RNA–Protein interactions for RNA: ENST00000355612.6

KRT39-201, Transcript of keratin 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT39, Length 1,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-201ENST00000355612 PCDHB13Q9Y5F0 798 aa7.92□□□□□ -1.14
KRT39-201ENST00000355612 NUP98P52948 1817 aa7.92□□□□□ -1.14
KRT39-201ENST00000355612 SGSM2O43147 1006 aa7.92□□□□□ -1.14
KRT39-201ENST00000355612 DDIT3P35638 169 aa7.92□□□□□ -1.14
KRT39-201ENST00000355612 RFX5P48382 616 aaPredicted RBP7.92□□□□□ -1.14
KRT39-201ENST00000355612 CASP7P55210 303 aa7.92□□□□□ -1.14
KRT39-201ENST00000355612 EAF2Q96CJ1 260 aaPredicted RBP7.92□□□□□ -1.14
KRT39-201ENST00000355612 GBP4Q96PP9 640 aa7.92□□□□□ -1.14
KRT39-201ENST00000355612 ATG3Q9NT62 314 aa7.92□□□□□ -1.14
KRT39-201ENST00000355612 ASAP1Q9ULH1 1129 aa7.92□□□□□ -1.14
KRT39-201ENST00000355612 CHMP3Q9Y3E7 222 aa7.92□□□□□ -1.14
KRT39-201ENST00000355612 ZNF330Q9Y3S2 320 aaPredicted RBP7.92□□□□□ -1.14
KRT39-201ENST00000355612 RAD50Q92878 1312 aa7.91□□□□□ -1.14
KRT39-201ENST00000355612 DDX11L8A8MPP1 907 aa7.91□□□□□ -1.14
KRT39-201ENST00000355612 TOM1O60784 492 aa7.91□□□□□ -1.14
KRT39-201ENST00000355612 ADAMTS2O95450 1211 aa7.91□□□□□ -1.14
KRT39-201ENST00000355612 NEK4P51957 841 aa7.91□□□□□ -1.14
KRT39-201ENST00000355612 PTPN12Q05209 780 aaKnown RBP7.91□□□□□ -1.14
KRT39-201ENST00000355612 MKRN3Q13064 507 aaKnown RBP7.91□□□□□ -1.14
KRT39-201ENST00000355612 LMBR1LQ6UX01 489 aa7.91□□□□□ -1.14
KRT39-201ENST00000355612 DNAJC10Q8IXB1 793 aa7.91□□□□□ -1.14
KRT39-201ENST00000355612 FBXO22Q8NEZ5 403 aa7.91□□□□□ -1.14
KRT39-201ENST00000355612 KLHDC4Q8TBB5 520 aa7.91□□□□□ -1.14
KRT39-201ENST00000355612 JARID2Q92833 1246 aaPredicted RBP7.91□□□□□ -1.14
KRT39-201ENST00000355612 SYTL4Q96C24 671 aaPredicted RBP7.91□□□□□ -1.14
KRT39-201ENST00000355612 IL17RAQ96F46 866 aa7.91□□□□□ -1.14
KRT39-201ENST00000355612 CCDC8Q9H0W5 538 aaPredicted RBP7.91□□□□□ -1.14
KRT39-201ENST00000355612 CICQ96RK0 1608 aaPredicted RBP7.91□□□□□ -1.14
KRT39-201ENST00000355612 SPATA31A1Q5TZJ5 1347 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 PTMSP20962 102 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 MCM4P33991 863 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 HSPA4P34932 840 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 FOXO4P98177 505 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 TCIRG1Q13488 830 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 RAB3GAP1Q15042 981 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 DDB1Q16531 1140 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 HSP90AB3PQ58FF7 597 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 TNNI3KQ59H18 835 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 CWC27Q6UX04 472 aaKnown RBP7.9□□□□□ -1.14
KRT39-201ENST00000355612 ISCA1Q9BUE6 129 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 CWC22Q9HCG8 908 aaKnown RBP7.9□□□□□ -1.14
KRT39-201ENST00000355612 FPGT-TNNI3KV9GXZ4 949 aa7.9□□□□□ -1.14
KRT39-201ENST00000355612 SPEF2Q9C093 1822 aa7.9□□□□□ -1.15
KRT39-201ENST00000355612 IL15P40933 162 aaPredicted RBP7.89□□□□□ -1.15
KRT39-201ENST00000355612 NUCB2P80303 420 aa7.89□□□□□ -1.15
KRT39-201ENST00000355612 TFCP2Q12800 502 aa7.89□□□□□ -1.15
KRT39-201ENST00000355612 TRIM28Q13263 835 aaKnown RBP7.89□□□□□ -1.15
KRT39-201ENST00000355612 RBM26Q5T8P6 1007 aaKnown RBP7.89□□□□□ -1.15
KRT39-201ENST00000355612 FSD1Q9BTV5 496 aa7.89□□□□□ -1.15
KRT39-201ENST00000355612 TLR7Q9NYK1 1049 aaKnown RBP7.89□□□□□ -1.15
KRT39-201ENST00000355612 RREB1Q92766 1687 aa7.89□□□□□ -1.15
KRT39-201ENST00000355612 RFX7Q2KHR2 1363 aa7.89□□□□□ -1.15
KRT39-201ENST00000355612 MAP3K15Q6ZN16 1313 aa7.89□□□□□ -1.15
KRT39-201ENST00000355612 ATP5JP18859 108 aa7.89□□□□□ -1.15
KRT39-201ENST00000355612 PIP4K2BP78356 416 aa7.89□□□□□ -1.15
KRT39-201ENST00000355612 KRI1Q8N9T8 703 aaKnown RBP7.89□□□□□ -1.15
KRT39-201ENST00000355612 TNPO1Q92973 898 aaKnown RBP7.89□□□□□ -1.15
KRT39-201ENST00000355612 LSG1Q9H089 658 aaKnown RBP7.89□□□□□ -1.15
KRT39-201ENST00000355612 PALD1Q9ULE6 856 aa7.89□□□□□ -1.15
KRT39-201ENST00000355612 ARIH1Q9Y4X5 557 aaPredicted RBP7.89□□□□□ -1.15
KRT39-201ENST00000355612 SLIT2O94813 1529 aa7.89□□□□□ -1.15
KRT39-201ENST00000355612 SPATA31A5Q5VU36 1347 aa7.88□□□□□ -1.15
KRT39-201ENST00000355612 SPATA31A7Q8IWB4 1347 aa7.88□□□□□ -1.15
KRT39-201ENST00000355612 NUTM2BA6NNL0 878 aaPredicted RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 NUTM2EB1AL46 878 aaPredicted RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 GOLGA6L22H0YM25 854 aa7.88□□□□□ -1.15
KRT39-201ENST00000355612 TRIM66O15016 1216 aa7.88□□□□□ -1.15
KRT39-201ENST00000355612 CIAO1O76071 339 aa7.88□□□□□ -1.15
KRT39-201ENST00000355612 PCCAP05165 728 aaPredicted RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 CYP19A1P11511 503 aaPredicted RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 HSPA1LP34931 641 aa7.88□□□□□ -1.15
KRT39-201ENST00000355612 PRIM1P49642 420 aaKnown RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 PSEN1P49768 467 aa7.88□□□□□ -1.15
KRT39-201ENST00000355612 PDE4DQ08499 809 aa7.88□□□□□ -1.15
KRT39-201ENST00000355612 GIGYF2Q6Y7W6 1299 aaKnown RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 NUTM2AQ8IVF1 878 aaPredicted RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 LARP6Q9BRS8 491 aaKnown RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 BOLA2Q9H3K6 86 aa7.88□□□□□ -1.15
KRT39-201ENST00000355612 GPR108Q9NPR9 543 aa7.88□□□□□ -1.15
KRT39-201ENST00000355612 DBNLQ9UJU6 430 aaKnown RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 CCDC9Q9Y3X0 531 aaKnown RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.88□□□□□ -1.15
KRT39-201ENST00000355612 ZNF831Q5JPB2 1677 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 CDHR2Q9BYE9 1310 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 ZNF609O15014 1411 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 COL5A3P25940 1745 aaPredicted RBP7.87□□□□□ -1.15
KRT39-201ENST00000355612 A0A0G2JS52 829 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 EYA2O00167 538 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 IL6STP40189 918 aaPredicted RBP7.87□□□□□ -1.15
KRT39-201ENST00000355612 KCNJ4P48050 445 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 CCDC57Q2TAC2 916 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 ZBTB38Q8NAP3 1195 aaPredicted RBP7.87□□□□□ -1.15
KRT39-201ENST00000355612 PLA2G12BQ9BX93 195 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 IL25Q9H293 177 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 MYH7P12883 1935 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 LAMB2P55268 1798 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 CCDC171Q6TFL3 1326 aa7.87□□□□□ -1.15
KRT39-201ENST00000355612 ERVV-1B6SEH8 477 aa7.86□□□□□ -1.15
KRT39-201ENST00000355612 ZKSCAN1P17029 563 aaPredicted RBP7.86□□□□□ -1.15
KRT39-201ENST00000355612 MLLT3P42568 568 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms