RNA–Protein interactions for RNA: ENST00000357884.8

C19orf47-201, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 5

Gene C19orf47, Length 1,774 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-201ENST00000357884 HIP1O00291 1037 aa20.62■□□□□ 0.89
C19orf47-201ENST00000357884 GIGYF2Q6Y7W6 1299 aaKnown RBP20.62■□□□□ 0.89
C19orf47-201ENST00000357884 LSG1Q9H089 658 aaKnown RBP20.62■□□□□ 0.89
C19orf47-201ENST00000357884 CCDC87Q9NVE4 849 aa20.62■□□□□ 0.89
C19orf47-201ENST00000357884 KCNQ4P56696 695 aa20.62■□□□□ 0.89
C19orf47-201ENST00000357884 KIAA1211Q6ZU35 1233 aa20.62■□□□□ 0.89
C19orf47-201ENST00000357884 EVI5LQ96CN4 794 aa20.62■□□□□ 0.89
C19orf47-201ENST00000357884 LMBRD1Q9NUN5 540 aa20.62■□□□□ 0.89
C19orf47-201ENST00000357884 ZDHHC9Q9Y397 364 aa20.62■□□□□ 0.89
C19orf47-201ENST00000357884 ZNF330Q9Y3S2 320 aaPredicted RBP20.62■□□□□ 0.89
C19orf47-201ENST00000357884 DDX49Q9Y6V7 483 aaKnown RBP20.62■□□□□ 0.89
C19orf47-201ENST00000357884 BRD1O95696 1058 aa20.61■□□□□ 0.89
C19orf47-201ENST00000357884 IFIT2P09913 472 aaKnown RBP20.61■□□□□ 0.89
C19orf47-201ENST00000357884 KCNB2Q92953 911 aa20.61■□□□□ 0.89
C19orf47-201ENST00000357884 RREB1Q92766 1687 aa20.6■□□□□ 0.89
C19orf47-201ENST00000357884 ZNF445P59923 1031 aa20.6■□□□□ 0.89
C19orf47-201ENST00000357884 G3BP1Q13283 466 aaKnown RBP eCLIP20.6■□□□□ 0.89
C19orf47-201ENST00000357884 SNRKQ9NRH2 765 aa20.6■□□□□ 0.89
C19orf47-201ENST00000357884 CRKLP46109 303 aaKnown RBP20.59■□□□□ 0.89
C19orf47-201ENST00000357884 EIF5P55010 431 aaKnown RBP20.59■□□□□ 0.89
C19orf47-201ENST00000357884 EPHA10Q5JZY3 1008 aa20.59■□□□□ 0.89
C19orf47-201ENST00000357884 MCTP1Q6DN14 999 aa20.59■□□□□ 0.89
C19orf47-201ENST00000357884 INTS5Q6P9B9 1019 aaKnown RBP20.59■□□□□ 0.89
C19orf47-201ENST00000357884 TM6SF1Q9BZW5 370 aa20.59■□□□□ 0.89
C19orf47-201ENST00000357884 COPRSQ9NQ92 184 aa20.59■□□□□ 0.89
C19orf47-201ENST00000357884 CCNL1Q9UK58 526 aaPredicted RBP20.59■□□□□ 0.89
C19orf47-201ENST00000357884 IL25Q9H293 177 aa20.58■□□□□ 0.89
C19orf47-201ENST00000357884 DIAPH3Q9NSV4 1193 aa20.58■□□□□ 0.89
C19orf47-201ENST00000357884 ITPK1Q13572 414 aa20.57■□□□□ 0.88
C19orf47-201ENST00000357884 DZIP3Q86Y13 1208 aaKnown RBP20.57■□□□□ 0.88
C19orf47-201ENST00000357884 TTC14Q96N46 770 aa20.57■□□□□ 0.88
C19orf47-201ENST00000357884 SNX14Q9Y5W7 946 aa20.57■□□□□ 0.88
C19orf47-201ENST00000357884 PCCAP05165 728 aaPredicted RBP20.57■□□□□ 0.88
C19orf47-201ENST00000357884 SF3B2Q13435 895 aaKnown RBP20.57■□□□□ 0.88
C19orf47-201ENST00000357884 PKP1Q13835 747 aa20.57■□□□□ 0.88
C19orf47-201ENST00000357884 SASH1O94885 1247 aa20.56■□□□□ 0.88
C19orf47-201ENST00000357884 FOXO4P98177 505 aa20.56■□□□□ 0.88
C19orf47-201ENST00000357884 PLSCR1O15162 318 aa20.55■□□□□ 0.88
C19orf47-201ENST00000357884 RFX5P48382 616 aaPredicted RBP20.55■□□□□ 0.88
C19orf47-201ENST00000357884 AACSQ86V21 672 aa20.55■□□□□ 0.88
C19orf47-201ENST00000357884 ZBTB38Q8NAP3 1195 aaPredicted RBP20.55■□□□□ 0.88
C19orf47-201ENST00000357884 PLA2G12BQ9BX93 195 aa20.55■□□□□ 0.88
C19orf47-201ENST00000357884 PA2G4Q9UQ80 394 aaKnown RBP20.55■□□□□ 0.88
C19orf47-201ENST00000357884 MBD3O95983 291 aa20.54■□□□□ 0.88
C19orf47-201ENST00000357884 GAS2L3Q86XJ1 694 aa20.54■□□□□ 0.88
C19orf47-201ENST00000357884 TICAM2Q86XR7 235 aa20.54■□□□□ 0.88
C19orf47-201ENST00000357884 ARXQ96QS3 562 aa20.54■□□□□ 0.88
C19orf47-201ENST00000357884 CDHR2Q9BYE9 1310 aa20.54■□□□□ 0.88
C19orf47-201ENST00000357884 LMBR1LQ6UX01 489 aa20.54■□□□□ 0.88
C19orf47-201ENST00000357884 LY75O60449 1722 aa20.53■□□□□ 0.88
C19orf47-201ENST00000357884 RGL2O15211 777 aa20.53■□□□□ 0.88
C19orf47-201ENST00000357884 PDIA4P13667 645 aaKnown RBP20.53■□□□□ 0.88
C19orf47-201ENST00000357884 PTPN12Q05209 780 aaKnown RBP20.53■□□□□ 0.88
C19orf47-201ENST00000357884 HLFQ16534 295 aa20.53■□□□□ 0.88
C19orf47-201ENST00000357884 TXNRD1Q16881 649 aa20.53■□□□□ 0.88
C19orf47-201ENST00000357884 CWC27Q6UX04 472 aaKnown RBP20.53■□□□□ 0.88
C19orf47-201ENST00000357884 NLRP10Q86W26 655 aa20.53■□□□□ 0.88
C19orf47-201ENST00000357884 JARID2Q92833 1246 aaPredicted RBP20.53■□□□□ 0.88
C19orf47-201ENST00000357884 LRRC4BQ9NT99 713 aa20.53■□□□□ 0.88
C19orf47-201ENST00000357884 CNTNAP4Q9C0A0 1308 aa20.53■□□□□ 0.88
C19orf47-201ENST00000357884 WDR33Q9C0J8 1336 aaKnown RBP20.53■□□□□ 0.88
C19orf47-201ENST00000357884 RFX7Q2KHR2 1363 aa20.53■□□□□ 0.88
C19orf47-201ENST00000357884 COL5A3P25940 1745 aaPredicted RBP20.53■□□□□ 0.88
C19orf47-201ENST00000357884 MAP4K4O95819 1239 aaPredicted RBP20.52■□□□□ 0.88
C19orf47-201ENST00000357884 PROM2Q8N271 834 aa20.52■□□□□ 0.88
C19orf47-201ENST00000357884 LINC00116Q8NCU8 138 aa20.52■□□□□ 0.88
C19orf47-201ENST00000357884 EAF2Q96CJ1 260 aaPredicted RBP20.52■□□□□ 0.88
C19orf47-201ENST00000357884 PANK2Q9BZ23 570 aa20.52■□□□□ 0.88
C19orf47-201ENST00000357884 UPF3BQ9BZI7 483 aaKnown RBP20.52■□□□□ 0.88
C19orf47-201ENST00000357884 LIMCH1Q9UPQ0 1083 aa20.52■□□□□ 0.88
C19orf47-201ENST00000357884 TNS1Q9HBL0 1735 aaKnown RBP20.52■□□□□ 0.88
C19orf47-201ENST00000357884 EN1Q05925 392 aaPredicted RBP20.51■□□□□ 0.87
C19orf47-201ENST00000357884 KLHL34Q8N239 644 aa20.51■□□□□ 0.87
C19orf47-201ENST00000357884 SLC27A3Q5K4L6 730 aa20.51■□□□□ 0.87
C19orf47-201ENST00000357884 RC3H1Q5TC82 1133 aaKnown RBP20.51■□□□□ 0.87
C19orf47-201ENST00000357884 VPS53Q5VIR6 699 aa20.51■□□□□ 0.87
C19orf47-201ENST00000357884 ZNF34Q8IZ26 560 aa20.51■□□□□ 0.87
C19orf47-201ENST00000357884 ZSCAN31Q96LW9 406 aaPredicted RBP20.51■□□□□ 0.87
C19orf47-201ENST00000357884 TBC1D2BQ9UPU7 963 aa20.51■□□□□ 0.87
C19orf47-201ENST00000357884 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.51■□□□□ 0.87
C19orf47-201ENST00000357884 ANKRD36CQ5JPF3 1778 aa20.5■□□□□ 0.87
C19orf47-201ENST00000357884 ZSWIM6Q9HCJ5 1215 aa20.5■□□□□ 0.87
C19orf47-201ENST00000357884 CCDC171Q6TFL3 1326 aa20.49■□□□□ 0.87
C19orf47-201ENST00000357884 PRPF40AO75400 957 aaKnown RBP20.49■□□□□ 0.87
C19orf47-201ENST00000357884 BAG6P46379 1132 aa20.49■□□□□ 0.87
C19orf47-201ENST00000357884 NECTIN1Q15223 517 aa20.49■□□□□ 0.87
C19orf47-201ENST00000357884 RTN4Q9NQC3 1192 aaKnown RBP20.49■□□□□ 0.87
C19orf47-201ENST00000357884 SH2B1Q9NRF2 756 aaPredicted RBP20.49■□□□□ 0.87
C19orf47-201ENST00000357884 FBXO3Q9UK99 471 aa20.49■□□□□ 0.87
C19orf47-201ENST00000357884 CAMTA2O94983 1202 aa20.49■□□□□ 0.87
C19orf47-201ENST00000357884 EZH2Q15910 746 aaKnown RBP20.49■□□□□ 0.87
C19orf47-201ENST00000357884 PARP10Q53GL7 1025 aa20.49■□□□□ 0.87
C19orf47-201ENST00000357884 DEFB132Q7Z7B7 95 aa20.49■□□□□ 0.87
C19orf47-201ENST00000357884 RASEFQ8IZ41 740 aa20.49■□□□□ 0.87
C19orf47-201ENST00000357884 MAP4K1Q92918 833 aa20.49■□□□□ 0.87
C19orf47-201ENST00000357884 AK7Q96M32 723 aa20.49■□□□□ 0.87
C19orf47-201ENST00000357884 ZKSCAN1P17029 563 aaPredicted RBP20.48■□□□□ 0.87
C19orf47-201ENST00000357884 ZSCAN23Q3MJ62 389 aa20.48■□□□□ 0.87
C19orf47-201ENST00000357884 CCDC125Q86Z20 511 aa20.48■□□□□ 0.87
C19orf47-201ENST00000357884 SIL1Q9H173 461 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms