RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 IFIT5Q13325 482 aaKnown RBP16.76■□□□□ 0.27
HOXA1-202ENST00000355633 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
HOXA1-202ENST00000355633 COL24A1Q17RW2 1714 aa16.76■□□□□ 0.27
HOXA1-202ENST00000355633 HCLS1P14317 486 aaPredicted RBP16.75■□□□□ 0.27
HOXA1-202ENST00000355633 STAP2Q9UGK3 403 aa16.75■□□□□ 0.27
HOXA1-202ENST00000355633 TAF7LQ5H9L4 462 aa16.75■□□□□ 0.27
HOXA1-202ENST00000355633 ZNF594Q96JF6 807 aaPredicted RBP16.75■□□□□ 0.27
HOXA1-202ENST00000355633 GREM2Q9H772 168 aa16.75■□□□□ 0.27
HOXA1-202ENST00000355633 ITGA6P23229 1130 aa16.74■□□□□ 0.27
HOXA1-202ENST00000355633 NYXQ9GZU5 481 aa16.74■□□□□ 0.27
HOXA1-202ENST00000355633 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.74■□□□□ 0.27
HOXA1-202ENST00000355633 AOX1Q06278 1338 aa16.74■□□□□ 0.27
HOXA1-202ENST00000355633 ANKRD18BA2A2Z9 1011 aa16.74■□□□□ 0.27
HOXA1-202ENST00000355633 EYA2O00167 538 aa16.74■□□□□ 0.27
HOXA1-202ENST00000355633 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
HOXA1-202ENST00000355633 TSHZ3Q63HK5 1081 aa16.74■□□□□ 0.27
HOXA1-202ENST00000355633 AACSQ86V21 672 aa16.74■□□□□ 0.27
HOXA1-202ENST00000355633 CIAO1O76071 339 aa16.73■□□□□ 0.27
HOXA1-202ENST00000355633 GTF2E1P29083 439 aaPredicted RBP16.73■□□□□ 0.27
HOXA1-202ENST00000355633 IL15P40933 162 aaPredicted RBP16.73■□□□□ 0.27
HOXA1-202ENST00000355633 TFCP2Q12800 502 aa16.73■□□□□ 0.27
HOXA1-202ENST00000355633 ERFEQ4G0M1 354 aa16.73■□□□□ 0.27
HOXA1-202ENST00000355633 ATG9AQ7Z3C6 839 aa16.73■□□□□ 0.27
HOXA1-202ENST00000355633 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
HOXA1-202ENST00000355633 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
HOXA1-202ENST00000355633 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
HOXA1-202ENST00000355633 EAF2Q96CJ1 260 aaPredicted RBP16.72■□□□□ 0.27
HOXA1-202ENST00000355633 TFCP2L1Q9NZI6 479 aa16.72■□□□□ 0.27
HOXA1-202ENST00000355633 LRRC24Q50LG9 513 aa16.72■□□□□ 0.27
HOXA1-202ENST00000355633 NBPF5PQ86XG9 351 aaPredicted RBP16.72■□□□□ 0.27
HOXA1-202ENST00000355633 GPATCH3Q96I76 525 aa16.72■□□□□ 0.27
HOXA1-202ENST00000355633 GYS1P13807 737 aa16.71■□□□□ 0.27
HOXA1-202ENST00000355633 PUS3Q9BZE2 481 aaKnown RBP16.71■□□□□ 0.27
HOXA1-202ENST00000355633 TTC41PQ6P2S7 1318 aa16.71■□□□□ 0.27
HOXA1-202ENST00000355633 TUBGCP6Q96RT7 1819 aa16.71■□□□□ 0.27
HOXA1-202ENST00000355633 NFIXQ14938 502 aa16.7■□□□□ 0.26
HOXA1-202ENST00000355633 CCDC152Q4G0S7 254 aa16.7■□□□□ 0.26
HOXA1-202ENST00000355633 TNNI3KQ59H18 835 aa16.7■□□□□ 0.26
HOXA1-202ENST00000355633 TPTE2Q6XPS3 522 aa16.7■□□□□ 0.26
HOXA1-202ENST00000355633 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
HOXA1-202ENST00000355633 FPGT-TNNI3KV9GXZ4 949 aa16.7■□□□□ 0.26
HOXA1-202ENST00000355633 CARMIL3Q8ND23 1372 aa16.7■□□□□ 0.26
HOXA1-202ENST00000355633 SDSP20132 328 aa16.7■□□□□ 0.26
HOXA1-202ENST00000355633 PI4K2BQ8TCG2 481 aa16.7■□□□□ 0.26
HOXA1-202ENST00000355633 RTL9Q8NET4 1388 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 ABCC12Q96J65 1359 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 CDC45O75419 566 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 EN1Q05925 392 aaPredicted RBP16.69■□□□□ 0.26
HOXA1-202ENST00000355633 SLC10A5Q5PT55 438 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 LDHAL6AQ6ZMR3 332 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 ECHDC1Q9NTX5 307 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 CASZ1Q86V15 1759 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 ERC2O15083 957 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 SEC24BO95487 1268 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 SF3B2Q13435 895 aaKnown RBP16.69■□□□□ 0.26
HOXA1-202ENST00000355633 EZH2Q15910 746 aaKnown RBP16.69■□□□□ 0.26
HOXA1-202ENST00000355633 FLAD1Q8NFF5 587 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 CAMKK2Q96RR4 588 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 GPR108Q9NPR9 543 aa16.69■□□□□ 0.26
HOXA1-202ENST00000355633 NPHP1O15259 732 aa16.68■□□□□ 0.26
HOXA1-202ENST00000355633 GLRX3O76003 335 aaKnown RBP16.68■□□□□ 0.26
HOXA1-202ENST00000355633 CNNM1Q9NRU3 951 aa16.68■□□□□ 0.26
HOXA1-202ENST00000355633 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
HOXA1-202ENST00000355633 CEP126Q9P2H0 1117 aa16.68■□□□□ 0.26
HOXA1-202ENST00000355633 LRP5O75197 1615 aa16.68■□□□□ 0.26
HOXA1-202ENST00000355633 SF3B3Q15393 1217 aaKnown RBP16.67■□□□□ 0.26
HOXA1-202ENST00000355633 TRIM6-TRIM34B2RNG4 842 aa16.67■□□□□ 0.26
HOXA1-202ENST00000355633 TBC1D9Q6ZT07 1266 aa16.67■□□□□ 0.26
HOXA1-202ENST00000355633 ILDR1Q86SU0 546 aaPredicted RBP16.67■□□□□ 0.26
HOXA1-202ENST00000355633 COL23A1Q86Y22 540 aaPredicted RBP16.67■□□□□ 0.26
HOXA1-202ENST00000355633 RIPOR2Q9Y4F9 1068 aa16.67■□□□□ 0.26
HOXA1-202ENST00000355633 MSH5O43196 834 aa16.66■□□□□ 0.26
HOXA1-202ENST00000355633 BAG6P46379 1132 aa16.66■□□□□ 0.26
HOXA1-202ENST00000355633 RILPL2Q969X0 211 aa16.66■□□□□ 0.26
HOXA1-202ENST00000355633 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
HOXA1-202ENST00000355633 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
HOXA1-202ENST00000355633 DBNLQ9UJU6 430 aaKnown RBP16.66■□□□□ 0.26
HOXA1-202ENST00000355633 ZNF609O15014 1411 aa16.66■□□□□ 0.26
HOXA1-202ENST00000355633 METTL24Q5JXM2 366 aa16.65■□□□□ 0.26
HOXA1-202ENST00000355633 C3orf67Q6ZVT6 689 aa16.65■□□□□ 0.26
HOXA1-202ENST00000355633 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
HOXA1-202ENST00000355633 UPF2Q9HAU5 1272 aaKnown RBP16.65■□□□□ 0.26
HOXA1-202ENST00000355633 RIC1Q4ADV7 1423 aa16.65■□□□□ 0.26
HOXA1-202ENST00000355633 TM4SF1P30408 202 aa16.65■□□□□ 0.26
HOXA1-202ENST00000355633 CCDC24Q8N4L8 307 aa16.65■□□□□ 0.26
HOXA1-202ENST00000355633 NEUROD6Q96NK8 337 aa16.65■□□□□ 0.26
HOXA1-202ENST00000355633 MPHOSPH8Q99549 860 aa16.65■□□□□ 0.26
HOXA1-202ENST00000355633 DBNDD2Q9BQY9 259 aa16.65■□□□□ 0.26
HOXA1-202ENST00000355633 AKAP2Q9Y2D5 859 aa16.65■□□□□ 0.26
HOXA1-202ENST00000355633 AK9Q5TCS8 1911 aa16.64■□□□□ 0.25
HOXA1-202ENST00000355633 A0A1B0GUL7 405 aa16.64■□□□□ 0.25
HOXA1-202ENST00000355633 IGHMBP2P38935 993 aaKnown RBP16.64■□□□□ 0.25
HOXA1-202ENST00000355633 CASC1Q6TDU7 716 aa16.64■□□□□ 0.25
HOXA1-202ENST00000355633 CDC5LQ99459 802 aaKnown RBP16.64■□□□□ 0.25
HOXA1-202ENST00000355633 SPEF2Q9C093 1822 aa16.64■□□□□ 0.25
HOXA1-202ENST00000355633 PNPLA7Q6ZV29 1317 aa16.64■□□□□ 0.25
HOXA1-202ENST00000355633 SERPINB2P05120 415 aa16.63■□□□□ 0.25
HOXA1-202ENST00000355633 MFAP1P55081 439 aaKnown RBP16.63■□□□□ 0.25
HOXA1-202ENST00000355633 TIMM10P62072 90 aa16.63■□□□□ 0.25
HOXA1-202ENST00000355633 CNTROBQ8N137 903 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms