RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 HLA-DOAP06340 250 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 ZSCAN23Q3MJ62 389 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 JARID2Q92833 1246 aaPredicted RBP18.86■□□□□ 0.61
SHTN1-202ENST00000355371 DNAI2Q9GZS0 605 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 C8orf34Q49A92 452 aa18.85■□□□□ 0.61
SHTN1-202ENST00000355371 ZGPATQ8N5A5 531 aaKnown RBP18.85■□□□□ 0.61
SHTN1-202ENST00000355371 GOLGA6L7A0A1B0GV03 622 aa18.85■□□□□ 0.61
SHTN1-202ENST00000355371 LRSAM1Q6UWE0 723 aa18.85■□□□□ 0.61
SHTN1-202ENST00000355371 CCDC144CPQ8IYA2 1237 aa18.85■□□□□ 0.61
SHTN1-202ENST00000355371 CRACR2AQ9BSW2 395 aa18.85■□□□□ 0.61
SHTN1-202ENST00000355371 ZBTB40Q9NUA8 1239 aa18.85■□□□□ 0.61
SHTN1-202ENST00000355371 URI1O94763 535 aaPredicted RBP18.85■□□□□ 0.61
SHTN1-202ENST00000355371 FAM193AP78312 1265 aa18.85■□□□□ 0.61
SHTN1-202ENST00000355371 ZBTB43O43298 467 aa18.85■□□□□ 0.61
SHTN1-202ENST00000355371 RFC4P35249 363 aa18.85■□□□□ 0.61
SHTN1-202ENST00000355371 KCNG4Q8TDN1 519 aa18.85■□□□□ 0.61
SHTN1-202ENST00000355371 SMARCC1Q92922 1105 aaPredicted RBP18.84■□□□□ 0.61
SHTN1-202ENST00000355371 UBA7P41226 1012 aa18.84■□□□□ 0.61
SHTN1-202ENST00000355371 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
SHTN1-202ENST00000355371 NBPF5PQ86XG9 351 aaPredicted RBP18.84■□□□□ 0.61
SHTN1-202ENST00000355371 ESR2Q92731 530 aa18.84■□□□□ 0.61
SHTN1-202ENST00000355371 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
SHTN1-202ENST00000355371 ZRANB1Q9UGI0 708 aa18.84■□□□□ 0.61
SHTN1-202ENST00000355371 YTHDC2Q9H6S0 1430 aaKnown RBP18.84■□□□□ 0.61
SHTN1-202ENST00000355371 TNNT1P13805 278 aa18.84■□□□□ 0.61
SHTN1-202ENST00000355371 SLC39A6Q13433 755 aa18.84■□□□□ 0.61
SHTN1-202ENST00000355371 SMC5Q8IY18 1101 aa18.84■□□□□ 0.61
SHTN1-202ENST00000355371 UBA5Q9GZZ9 404 aa18.84■□□□□ 0.61
SHTN1-202ENST00000355371 ST5P78524 1137 aa18.83■□□□□ 0.61
SHTN1-202ENST00000355371 NBPF7P0C2Y1 421 aaPredicted RBP18.83■□□□□ 0.61
SHTN1-202ENST00000355371 TMC6Q7Z403 805 aa18.83■□□□□ 0.61
SHTN1-202ENST00000355371 CCDC150Q8NCX0 1101 aa18.83■□□□□ 0.61
SHTN1-202ENST00000355371 PZPP20742 1482 aa18.83■□□□□ 0.61
SHTN1-202ENST00000355371 BIN1O00499 593 aa18.83■□□□□ 0.6
SHTN1-202ENST00000355371 MTIF2P46199 727 aaKnown RBP18.83■□□□□ 0.6
SHTN1-202ENST00000355371 PPP4R3BQ5MIZ7 849 aa18.83■□□□□ 0.6
SHTN1-202ENST00000355371 FBXO3Q9UK99 471 aa18.83■□□□□ 0.6
SHTN1-202ENST00000355371 PER1O15534 1290 aaPredicted RBP18.82■□□□□ 0.6
SHTN1-202ENST00000355371 NECAB1Q8N987 351 aa18.82■□□□□ 0.6
SHTN1-202ENST00000355371 CABP5Q9NP86 173 aa18.82■□□□□ 0.6
SHTN1-202ENST00000355371 RMND1Q9NWS8 449 aa18.82■□□□□ 0.6
SHTN1-202ENST00000355371 ENOX2Q16206 610 aaKnown RBP18.82■□□□□ 0.6
SHTN1-202ENST00000355371 RBM27Q9P2N5 1060 aaKnown RBP18.82■□□□□ 0.6
SHTN1-202ENST00000355371 TSPYL6Q8N831 410 aa18.82■□□□□ 0.6
SHTN1-202ENST00000355371 BABAM1Q9NWV8 329 aa18.82■□□□□ 0.6
SHTN1-202ENST00000355371 STXBP4Q6ZWJ1 553 aa18.82■□□□□ 0.6
SHTN1-202ENST00000355371 CYP7A1P22680 504 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 GBP2P32456 591 aaPredicted RBP18.81■□□□□ 0.6
SHTN1-202ENST00000355371 PAG1Q9NWQ8 432 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 ADGRL2O95490 1459 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 RAD50Q92878 1312 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 PAFAH1B1P43034 410 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 SSR1P43307 286 aaKnown RBP18.81■□□□□ 0.6
SHTN1-202ENST00000355371 SYKP43405 635 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 CETN1Q12798 172 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 DCAF5Q96JK2 942 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 EYA1Q99502 592 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 CGNQ9P2M7 1197 aaKnown RBP18.81■□□□□ 0.6
SHTN1-202ENST00000355371 RLBP1P12271 317 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 PRKCSHP14314 528 aaPredicted RBP18.81■□□□□ 0.6
SHTN1-202ENST00000355371 IL2RBP14784 551 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 TAX1BP1Q86VP1 789 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 ALG1Q9BT22 464 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 SLC4A4Q9Y6R1 1079 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 POTEB2H3BUK9 544 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 GNAQP50148 359 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 NMIQ13287 307 aaPredicted RBP18.81■□□□□ 0.6
SHTN1-202ENST00000355371 KRI1Q8N9T8 703 aaKnown RBP18.81■□□□□ 0.6
SHTN1-202ENST00000355371 MAST1Q9Y2H9 1570 aa18.81■□□□□ 0.6
SHTN1-202ENST00000355371 RTN1Q16799 776 aa18.8■□□□□ 0.6
SHTN1-202ENST00000355371 Q6ZUG5 572 aa18.8■□□□□ 0.6
SHTN1-202ENST00000355371 C16orf71Q8IYS4 520 aaPredicted RBP18.8■□□□□ 0.6
SHTN1-202ENST00000355371 CPLX3Q8WVH0 158 aa18.8■□□□□ 0.6
SHTN1-202ENST00000355371 PHACTR3Q96KR7 559 aa18.8■□□□□ 0.6
SHTN1-202ENST00000355371 KIF21AQ7Z4S6 1674 aa18.8■□□□□ 0.6
SHTN1-202ENST00000355371 F13A1P00488 732 aa18.8■□□□□ 0.6
SHTN1-202ENST00000355371 GNAT2P19087 354 aa18.8■□□□□ 0.6
SHTN1-202ENST00000355371 ATP6V1AP38606 617 aa18.8■□□□□ 0.6
SHTN1-202ENST00000355371 C19orf44Q9H6X5 657 aa18.8■□□□□ 0.6
SHTN1-202ENST00000355371 ABCC2Q92887 1545 aa18.8■□□□□ 0.6
SHTN1-202ENST00000355371 TDRD12Q587J7 1177 aaKnown RBP18.79■□□□□ 0.6
SHTN1-202ENST00000355371 IFIT1BQ5T764 474 aaKnown RBP18.79■□□□□ 0.6
SHTN1-202ENST00000355371 ALS2CR12Q96Q35 445 aa18.79■□□□□ 0.6
SHTN1-202ENST00000355371 SETDB2Q96T68 719 aa18.79■□□□□ 0.6
SHTN1-202ENST00000355371 UTP14AQ9BVJ6 771 aaKnown RBP18.79■□□□□ 0.6
SHTN1-202ENST00000355371 HOXC9P31274 260 aa18.79■□□□□ 0.6
SHTN1-202ENST00000355371 IP6K1Q92551 441 aa18.79■□□□□ 0.6
SHTN1-202ENST00000355371 TRAF1Q13077 416 aa18.79■□□□□ 0.6
SHTN1-202ENST00000355371 CCDC40Q4G0X9 1142 aa18.79■□□□□ 0.6
SHTN1-202ENST00000355371 SLC9C2Q5TAH2 1124 aa18.79■□□□□ 0.6
SHTN1-202ENST00000355371 RAB11FIP4Q86YS3 637 aa18.79■□□□□ 0.6
SHTN1-202ENST00000355371 MRPS27Q92552 414 aaKnown RBP18.79■□□□□ 0.6
SHTN1-202ENST00000355371 NLRP3Q96P20 1036 aa18.79■□□□□ 0.6
SHTN1-202ENST00000355371 LRRC59Q96AG4 307 aaKnown RBP18.78■□□□□ 0.6
SHTN1-202ENST00000355371 RNF113AO15541 343 aaKnown RBP18.78■□□□□ 0.6
SHTN1-202ENST00000355371 IDEP14735 1019 aa18.78■□□□□ 0.6
SHTN1-202ENST00000355371 USP48Q86UV5 1035 aa18.78■□□□□ 0.6
SHTN1-202ENST00000355371 CNPY2Q9Y2B0 182 aa18.78■□□□□ 0.6
SHTN1-202ENST00000355371 PLEKHM2Q8IWE5 1019 aa18.78■□□□□ 0.6
SHTN1-202ENST00000355371 ANKRD62A6NC57 917 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms