RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 ELF2Q15723 593 aa13.18□□□□□ -0.3
PSEN1-202ENST00000357710 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
PSEN1-202ENST00000357710 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
PSEN1-202ENST00000357710 TRIM74Q86UV6 250 aa13.18□□□□□ -0.3
PSEN1-202ENST00000357710 TRIM73Q86UV7 250 aa13.18□□□□□ -0.3
PSEN1-202ENST00000357710 DCCP43146 1447 aa13.18□□□□□ -0.3
PSEN1-202ENST00000357710 ZNF521Q96K83 1311 aa13.18□□□□□ -0.3
PSEN1-202ENST00000357710 POLD1P28340 1107 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 ST5P78524 1137 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 TBC1D8BQ0IIM8 1120 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 CDC37Q16543 378 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-202ENST00000357710 TMCO3Q6UWJ1 677 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 DRAXINQ8NBI3 349 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-202ENST00000357710 DDX11Q96FC9 970 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 GGNBP2Q9H3C7 697 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 SENP3-EIF4A1A0A087X0R7 540 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 MYBL2P10244 700 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 RPS6KA3P51812 740 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 SDR16C5Q8N3Y7 309 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 RBM33Q96EV2 1170 aaKnown RBP13.17□□□□□ -0.3
PSEN1-202ENST00000357710 MMTAG2Q9BU76 263 aaKnown RBP13.17□□□□□ -0.3
PSEN1-202ENST00000357710 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 MCM8Q9UJA3 840 aa13.17□□□□□ -0.3
PSEN1-202ENST00000357710 ZNF215Q9UL58 517 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-202ENST00000357710 SOS1Q07889 1333 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-202ENST00000357710 SNUPNO95149 360 aaKnown RBP13.16□□□□□ -0.3
PSEN1-202ENST00000357710 SF3A1Q15459 793 aaKnown RBP13.16□□□□□ -0.3
PSEN1-202ENST00000357710 RPUSD2Q8IZ73 545 aaKnown RBP13.16□□□□□ -0.3
PSEN1-202ENST00000357710 PIK3R5Q8WYR1 880 aa13.16□□□□□ -0.3
PSEN1-202ENST00000357710 TMEM94Q12767 1356 aa13.16□□□□□ -0.3
PSEN1-202ENST00000357710 MRPL12P52815 198 aaKnown RBP13.16□□□□□ -0.3
PSEN1-202ENST00000357710 NAA30Q147X3 362 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-202ENST00000357710 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
PSEN1-202ENST00000357710 NGDNQ8NEJ9 315 aaKnown RBP13.16□□□□□ -0.3
PSEN1-202ENST00000357710 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
PSEN1-202ENST00000357710 ZNF483Q8TF39 744 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-202ENST00000357710 RTF1Q92541 710 aaKnown RBP13.16□□□□□ -0.3
PSEN1-202ENST00000357710 U2SURPO15042 1029 aaKnown RBP13.15□□□□□ -0.3
PSEN1-202ENST00000357710 IMPDH2P12268 514 aa13.15□□□□□ -0.3
PSEN1-202ENST00000357710 DDR1Q08345 913 aa13.15□□□□□ -0.3
PSEN1-202ENST00000357710 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
PSEN1-202ENST00000357710 KIF1AQ12756 1690 aa13.15□□□□□ -0.3
PSEN1-202ENST00000357710 RDXP35241 583 aaKnown RBP13.15□□□□□ -0.3
PSEN1-202ENST00000357710 CLCN6P51797 869 aa13.15□□□□□ -0.3
PSEN1-202ENST00000357710 REXO1L1PQ8IX06 675 aa13.15□□□□□ -0.3
PSEN1-202ENST00000357710 TRMT2AQ8IZ69 625 aaKnown RBP13.15□□□□□ -0.3
PSEN1-202ENST00000357710 RANBP17Q9H2T7 1088 aaKnown RBP13.15□□□□□ -0.3
PSEN1-202ENST00000357710 POLR3GO15318 223 aaPredicted RBP13.15□□□□□ -0.31
PSEN1-202ENST00000357710 OAS2P29728 719 aaKnown RBP13.15□□□□□ -0.31
PSEN1-202ENST00000357710 C16orf45Q96MC5 204 aaPredicted RBP13.15□□□□□ -0.31
PSEN1-202ENST00000357710 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.31
PSEN1-202ENST00000357710 PES1O00541 588 aaKnown RBP13.14□□□□□ -0.31
PSEN1-202ENST00000357710 NF2P35240 595 aa13.14□□□□□ -0.31
PSEN1-202ENST00000357710 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
PSEN1-202ENST00000357710 ANKRD18AQ8IVF6 992 aa13.14□□□□□ -0.31
PSEN1-202ENST00000357710 RBM12BQ8IXT5 1001 aaKnown RBP13.14□□□□□ -0.31
PSEN1-202ENST00000357710 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-202ENST00000357710 C19orf44Q9H6X5 657 aa13.14□□□□□ -0.31
PSEN1-202ENST00000357710 TTC21BQ7Z4L5 1316 aa13.14□□□□□ -0.31
PSEN1-202ENST00000357710 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
PSEN1-202ENST00000357710 TUBB4AP04350 444 aa13.14□□□□□ -0.31
PSEN1-202ENST00000357710 CHMLP26374 656 aa13.14□□□□□ -0.31
PSEN1-202ENST00000357710 CFAP53Q96M91 514 aa13.14□□□□□ -0.31
PSEN1-202ENST00000357710 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
PSEN1-202ENST00000357710 NME9Q86XW9 330 aa13.13□□□□□ -0.31
PSEN1-202ENST00000357710 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
PSEN1-202ENST00000357710 AK9Q5TCS8 1911 aa13.13□□□□□ -0.31
PSEN1-202ENST00000357710 CDKL5O76039 1030 aa13.13□□□□□ -0.31
PSEN1-202ENST00000357710 LMAN1P49257 510 aa13.13□□□□□ -0.31
PSEN1-202ENST00000357710 COG3Q96JB2 828 aa13.13□□□□□ -0.31
PSEN1-202ENST00000357710 PCDHGA4Q9Y5G9 962 aa13.13□□□□□ -0.31
PSEN1-202ENST00000357710 SHPRHQ149N8 1683 aa13.13□□□□□ -0.31
PSEN1-202ENST00000357710 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
PSEN1-202ENST00000357710 A0A1B0GUA9 196 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 FAM163BP0C2L3 166 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 ERBB3P21860 1342 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 MSH6P52701 1360 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 CRACR2AQ9BSW2 395 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 IFT57Q9NWB7 429 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 OVOS2A0A0J9YW53 1432 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 OVOS2Q6IE36 1432 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 GOLGA6CA6NDK9 693 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 GOLGA6BA6NDN3 693 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 GOLGA6DP0CG33 693 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 HNRNPH1P31943 449 aaKnown RBP13.12□□□□□ -0.31
PSEN1-202ENST00000357710 PDIA5Q14554 519 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 TPD52L1Q16890 204 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-202ENST00000357710 TCP11Q8WWU5 503 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 SLC24A3Q9HC58 644 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 GOLGA6AQ9NYA3 693 aa13.12□□□□□ -0.31
PSEN1-202ENST00000357710 ERLIN2O94905 339 aa13.11□□□□□ -0.31
PSEN1-202ENST00000357710 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-202ENST00000357710 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
PSEN1-202ENST00000357710 PIK3C2AO00443 1686 aa13.11□□□□□ -0.31
PSEN1-202ENST00000357710 USP54Q70EL1 1684 aa13.11□□□□□ -0.31
PSEN1-202ENST00000357710 LRRC7Q96NW7 1537 aa13.11□□□□□ -0.31
PSEN1-202ENST00000357710 C1orf167Q5SNV9 1468 aa13.11□□□□□ -0.31
PSEN1-202ENST00000357710 NEMFO60524 1076 aa13.11□□□□□ -0.31
PSEN1-202ENST00000357710 PECAM1P16284 738 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms