RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SASH1O94885 1247 aa19.23■□□□□ 0.67
CTSA-202ENST00000354880 IFIT5Q13325 482 aaKnown RBP19.23■□□□□ 0.67
CTSA-202ENST00000354880 CCDC85AQ96PX6 553 aaPredicted RBP19.23■□□□□ 0.67
CTSA-202ENST00000354880 GTF2E1P29083 439 aaPredicted RBP19.23■□□□□ 0.67
CTSA-202ENST00000354880 NBPF5PQ86XG9 351 aaPredicted RBP19.23■□□□□ 0.67
CTSA-202ENST00000354880 FLAD1Q8NFF5 587 aa19.23■□□□□ 0.67
CTSA-202ENST00000354880 GREM2Q9H772 168 aa19.23■□□□□ 0.67
CTSA-202ENST00000354880 CARMIL3Q8ND23 1372 aa19.22■□□□□ 0.67
CTSA-202ENST00000354880 TUBGCP6Q96RT7 1819 aa19.22■□□□□ 0.67
CTSA-202ENST00000354880 ERFEQ4G0M1 354 aa19.22■□□□□ 0.67
CTSA-202ENST00000354880 TPTE2Q6XPS3 522 aa19.22■□□□□ 0.67
CTSA-202ENST00000354880 CLASRPQ8N2M8 674 aaKnown RBP19.22■□□□□ 0.67
CTSA-202ENST00000354880 SALL3Q9BXA9 1300 aa19.21■□□□□ 0.67
CTSA-202ENST00000354880 ITGA6P23229 1130 aa19.21■□□□□ 0.67
CTSA-202ENST00000354880 NFIXQ14938 502 aa19.21■□□□□ 0.67
CTSA-202ENST00000354880 ZNF594Q96JF6 807 aaPredicted RBP19.21■□□□□ 0.67
CTSA-202ENST00000354880 TSHZ2Q9NRE2 1034 aa19.21■□□□□ 0.67
CTSA-202ENST00000354880 TAF7LQ5H9L4 462 aa19.21■□□□□ 0.67
CTSA-202ENST00000354880 OSBPL3Q9H4L5 887 aa19.21■□□□□ 0.67
CTSA-202ENST00000354880 ANKRD18BA2A2Z9 1011 aa19.2■□□□□ 0.66
CTSA-202ENST00000354880 EYA2O00167 538 aa19.2■□□□□ 0.66
CTSA-202ENST00000354880 MX1P20591 662 aa19.2■□□□□ 0.66
CTSA-202ENST00000354880 PDE1AP54750 535 aa19.2■□□□□ 0.66
CTSA-202ENST00000354880 BMP2KLQ5H9B9 411 aa19.2■□□□□ 0.66
CTSA-202ENST00000354880 SLC10A5Q5PT55 438 aa19.2■□□□□ 0.66
CTSA-202ENST00000354880 COL23A1Q86Y22 540 aaPredicted RBP19.2■□□□□ 0.66
CTSA-202ENST00000354880 BACH2Q9BYV9 841 aa19.2■□□□□ 0.66
CTSA-202ENST00000354880 FBXO3Q9UK99 471 aa19.2■□□□□ 0.66
CTSA-202ENST00000354880 CIAO1O76071 339 aa19.19■□□□□ 0.66
CTSA-202ENST00000354880 IL15P40933 162 aaPredicted RBP19.19■□□□□ 0.66
CTSA-202ENST00000354880 CCDC152Q4G0S7 254 aa19.19■□□□□ 0.66
CTSA-202ENST00000354880 ATG9AQ7Z3C6 839 aa19.19■□□□□ 0.66
CTSA-202ENST00000354880 MSH5O43196 834 aa19.18■□□□□ 0.66
CTSA-202ENST00000354880 C8orf34Q49A92 452 aa19.18■□□□□ 0.66
CTSA-202ENST00000354880 DEFB132Q7Z7B7 95 aa19.18■□□□□ 0.66
CTSA-202ENST00000354880 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.18■□□□□ 0.66
CTSA-202ENST00000354880 ABCC12Q96J65 1359 aa19.18■□□□□ 0.66
CTSA-202ENST00000354880 LRRC24Q50LG9 513 aa19.18■□□□□ 0.66
CTSA-202ENST00000354880 TTC22Q5TAA0 569 aa19.18■□□□□ 0.66
CTSA-202ENST00000354880 STAP2Q9UGK3 403 aa19.18■□□□□ 0.66
CTSA-202ENST00000354880 PNPLA7Q6ZV29 1317 aa19.17■□□□□ 0.66
CTSA-202ENST00000354880 NPHP1O15259 732 aa19.17■□□□□ 0.66
CTSA-202ENST00000354880 TM4SF1P30408 202 aa19.17■□□□□ 0.66
CTSA-202ENST00000354880 TFCP2Q12800 502 aa19.17■□□□□ 0.66
CTSA-202ENST00000354880 SLC15A2Q16348 729 aa19.17■□□□□ 0.66
CTSA-202ENST00000354880 CCDC125Q86Z20 511 aa19.17■□□□□ 0.66
CTSA-202ENST00000354880 PUS3Q9BZE2 481 aaKnown RBP19.17■□□□□ 0.66
CTSA-202ENST00000354880 ANO8Q9HCE9 1232 aaPredicted RBP19.17■□□□□ 0.66
CTSA-202ENST00000354880 RTL9Q8NET4 1388 aa19.17■□□□□ 0.66
CTSA-202ENST00000354880 IFIT2P09913 472 aaKnown RBP19.16■□□□□ 0.66
CTSA-202ENST00000354880 GSPT1P15170 499 aaKnown RBP19.16■□□□□ 0.66
CTSA-202ENST00000354880 SF3B3Q15393 1217 aaKnown RBP19.16■□□□□ 0.66
CTSA-202ENST00000354880 AACSQ86V21 672 aa19.16■□□□□ 0.66
CTSA-202ENST00000354880 EAF2Q96CJ1 260 aaPredicted RBP19.16■□□□□ 0.66
CTSA-202ENST00000354880 STK32BQ9NY57 414 aa19.16■□□□□ 0.66
CTSA-202ENST00000354880 LDHAL6AQ6ZMR3 332 aa19.16■□□□□ 0.66
CTSA-202ENST00000354880 CNBD1Q8NA66 436 aa19.16■□□□□ 0.66
CTSA-202ENST00000354880 AOX1Q06278 1338 aa19.15■□□□□ 0.66
CTSA-202ENST00000354880 TSHZ3Q63HK5 1081 aa19.15■□□□□ 0.66
CTSA-202ENST00000354880 NLGN1Q8N2Q7 840 aa19.15■□□□□ 0.66
CTSA-202ENST00000354880 NLRP3Q96P20 1036 aa19.15■□□□□ 0.66
CTSA-202ENST00000354880 TNNI3KQ59H18 835 aa19.14■□□□□ 0.65
CTSA-202ENST00000354880 C3orf67Q6ZVT6 689 aa19.14■□□□□ 0.65
CTSA-202ENST00000354880 FPGT-TNNI3KV9GXZ4 949 aa19.14■□□□□ 0.65
CTSA-202ENST00000354880 CASZ1Q86V15 1759 aa19.14■□□□□ 0.65
CTSA-202ENST00000354880 SERPINB2P05120 415 aa19.14■□□□□ 0.65
CTSA-202ENST00000354880 CCDC24Q8N4L8 307 aa19.14■□□□□ 0.65
CTSA-202ENST00000354880 CCDC8Q9H0W5 538 aaPredicted RBP19.14■□□□□ 0.65
CTSA-202ENST00000354880 SEC31BQ9NQW1 1179 aa19.14■□□□□ 0.65
CTSA-202ENST00000354880 CNNM1Q9NRU3 951 aa19.14■□□□□ 0.65
CTSA-202ENST00000354880 CEP126Q9P2H0 1117 aa19.14■□□□□ 0.65
CTSA-202ENST00000354880 TTC41PQ6P2S7 1318 aa19.13■□□□□ 0.65
CTSA-202ENST00000354880 PRR5LQ6MZQ0 368 aa19.13■□□□□ 0.65
CTSA-202ENST00000354880 GPATCH3Q96I76 525 aa19.13■□□□□ 0.65
CTSA-202ENST00000354880 GPR108Q9NPR9 543 aa19.13■□□□□ 0.65
CTSA-202ENST00000354880 RIPOR2Q9Y4F9 1068 aa19.13■□□□□ 0.65
CTSA-202ENST00000354880 POLRMTO00411 1230 aaKnown RBP19.12■□□□□ 0.65
CTSA-202ENST00000354880 DDR1Q08345 913 aa19.12■□□□□ 0.65
CTSA-202ENST00000354880 QSER1Q2KHR3 1735 aa19.12■□□□□ 0.65
CTSA-202ENST00000354880 LRP5O75197 1615 aa19.12■□□□□ 0.65
CTSA-202ENST00000354880 CDC5LQ99459 802 aaKnown RBP19.11■□□□□ 0.65
CTSA-202ENST00000354880 MPHOSPH8Q99549 860 aa19.11■□□□□ 0.65
CTSA-202ENST00000354880 ECHDC1Q9NTX5 307 aa19.11■□□□□ 0.65
CTSA-202ENST00000354880 RIC1Q4ADV7 1423 aa19.11■□□□□ 0.65
CTSA-202ENST00000354880 IGHMBP2P38935 993 aaKnown RBP19.11■□□□□ 0.65
CTSA-202ENST00000354880 ST5P78524 1137 aa19.11■□□□□ 0.65
CTSA-202ENST00000354880 PI4K2BQ8TCG2 481 aa19.11■□□□□ 0.65
CTSA-202ENST00000354880 TLR7Q9NYK1 1049 aaKnown RBP19.11■□□□□ 0.65
CTSA-202ENST00000354880 ERC2O15083 957 aa19.1■□□□□ 0.65
CTSA-202ENST00000354880 METTL24Q5JXM2 366 aa19.1■□□□□ 0.65
CTSA-202ENST00000354880 GLRX3O76003 335 aaKnown RBP19.09■□□□□ 0.65
CTSA-202ENST00000354880 SDSP20132 328 aa19.09■□□□□ 0.65
CTSA-202ENST00000354880 DBNLQ9UJU6 430 aaKnown RBP19.09■□□□□ 0.65
CTSA-202ENST00000354880 AKAP2Q9Y2D5 859 aa19.09■□□□□ 0.65
CTSA-202ENST00000354880 ZNF609O15014 1411 aa19.09■□□□□ 0.65
CTSA-202ENST00000354880 TNRC6CQ9HCJ0 1690 aaKnown RBP19.09■□□□□ 0.65
CTSA-202ENST00000354880 MROH5Q6ZUA9 1318 aa19.09■□□□□ 0.65
CTSA-202ENST00000354880 TIMM10P62072 90 aa19.08■□□□□ 0.64
CTSA-202ENST00000354880 ANKRD18AQ8IVF6 992 aa19.08■□□□□ 0.64
CTSA-202ENST00000354880 NEUROD6Q96NK8 337 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms