RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 PDE8AO60658 829 aa17.32■□□□□ 0.36
SHANK2-202ENST00000357171 CT47B1P0C2W7 299 aaPredicted RBP17.32■□□□□ 0.36
SHANK2-202ENST00000357171 GCKRQ14397 625 aa17.32■□□□□ 0.36
SHANK2-202ENST00000357171 SLC51AQ86UW1 340 aa17.32■□□□□ 0.36
SHANK2-202ENST00000357171 MRPL50Q8N5N7 158 aaKnown RBP17.32■□□□□ 0.36
SHANK2-202ENST00000357171 LTBP1Q14766 1721 aa17.32■□□□□ 0.36
SHANK2-202ENST00000357171 CASP7P55210 303 aa17.31■□□□□ 0.36
SHANK2-202ENST00000357171 ALDH1L2Q3SY69 923 aa17.31■□□□□ 0.36
SHANK2-202ENST00000357171 BEND3Q5T5X7 828 aa17.31■□□□□ 0.36
SHANK2-202ENST00000357171 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
SHANK2-202ENST00000357171 SP8Q8IXZ3 490 aa17.31■□□□□ 0.36
SHANK2-202ENST00000357171 F6X3S4 739 aa17.3■□□□□ 0.36
SHANK2-202ENST00000357171 KIF3CO14782 793 aa17.3■□□□□ 0.36
SHANK2-202ENST00000357171 ZNF526Q8TF50 670 aaPredicted RBP17.3■□□□□ 0.36
SHANK2-202ENST00000357171 SSH1Q8WYL5 1049 aa17.3■□□□□ 0.36
SHANK2-202ENST00000357171 WDR90Q96KV7 1748 aa17.3■□□□□ 0.36
SHANK2-202ENST00000357171 DUOX1Q9NRD9 1551 aa17.3■□□□□ 0.36
SHANK2-202ENST00000357171 GLTPD2A6NH11 291 aa17.29■□□□□ 0.36
SHANK2-202ENST00000357171 JARID2Q92833 1246 aaPredicted RBP17.29■□□□□ 0.36
SHANK2-202ENST00000357171 CELF1Q92879 486 aaKnown RBP17.29■□□□□ 0.36
SHANK2-202ENST00000357171 PLA2G12BQ9BX93 195 aa17.29■□□□□ 0.36
SHANK2-202ENST00000357171 RTFDC1Q9BY42 306 aaPredicted RBP17.29■□□□□ 0.36
SHANK2-202ENST00000357171 COL4A5P29400 1685 aa17.29■□□□□ 0.36
SHANK2-202ENST00000357171 IARSP41252 1262 aaKnown RBP17.28■□□□□ 0.36
SHANK2-202ENST00000357171 BRPF1P55201 1214 aaPredicted RBP17.28■□□□□ 0.36
SHANK2-202ENST00000357171 ZNF277Q9NRM2 450 aaPredicted RBP17.28■□□□□ 0.36
SHANK2-202ENST00000357171 PTPRCP08575 1304 aa17.28■□□□□ 0.36
SHANK2-202ENST00000357171 KDM2BQ8NHM5 1336 aa17.28■□□□□ 0.36
SHANK2-202ENST00000357171 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
SHANK2-202ENST00000357171 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
SHANK2-202ENST00000357171 TTLL11Q8NHH1 800 aa17.28■□□□□ 0.36
SHANK2-202ENST00000357171 VPS33BQ9H267 617 aa17.28■□□□□ 0.36
SHANK2-202ENST00000357171 CEP350Q5VT06 3117 aa17.27■□□□□ 0.36
SHANK2-202ENST00000357171 CTSWP56202 376 aa17.27■□□□□ 0.35
SHANK2-202ENST00000357171 RPS8P62241 208 aaKnown RBP17.27■□□□□ 0.35
SHANK2-202ENST00000357171 UBE3BQ7Z3V4 1068 aa17.27■□□□□ 0.35
SHANK2-202ENST00000357171 NMRK2Q9NPI5 230 aa17.27■□□□□ 0.35
SHANK2-202ENST00000357171 SEC31BQ9NQW1 1179 aa17.27■□□□□ 0.35
SHANK2-202ENST00000357171 FZD9O00144 591 aa17.26■□□□□ 0.35
SHANK2-202ENST00000357171 ALDH1L1O75891 902 aa17.26■□□□□ 0.35
SHANK2-202ENST00000357171 SCN4AP35499 1836 aa17.25■□□□□ 0.35
SHANK2-202ENST00000357171 SPEF2Q9C093 1822 aa17.25■□□□□ 0.35
SHANK2-202ENST00000357171 CSF1RP07333 972 aa17.25■□□□□ 0.35
SHANK2-202ENST00000357171 C1QTNF8P60827 252 aa17.25■□□□□ 0.35
SHANK2-202ENST00000357171 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.35
SHANK2-202ENST00000357171 TMX4Q9H1E5 349 aaPredicted RBP17.25■□□□□ 0.35
SHANK2-202ENST00000357171 POTECB2RU33 542 aa17.24■□□□□ 0.35
SHANK2-202ENST00000357171 DPY19L2Q6NUT2 758 aa17.24■□□□□ 0.35
SHANK2-202ENST00000357171 MPNDQ8N594 471 aa17.24■□□□□ 0.35
SHANK2-202ENST00000357171 UTYO14607 1347 aa17.23■□□□□ 0.35
SHANK2-202ENST00000357171 ZBED9Q6R2W3 1325 aa17.23■□□□□ 0.35
SHANK2-202ENST00000357171 GRM8O00222 908 aa17.23■□□□□ 0.35
SHANK2-202ENST00000357171 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
SHANK2-202ENST00000357171 SUPT20HQ8NEM7 779 aa17.23■□□□□ 0.35
SHANK2-202ENST00000357171 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
SHANK2-202ENST00000357171 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
SHANK2-202ENST00000357171 GREM2Q9H772 168 aa17.23■□□□□ 0.35
SHANK2-202ENST00000357171 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
SHANK2-202ENST00000357171 FOXO4P98177 505 aa17.22■□□□□ 0.35
SHANK2-202ENST00000357171 RRAGCQ9HB90 399 aa17.22■□□□□ 0.35
SHANK2-202ENST00000357171 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
SHANK2-202ENST00000357171 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
SHANK2-202ENST00000357171 TOMM70O94826 608 aa17.21■□□□□ 0.35
SHANK2-202ENST00000357171 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.35
SHANK2-202ENST00000357171 SLC4A10Q6U841 1118 aa17.21■□□□□ 0.35
SHANK2-202ENST00000357171 JDP2Q8WYK2 163 aa17.21■□□□□ 0.35
SHANK2-202ENST00000357171 L3MBTL3Q96JM7 780 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-202ENST00000357171 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
SHANK2-202ENST00000357171 DDNO94850 711 aaPredicted RBP17.2■□□□□ 0.34
SHANK2-202ENST00000357171 VEGFAP15692 232 aaPredicted RBP17.2■□□□□ 0.34
SHANK2-202ENST00000357171 CCDC85AQ96PX6 553 aaPredicted RBP17.2■□□□□ 0.34
SHANK2-202ENST00000357171 CDC5LQ99459 802 aaKnown RBP17.2■□□□□ 0.34
SHANK2-202ENST00000357171 A0A1B0GUL6 1792 aa17.2■□□□□ 0.34
SHANK2-202ENST00000357171 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
SHANK2-202ENST00000357171 GPSM2P81274 684 aa17.19■□□□□ 0.34
SHANK2-202ENST00000357171 AOC3Q16853 763 aa17.19■□□□□ 0.34
SHANK2-202ENST00000357171 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
SHANK2-202ENST00000357171 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
SHANK2-202ENST00000357171 KAZALD1Q96I82 304 aa17.19■□□□□ 0.34
SHANK2-202ENST00000357171 BSDC1Q9NW68 430 aaPredicted RBP17.19■□□□□ 0.34
SHANK2-202ENST00000357171 POLLQ9UGP5 575 aa17.19■□□□□ 0.34
SHANK2-202ENST00000357171 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
SHANK2-202ENST00000357171 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
SHANK2-202ENST00000357171 GPC2Q8N158 579 aa17.18■□□□□ 0.34
SHANK2-202ENST00000357171 PSME4Q14997 1843 aa17.17■□□□□ 0.34
SHANK2-202ENST00000357171 NBPF7P0C2Y1 421 aaPredicted RBP17.17■□□□□ 0.34
SHANK2-202ENST00000357171 ITGA6P23229 1130 aa17.17■□□□□ 0.34
SHANK2-202ENST00000357171 EPHA10Q5JZY3 1008 aa17.17■□□□□ 0.34
SHANK2-202ENST00000357171 TBC1D16Q8TBP0 767 aa17.17■□□□□ 0.34
SHANK2-202ENST00000357171 RBM46Q8TBY0 533 aaKnown RBP17.17■□□□□ 0.34
SHANK2-202ENST00000357171 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
SHANK2-202ENST00000357171 C9orf78Q9NZ63 289 aaPredicted RBP17.17■□□□□ 0.34
SHANK2-202ENST00000357171 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
SHANK2-202ENST00000357171 NIM1KQ8IY84 436 aa17.16■□□□□ 0.34
SHANK2-202ENST00000357171 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
SHANK2-202ENST00000357171 ZNRF3Q9ULT6 936 aa17.16■□□□□ 0.34
SHANK2-202ENST00000357171 MINPP1Q9UNW1 487 aa17.16■□□□□ 0.34
SHANK2-202ENST00000357171 SCN9AQ15858 1988 aa17.16■□□□□ 0.34
SHANK2-202ENST00000357171 ADAMTSL1Q8N6G6 1762 aa17.16■□□□□ 0.34
SHANK2-202ENST00000357171 XDHP47989 1333 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms