RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 EN1Q05925 392 aaPredicted RBP11.84□□□□□ -0.51
NPHP1-202ENST00000355301 IFIT5Q13325 482 aaKnown RBP11.84□□□□□ -0.51
NPHP1-202ENST00000355301 EZH2Q15910 746 aaKnown RBP11.84□□□□□ -0.51
NPHP1-202ENST00000355301 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 CLASRPQ8N2M8 674 aaKnown RBP11.84□□□□□ -0.51
NPHP1-202ENST00000355301 FLAD1Q8NFF5 587 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 BACH2Q9BYV9 841 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 GREM2Q9H772 168 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 CARMIL3Q8ND23 1372 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 CIAO1O76071 339 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 MX1P20591 662 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 PDE1AP54750 535 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 SF3B2Q13435 895 aaKnown RBP11.84□□□□□ -0.51
NPHP1-202ENST00000355301 C8orf34Q49A92 452 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 SLC10A5Q5PT55 438 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 BCL11AQ9H165 835 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 STAP2Q9UGK3 403 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 RTL9Q8NET4 1388 aa11.84□□□□□ -0.51
NPHP1-202ENST00000355301 EYA2O00167 538 aa11.83□□□□□ -0.52
NPHP1-202ENST00000355301 ITGA6P23229 1130 aa11.83□□□□□ -0.52
NPHP1-202ENST00000355301 IL15P40933 162 aaPredicted RBP11.83□□□□□ -0.52
NPHP1-202ENST00000355301 BAG6P46379 1132 aa11.83□□□□□ -0.52
NPHP1-202ENST00000355301 NFIXQ14938 502 aa11.83□□□□□ -0.52
NPHP1-202ENST00000355301 ERFEQ4G0M1 354 aa11.83□□□□□ -0.52
NPHP1-202ENST00000355301 TPTE2Q6XPS3 522 aa11.83□□□□□ -0.52
NPHP1-202ENST00000355301 ATG9AQ7Z3C6 839 aa11.83□□□□□ -0.52
NPHP1-202ENST00000355301 NBPF5PQ86XG9 351 aaPredicted RBP11.83□□□□□ -0.52
NPHP1-202ENST00000355301 ANKRD18BA2A2Z9 1011 aa11.82□□□□□ -0.52
NPHP1-202ENST00000355301 TTC22Q5TAA0 569 aa11.82□□□□□ -0.52
NPHP1-202ENST00000355301 ZNF594Q96JF6 807 aaPredicted RBP11.82□□□□□ -0.52
NPHP1-202ENST00000355301 CCDC85AQ96PX6 553 aaPredicted RBP11.82□□□□□ -0.52
NPHP1-202ENST00000355301 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.82□□□□□ -0.52
NPHP1-202ENST00000355301 AOX1Q06278 1338 aa11.82□□□□□ -0.52
NPHP1-202ENST00000355301 GTF2E1P29083 439 aaPredicted RBP11.82□□□□□ -0.52
NPHP1-202ENST00000355301 TM4SF1P30408 202 aa11.82□□□□□ -0.52
NPHP1-202ENST00000355301 CCDC152Q4G0S7 254 aa11.82□□□□□ -0.52
NPHP1-202ENST00000355301 COL23A1Q86Y22 540 aaPredicted RBP11.82□□□□□ -0.52
NPHP1-202ENST00000355301 CCDC125Q86Z20 511 aa11.82□□□□□ -0.52
NPHP1-202ENST00000355301 CASZ1Q86V15 1759 aa11.81□□□□□ -0.52
NPHP1-202ENST00000355301 QSER1Q2KHR3 1735 aa11.81□□□□□ -0.52
NPHP1-202ENST00000355301 LRP5O75197 1615 aa11.81□□□□□ -0.52
NPHP1-202ENST00000355301 ABCC12Q96J65 1359 aa11.81□□□□□ -0.52
NPHP1-202ENST00000355301 PNPLA7Q6ZV29 1317 aa11.81□□□□□ -0.52
NPHP1-202ENST00000355301 GSPT1P15170 499 aaKnown RBP11.81□□□□□ -0.52
NPHP1-202ENST00000355301 SF3B3Q15393 1217 aaKnown RBP11.81□□□□□ -0.52
NPHP1-202ENST00000355301 LRRC24Q50LG9 513 aa11.81□□□□□ -0.52
NPHP1-202ENST00000355301 TAF7LQ5H9L4 462 aa11.81□□□□□ -0.52
NPHP1-202ENST00000355301 EAF2Q96CJ1 260 aaPredicted RBP11.81□□□□□ -0.52
NPHP1-202ENST00000355301 TTC41PQ6P2S7 1318 aa11.8□□□□□ -0.52
NPHP1-202ENST00000355301 IFIT2P09913 472 aaKnown RBP11.8□□□□□ -0.52
NPHP1-202ENST00000355301 TFCP2Q12800 502 aa11.8□□□□□ -0.52
NPHP1-202ENST00000355301 SLC15A2Q16348 729 aa11.8□□□□□ -0.52
NPHP1-202ENST00000355301 AACSQ86V21 672 aa11.8□□□□□ -0.52
NPHP1-202ENST00000355301 PUS3Q9BZE2 481 aaKnown RBP11.8□□□□□ -0.52
NPHP1-202ENST00000355301 GPR108Q9NPR9 543 aa11.8□□□□□ -0.52
NPHP1-202ENST00000355301 RIC1Q4ADV7 1423 aa11.8□□□□□ -0.52
NPHP1-202ENST00000355301 LDHAL6AQ6ZMR3 332 aa11.8□□□□□ -0.52
NPHP1-202ENST00000355301 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
NPHP1-202ENST00000355301 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
NPHP1-202ENST00000355301 RIPOR2Q9Y4F9 1068 aa11.8□□□□□ -0.52
NPHP1-202ENST00000355301 TNNI3KQ59H18 835 aa11.79□□□□□ -0.52
NPHP1-202ENST00000355301 C3orf67Q6ZVT6 689 aa11.79□□□□□ -0.52
NPHP1-202ENST00000355301 DEFB132Q7Z7B7 95 aa11.79□□□□□ -0.52
NPHP1-202ENST00000355301 CNBD1Q8NA66 436 aa11.79□□□□□ -0.52
NPHP1-202ENST00000355301 NLRP3Q96P20 1036 aa11.79□□□□□ -0.52
NPHP1-202ENST00000355301 FPGT-TNNI3KV9GXZ4 949 aa11.79□□□□□ -0.52
NPHP1-202ENST00000355301 TSHZ3Q63HK5 1081 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 PRR5LQ6MZQ0 368 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 PI4K2BQ8TCG2 481 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 ECHDC1Q9NTX5 307 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 STK32BQ9NY57 414 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 CEP126Q9P2H0 1117 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 POLRMTO00411 1230 aaKnown RBP11.78□□□□□ -0.52
NPHP1-202ENST00000355301 NPHP1O15259 732 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 MSH5O43196 834 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 SERPINB2P05120 415 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 DDR1Q08345 913 aa11.78□□□□□ -0.52
NPHP1-202ENST00000355301 CCDC8Q9H0W5 538 aaPredicted RBP11.78□□□□□ -0.52
NPHP1-202ENST00000355301 TNRC6CQ9HCJ0 1690 aaKnown RBP11.77□□□□□ -0.52
NPHP1-202ENST00000355301 ERC2O15083 957 aa11.77□□□□□ -0.53
NPHP1-202ENST00000355301 GLRX3O76003 335 aaKnown RBP11.77□□□□□ -0.53
NPHP1-202ENST00000355301 SDSP20132 328 aa11.77□□□□□ -0.53
NPHP1-202ENST00000355301 CDC5LQ99459 802 aaKnown RBP11.77□□□□□ -0.53
NPHP1-202ENST00000355301 CNNM1Q9NRU3 951 aa11.77□□□□□ -0.53
NPHP1-202ENST00000355301 TLR7Q9NYK1 1049 aaKnown RBP11.77□□□□□ -0.53
NPHP1-202ENST00000355301 DBNLQ9UJU6 430 aaKnown RBP11.77□□□□□ -0.53
NPHP1-202ENST00000355301 ZNF609O15014 1411 aa11.77□□□□□ -0.53
NPHP1-202ENST00000355301 NRXN2Q9P2S2 1712 aa11.77□□□□□ -0.53
NPHP1-202ENST00000355301 IGHMBP2P38935 993 aaKnown RBP11.76□□□□□ -0.53
NPHP1-202ENST00000355301 ST5P78524 1137 aa11.76□□□□□ -0.53
NPHP1-202ENST00000355301 VGLL2Q8N8G2 317 aa11.76□□□□□ -0.53
NPHP1-202ENST00000355301 MPHOSPH8Q99549 860 aa11.76□□□□□ -0.53
NPHP1-202ENST00000355301 AKAP2Q9Y2D5 859 aa11.76□□□□□ -0.53
NPHP1-202ENST00000355301 MROH5Q6ZUA9 1318 aa11.76□□□□□ -0.53
NPHP1-202ENST00000355301 METTL24Q5JXM2 366 aa11.76□□□□□ -0.53
NPHP1-202ENST00000355301 CCDC24Q8N4L8 307 aa11.76□□□□□ -0.53
NPHP1-202ENST00000355301 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms