAPPC4-201ENST00000359005 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.29
TRAPPC4-201ENST00000359005 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
TRAPPC4-201ENST00000359005 H0YIN7 160 aa13.2□□□□□ -0.3
TRAPPC4-201ENST00000359005 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-201ENST00000359005 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAPPC4-201ENST00000359005 TTLL6Q8N841 843 aa13.2□□□□□ -0.3
TRAPPC4-201ENST00000359005 OSBPL3Q9H4L5 887 aa13.2□□□□□ -0.3
TRAPPC4-201ENST00000359005 GPBP1L1Q9HC44 474 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-201ENST00000359005 NOP58Q9Y2X3 529 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-201ENST00000359005 AFDNP55196 1824 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-201ENST00000359005 CHD4Q14839 1912 aa13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 FAM177BA6PVY3 158 aa13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 ERVV-1B6SEH8 477 aa13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 CDC45O75419 566 aa13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 IGKV5-2P06315 115 aa13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 CLASRPQ8N2M8 674 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 ZNF622Q969S3 477 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 IPO9Q96P70 1041 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 ZNF219Q9P2Y4 722 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-201ENST00000359005 PNMA6EA0A0J9YXQ4 647 aa13.18□□□□□ -0.3
TRAPPC4-201ENST00000359005 NFKBIEO00221 500 aa13.18□□□□□ -0.3
TRAPPC4-201ENST00000359005 TCIRG1Q13488 830 aa13.18□□□□□ -0.3
TRAPPC4-201ENST00000359005 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
TRAPPC4-201ENST00000359005 SKAP1Q86WV1 359 aa13.18□□□□□ -0.3
TRAPPC4-201ENST00000359005 PLEKHM2Q8IWE5 1019 aa13.18□□□□□ -0.3
TRAPPC4-201ENST00000359005 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
TRAPPC4-201ENST00000359005 NMRK2Q9NPI5 230 aa13.18□□□□□ -0.3
TRAPPC4-201ENST00000359005 NIP7Q9Y221 180 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRAPPC4-201ENST00000359005 EXOC6BQ9Y2D4 811 aa13.18□□□□□ -0.3
TRAPPC4-201ENST00000359005 MAP3K15Q6ZN16 1313 aa13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 APBB1O00213 710 aa13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 ERC2O15083 957 aa13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 RGL2O15211 777 aa13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 C21orf2O43822 256 aa13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 SRGNP10124 158 aa13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 MX1P20591 662 aa13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 OLFM4Q6UX06 510 aa13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 NBPF5PQ86XG9 351 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 RNF181Q9P0P0 153 aa13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 ZNF652Q9Y2D9 606 aa13.17□□□□□ -0.3
TRAPPC4-201ENST00000359005 KLRG2A4D1S0 409 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 H7C1W4 665 aa13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 PDE6BP35913 854 aa13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 BECN1Q14457 450 aa13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 SLC51AQ86UW1 340 aa13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 RHPN1Q8TCX5 695 aa13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 C7orf43Q8WVR3 580 aa13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 ZBTB3Q9H5J0 574 aa13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-201ENST00000359005 TTC41PQ6P2S7 1318 aa13.15□□□□□ -0.3
TRAPPC4-201ENST00000359005 UBN2Q6ZU65 1347 aa13.15□□□□□ -0.3
TRAPPC4-201ENST00000359005 IFIT2P09913 472 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-201ENST00000359005 GPTP24298 496 aa13.15□□□□□ -0.3
TRAPPC4-201ENST00000359005 PDE1AP54750 535 aa13.15□□□□□ -0.3
TRAPPC4-201ENST00000359005 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
TRAPPC4-201ENST00000359005 SUCLG2Q96I99 432 aa13.15□□□□□ -0.3
TRAPPC4-201ENST00000359005 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
TRAPPC4-201ENST00000359005 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
TRAPPC4-201ENST00000359005 NRXN2Q9P2S2 1712 aa13.15□□□□□ -0.3
TRAPPC4-201ENST00000359005 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-201ENST00000359005 ERFEQ4G0M1 354 aa13.14□□□□□ -0.31
TRAPPC4-201ENST00000359005 SUSD4Q5VX71 490 aa13.14□□□□□ -0.31
TRAPPC4-201ENST00000359005 ZNF34Q8IZ26 560 aa13.14□□□□□ -0.31
TRAPPC4-201ENST00000359005 IL27Q8NEV9 243 aa13.14□□□□□ -0.31
TRAPPC4-201ENST00000359005 ISCA1Q9BUE6 129 aa13.14□□□□□ -0.31
TRAPPC4-201ENST00000359005 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
TRAPPC4-201ENST00000359005 ABCC12Q96J65 1359 aa13.13□□□□□ -0.31
TRAPPC4-201ENST00000359005 ATP5J2-PTCD1G3V325 749 aa13.13□□□□□ -0.31
TRAPPC4-201ENST00000359005 REC8O95072 547 aa13.13□□□□□ -0.31
TRAPPC4-201ENST00000359005 PCCAP05165 728 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-201ENST00000359005 ST5P78524 1137 aa13.13□□□□□ -0.31
TRAPPC4-201ENST00000359005 PARP10Q53GL7 1025 aa13.13□□□□□ -0.31
TRAPPC4-201ENST00000359005 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
TRAPPC4-201ENST00000359005 PRPF40BQ6NWY9 871 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-201ENST00000359005 TPTE2Q6XPS3 522 aa13.13□□□□□ -0.31
TRAPPC4-201ENST00000359005 MASTLQ96GX5 879 aa13.13□□□□□ -0.31
TRAPPC4-201ENST00000359005 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-201ENST00000359005 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-201ENST00000359005 LMNB1P20700 586 aa13.12□□□□□ -0.31
TRAPPC4-201ENST00000359005 SYNE4Q8N205 404 aa13.12□□□□□ -0.31
TRAPPC4-201ENST00000359005 ZBTB38Q8NAP3 1195 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-201ENST00000359005 CDHR2Q9BYE9 1310 aa13.12□□□□□ -0.31
TRAPPC4-201ENST00000359005 BRCA1P38398 1863 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-201ENST00000359005 NPHP1O15259 732 aa13.11□□□□□ -0.31
TRAPPC4-201ENST00000359005 CNTROBQ8N137 903 aa13.11□□□□□ -0.31
TRAPPC4-201ENST00000359005 CNKSR1Q969H4 720 aa13.11□□□□□ -0.31
TRAPPC4-201ENST00000359005 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms