RNA–Protein interactions for RNA: ENST00000355135.6

GPM6B-202, Transcript of glycoprotein M6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPM6B, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-202ENST00000355135 ARFGEF2Q9Y6D5 1785 aa17.13■□□□□ 0.33
GPM6B-202ENST00000355135 NBPF7P0C2Y1 421 aaPredicted RBP17.13■□□□□ 0.33
GPM6B-202ENST00000355135 BMP2KLQ5H9B9 411 aa17.13■□□□□ 0.33
GPM6B-202ENST00000355135 ANKRD13DQ6ZTN6 518 aa17.13■□□□□ 0.33
GPM6B-202ENST00000355135 LINS1Q8NG48 757 aa17.13■□□□□ 0.33
GPM6B-202ENST00000355135 PLBD2Q8NHP8 589 aa17.13■□□□□ 0.33
GPM6B-202ENST00000355135 KLRG2A4D1S0 409 aaPredicted RBP17.12■□□□□ 0.33
GPM6B-202ENST00000355135 SEC24BO95487 1268 aa17.12■□□□□ 0.33
GPM6B-202ENST00000355135 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
GPM6B-202ENST00000355135 SUSD4Q5VX71 490 aa17.12■□□□□ 0.33
GPM6B-202ENST00000355135 ARHGAP27Q6ZUM4 889 aa17.12■□□□□ 0.33
GPM6B-202ENST00000355135 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
GPM6B-202ENST00000355135 RIC3Q7Z5B4 369 aa17.12■□□□□ 0.33
GPM6B-202ENST00000355135 ZNF622Q969S3 477 aaKnown RBP eCLIP17.12■□□□□ 0.33
GPM6B-202ENST00000355135 SRGNP10124 158 aa17.11■□□□□ 0.33
GPM6B-202ENST00000355135 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
GPM6B-202ENST00000355135 APBB1O00213 710 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 NTSR2O95665 410 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 CWF19L2Q2TBE0 894 aaKnown RBP17.1■□□□□ 0.33
GPM6B-202ENST00000355135 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 PLEKHM2Q8IWE5 1019 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 MASTLQ96GX5 879 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 RIC1Q4ADV7 1423 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
GPM6B-202ENST00000355135 POLA2Q14181 598 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 ERFEQ4G0M1 354 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 CNKSR1Q969H4 720 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 UTP14AQ9BVJ6 771 aaKnown RBP17.1■□□□□ 0.33
GPM6B-202ENST00000355135 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
GPM6B-202ENST00000355135 EXOC6BQ9Y2D4 811 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 ABCC12Q96J65 1359 aa17.1■□□□□ 0.33
GPM6B-202ENST00000355135 CACNA1SQ13698 1873 aa17.09■□□□□ 0.33
GPM6B-202ENST00000355135 NPR1P16066 1061 aa17.09■□□□□ 0.33
GPM6B-202ENST00000355135 NEXNQ0ZGT2 675 aa17.09■□□□□ 0.33
GPM6B-202ENST00000355135 NLRP10Q86W26 655 aa17.09■□□□□ 0.33
GPM6B-202ENST00000355135 METTL22Q9BUU2 404 aaPredicted RBP17.09■□□□□ 0.33
GPM6B-202ENST00000355135 UTYO14607 1347 aa17.09■□□□□ 0.33
GPM6B-202ENST00000355135 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
GPM6B-202ENST00000355135 IGKV5-2P06315 115 aa17.08■□□□□ 0.32
GPM6B-202ENST00000355135 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
GPM6B-202ENST00000355135 ZNF784Q8NCA9 323 aaPredicted RBP17.08■□□□□ 0.32
GPM6B-202ENST00000355135 HDAC5Q9UQL6 1122 aa17.08■□□□□ 0.32
GPM6B-202ENST00000355135 SLX4Q8IY92 1834 aa17.08■□□□□ 0.32
GPM6B-202ENST00000355135 GRM8O00222 908 aa17.07■□□□□ 0.32
GPM6B-202ENST00000355135 OTUD7AQ8TE49 926 aaPredicted RBP17.07■□□□□ 0.32
GPM6B-202ENST00000355135 DDRGK1Q96HY6 314 aa17.07■□□□□ 0.32
GPM6B-202ENST00000355135 ISCA1Q9BUE6 129 aa17.07■□□□□ 0.32
GPM6B-202ENST00000355135 NEURL1BA8MQ27 555 aa17.07■□□□□ 0.32
GPM6B-202ENST00000355135 MTX1Q13505 466 aa17.07■□□□□ 0.32
GPM6B-202ENST00000355135 CRY2Q49AN0 593 aa17.07■□□□□ 0.32
GPM6B-202ENST00000355135 SLC10A5Q5PT55 438 aa17.07■□□□□ 0.32
GPM6B-202ENST00000355135 MYD88Q99836 296 aa17.07■□□□□ 0.32
GPM6B-202ENST00000355135 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
GPM6B-202ENST00000355135 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
GPM6B-202ENST00000355135 SBF1O95248 1867 aa17.06■□□□□ 0.32
GPM6B-202ENST00000355135 SRGAP3O43295 1099 aa17.06■□□□□ 0.32
GPM6B-202ENST00000355135 GSPT1P15170 499 aaKnown RBP17.06■□□□□ 0.32
GPM6B-202ENST00000355135 TTC22Q5TAA0 569 aa17.06■□□□□ 0.32
GPM6B-202ENST00000355135 PRPF40BQ6NWY9 871 aaKnown RBP17.06■□□□□ 0.32
GPM6B-202ENST00000355135 NOP58Q9Y2X3 529 aaKnown RBP17.06■□□□□ 0.32
GPM6B-202ENST00000355135 TRIM28Q13263 835 aaKnown RBP17.05■□□□□ 0.32
GPM6B-202ENST00000355135 BCL11AQ9H165 835 aa17.05■□□□□ 0.32
GPM6B-202ENST00000355135 TRMT112Q9UI30 125 aaKnown RBP17.05■□□□□ 0.32
GPM6B-202ENST00000355135 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
GPM6B-202ENST00000355135 ALDH1B1P30837 517 aa17.04■□□□□ 0.32
GPM6B-202ENST00000355135 GCKRQ14397 625 aa17.04■□□□□ 0.32
GPM6B-202ENST00000355135 ATP5J2-PTCD1G3V325 749 aa17.04■□□□□ 0.32
GPM6B-202ENST00000355135 C21orf2O43822 256 aa17.04■□□□□ 0.32
GPM6B-202ENST00000355135 RAB11FIP3O75154 756 aa17.04■□□□□ 0.32
GPM6B-202ENST00000355135 SUCLG2Q96I99 432 aa17.04■□□□□ 0.32
GPM6B-202ENST00000355135 TBC1D32Q96NH3 1257 aa17.04■□□□□ 0.32
GPM6B-202ENST00000355135 NLRP3Q96P20 1036 aa17.04■□□□□ 0.32
GPM6B-202ENST00000355135 FER1L6Q2WGJ9 1857 aa17.03■□□□□ 0.32
GPM6B-202ENST00000355135 SALL3Q9BXA9 1300 aa17.03■□□□□ 0.32
GPM6B-202ENST00000355135 HOXA10P31260 410 aaPredicted RBP17.03■□□□□ 0.32
GPM6B-202ENST00000355135 SOGA3Q5TF21 947 aa17.03■□□□□ 0.32
GPM6B-202ENST00000355135 RPGRQ92834 1020 aaKnown RBP17.03■□□□□ 0.32
GPM6B-202ENST00000355135 LAMB2P55268 1798 aa17.02■□□□□ 0.32
GPM6B-202ENST00000355135 SURF6O75683 361 aaKnown RBP17.02■□□□□ 0.32
GPM6B-202ENST00000355135 C9orf131Q5VYM1 1079 aa17.02■□□□□ 0.32
GPM6B-202ENST00000355135 KAZALD1Q96I82 304 aa17.02■□□□□ 0.32
GPM6B-202ENST00000355135 OSBPL3Q9H4L5 887 aa17.02■□□□□ 0.32
GPM6B-202ENST00000355135 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
GPM6B-202ENST00000355135 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
GPM6B-202ENST00000355135 CDC45O75419 566 aa17.01■□□□□ 0.31
GPM6B-202ENST00000355135 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
GPM6B-202ENST00000355135 RASSF7Q02833 373 aa17.01■□□□□ 0.31
GPM6B-202ENST00000355135 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
GPM6B-202ENST00000355135 C7orf43Q8WVR3 580 aa17.01■□□□□ 0.31
GPM6B-202ENST00000355135 RBM17Q96I25 401 aaKnown RBP17.01■□□□□ 0.31
GPM6B-202ENST00000355135 DDX60Q8IY21 1712 aaKnown RBP17.01■□□□□ 0.31
GPM6B-202ENST00000355135 NFKBIEO00221 500 aa17.01■□□□□ 0.31
GPM6B-202ENST00000355135 HCLS1P14317 486 aaPredicted RBP17.01■□□□□ 0.31
GPM6B-202ENST00000355135 PDE1AP54750 535 aa17.01■□□□□ 0.31
GPM6B-202ENST00000355135 HSP90AB4PQ58FF6 505 aa17.01■□□□□ 0.31
GPM6B-202ENST00000355135 ERICH6Q7L0X2 663 aa17.01■□□□□ 0.31
GPM6B-202ENST00000355135 SYNE4Q8N205 404 aa17.01■□□□□ 0.31
GPM6B-202ENST00000355135 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
GPM6B-202ENST00000355135 TBC1D9Q6ZT07 1266 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms