RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 NUP98P52948 1817 aa16.17■□□□□ 0.18
NFIX-201ENST00000358552 IRS4O14654 1257 aaPredicted RBP16.17■□□□□ 0.18
NFIX-201ENST00000358552 RILPL2Q969X0 211 aa16.17■□□□□ 0.18
NFIX-201ENST00000358552 FAM89AQ96GI7 184 aa16.17■□□□□ 0.18
NFIX-201ENST00000358552 ANKRD18BA2A2Z9 1011 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 ADRA2BP18089 450 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 KCNQ4P56696 695 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 TNNI3KQ59H18 835 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 TAF7LQ5H9L4 462 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 LINC00116Q8NCU8 138 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 EAF2Q96CJ1 260 aaPredicted RBP16.16■□□□□ 0.18
NFIX-201ENST00000358552 SIL1Q9H173 461 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 RTCBQ9Y3I0 505 aaKnown RBP16.16■□□□□ 0.18
NFIX-201ENST00000358552 FPGT-TNNI3KV9GXZ4 949 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 APBA3O96018 575 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 MCCP23508 829 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 CTSWP56202 376 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 CEP126Q9P2H0 1117 aa16.16■□□□□ 0.18
NFIX-201ENST00000358552 C4BP0C0L5 1744 aa16.15■□□□□ 0.18
NFIX-201ENST00000358552 GPTP24298 496 aa16.15■□□□□ 0.18
NFIX-201ENST00000358552 CHMLP26374 656 aa16.15■□□□□ 0.18
NFIX-201ENST00000358552 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
NFIX-201ENST00000358552 NARFQ9UHQ1 456 aa16.15■□□□□ 0.18
NFIX-201ENST00000358552 ATP5JP18859 108 aa16.14■□□□□ 0.17
NFIX-201ENST00000358552 TTLL11Q8NHH1 800 aa16.14■□□□□ 0.17
NFIX-201ENST00000358552 JARID2Q92833 1246 aaPredicted RBP16.14■□□□□ 0.17
NFIX-201ENST00000358552 LRRC4BQ9NT99 713 aa16.14■□□□□ 0.17
NFIX-201ENST00000358552 ZPR1O75312 459 aa16.14■□□□□ 0.17
NFIX-201ENST00000358552 TFCP2Q12800 502 aa16.14■□□□□ 0.17
NFIX-201ENST00000358552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.14■□□□□ 0.17
NFIX-201ENST00000358552 ESYT1Q9BSJ8 1104 aa16.14■□□□□ 0.17
NFIX-201ENST00000358552 USP26Q9BXU7 913 aa16.14■□□□□ 0.17
NFIX-201ENST00000358552 NIP7Q9Y221 180 aaKnown RBP eCLIP16.14■□□□□ 0.17
NFIX-201ENST00000358552 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
NFIX-201ENST00000358552 NFKBIBQ15653 356 aa16.13■□□□□ 0.17
NFIX-201ENST00000358552 TXNRD1Q16881 649 aa16.13■□□□□ 0.17
NFIX-201ENST00000358552 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
NFIX-201ENST00000358552 ATG9AQ7Z3C6 839 aa16.13■□□□□ 0.17
NFIX-201ENST00000358552 PROM2Q8N271 834 aa16.13■□□□□ 0.17
NFIX-201ENST00000358552 SNX21Q969T3 373 aa16.13■□□□□ 0.17
NFIX-201ENST00000358552 UBR3Q6ZT12 1888 aa16.12■□□□□ 0.17
NFIX-201ENST00000358552 ANAPC15P60006 121 aa16.12■□□□□ 0.17
NFIX-201ENST00000358552 LRRFIP1Q32MZ4 808 aaKnown RBP16.12■□□□□ 0.17
NFIX-201ENST00000358552 KLHDC4Q8TBB5 520 aa16.12■□□□□ 0.17
NFIX-201ENST00000358552 RFX7Q2KHR2 1363 aa16.12■□□□□ 0.17
NFIX-201ENST00000358552 UBN2Q6ZU65 1347 aa16.12■□□□□ 0.17
NFIX-201ENST00000358552 ITGA6P23229 1130 aa16.11■□□□□ 0.17
NFIX-201ENST00000358552 RABEP1Q15276 862 aa16.11■□□□□ 0.17
NFIX-201ENST00000358552 SUSD4Q5VX71 490 aa16.11■□□□□ 0.17
NFIX-201ENST00000358552 CCDC8Q9H0W5 538 aaPredicted RBP16.11■□□□□ 0.17
NFIX-201ENST00000358552 TRAPPC3LQ5T215 181 aa16.11■□□□□ 0.17
NFIX-201ENST00000358552 KIAA1211Q6ZU35 1233 aa16.11■□□□□ 0.17
NFIX-201ENST00000358552 DIAPH3Q9NSV4 1193 aa16.11■□□□□ 0.17
NFIX-201ENST00000358552 RAD50Q92878 1312 aa16.1■□□□□ 0.17
NFIX-201ENST00000358552 TUBGCP6Q96RT7 1819 aa16.1■□□□□ 0.17
NFIX-201ENST00000358552 GSE1Q14687 1217 aa16.1■□□□□ 0.17
NFIX-201ENST00000358552 CCDC158Q5M9N0 1113 aa16.1■□□□□ 0.17
NFIX-201ENST00000358552 LDHAL6AQ6ZMR3 332 aa16.1■□□□□ 0.17
NFIX-201ENST00000358552 MROH5Q6ZUA9 1318 aa16.1■□□□□ 0.17
NFIX-201ENST00000358552 ABCC12Q96J65 1359 aa16.09■□□□□ 0.17
NFIX-201ENST00000358552 MYH3P11055 1940 aa16.09■□□□□ 0.17
NFIX-201ENST00000358552 GNPATO15228 680 aa16.09■□□□□ 0.17
NFIX-201ENST00000358552 NTSR2O95665 410 aa16.09■□□□□ 0.17
NFIX-201ENST00000358552 SLC10A5Q5PT55 438 aa16.09■□□□□ 0.17
NFIX-201ENST00000358552 TSHZ3Q63HK5 1081 aa16.09■□□□□ 0.17
NFIX-201ENST00000358552 HSCBQ8IWL3 235 aa16.09■□□□□ 0.17
NFIX-201ENST00000358552 SETDB2Q96T68 719 aa16.09■□□□□ 0.17
NFIX-201ENST00000358552 DBNLQ9UJU6 430 aaKnown RBP16.09■□□□□ 0.17
NFIX-201ENST00000358552 BCORQ6W2J9 1755 aa16.09■□□□□ 0.17
NFIX-201ENST00000358552 TPTE2Q6XPS3 522 aa16.08■□□□□ 0.17
NFIX-201ENST00000358552 CNNM1Q9NRU3 951 aa16.08■□□□□ 0.17
NFIX-201ENST00000358552 RIPOR2Q9Y4F9 1068 aa16.08■□□□□ 0.17
NFIX-201ENST00000358552 SGSM2O43147 1006 aa16.08■□□□□ 0.16
NFIX-201ENST00000358552 RFC4P35249 363 aa16.08■□□□□ 0.16
NFIX-201ENST00000358552 SF3B2Q13435 895 aaKnown RBP16.08■□□□□ 0.16
NFIX-201ENST00000358552 CDC5LQ99459 802 aaKnown RBP16.08■□□□□ 0.16
NFIX-201ENST00000358552 HAUS7Q99871 368 aa16.08■□□□□ 0.16
NFIX-201ENST00000358552 C4AP0C0L4 1744 aa16.07■□□□□ 0.16
NFIX-201ENST00000358552 GTF2E1P29083 439 aaPredicted RBP16.07■□□□□ 0.16
NFIX-201ENST00000358552 IGHMBP2P38935 993 aaKnown RBP16.07■□□□□ 0.16
NFIX-201ENST00000358552 SF3B3Q15393 1217 aaKnown RBP16.07■□□□□ 0.16
NFIX-201ENST00000358552 CCDC125Q86Z20 511 aa16.07■□□□□ 0.16
NFIX-201ENST00000358552 IL17RAQ96F46 866 aa16.07■□□□□ 0.16
NFIX-201ENST00000358552 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
NFIX-201ENST00000358552 NEUROD6Q96NK8 337 aa16.07■□□□□ 0.16
NFIX-201ENST00000358552 CAMKK2Q96RR4 588 aa16.07■□□□□ 0.16
NFIX-201ENST00000358552 MPHOSPH8Q99549 860 aa16.07■□□□□ 0.16
NFIX-201ENST00000358552 GREM2Q9H772 168 aa16.07■□□□□ 0.16
NFIX-201ENST00000358552 AK9Q5TCS8 1911 aa16.06■□□□□ 0.16
NFIX-201ENST00000358552 A0A1B0GUL7 405 aa16.06■□□□□ 0.16
NFIX-201ENST00000358552 SSFA2P28290 1259 aa16.06■□□□□ 0.16
NFIX-201ENST00000358552 LRRC24Q50LG9 513 aa16.06■□□□□ 0.16
NFIX-201ENST00000358552 METTL24Q5JXM2 366 aa16.06■□□□□ 0.16
NFIX-201ENST00000358552 BOLA2Q9H3K6 86 aa16.06■□□□□ 0.16
NFIX-201ENST00000358552 SNRKQ9NRH2 765 aa16.06■□□□□ 0.16
NFIX-201ENST00000358552 ST18O60284 1047 aa16.05■□□□□ 0.16
NFIX-201ENST00000358552 MCM2P49736 904 aa16.05■□□□□ 0.16
NFIX-201ENST00000358552 GORABQ5T7V8 394 aa16.05■□□□□ 0.16
NFIX-201ENST00000358552 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
NFIX-201ENST00000358552 ANO2Q9NQ90 1003 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms