RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 BBOX1O75936 387 aa23.95■■□□□ 1.42
VPS72-201ENST00000354473 GCKRQ14397 625 aa23.95■■□□□ 1.42
VPS72-201ENST00000354473 MRPL50Q8N5N7 158 aaKnown RBP23.95■■□□□ 1.42
VPS72-201ENST00000354473 ATP6V0A2Q9Y487 856 aa23.95■■□□□ 1.42
VPS72-201ENST00000354473 UBE3BQ7Z3V4 1068 aa23.94■■□□□ 1.42
VPS72-201ENST00000354473 BCL2L13Q9BXK5 485 aa23.94■■□□□ 1.42
VPS72-201ENST00000354473 TMX4Q9H1E5 349 aaPredicted RBP23.94■■□□□ 1.42
VPS72-201ENST00000354473 ZNF277Q9NRM2 450 aaPredicted RBP23.94■■□□□ 1.42
VPS72-201ENST00000354473 COL4A1P02462 1669 aa23.94■■□□□ 1.42
VPS72-201ENST00000354473 GRIPAP1Q4V328 841 aa23.93■■□□□ 1.42
VPS72-201ENST00000354473 PSMD1Q99460 953 aa23.93■■□□□ 1.42
VPS72-201ENST00000354473 CT47B1P0C2W7 299 aaPredicted RBP23.92■■□□□ 1.42
VPS72-201ENST00000354473 BEND3Q5T5X7 828 aa23.92■■□□□ 1.42
VPS72-201ENST00000354473 LRRC37AA6NMS7 1700 aa23.92■■□□□ 1.42
VPS72-201ENST00000354473 H7C1W4 665 aa23.91■■□□□ 1.42
VPS72-201ENST00000354473 ALDH1L2Q3SY69 923 aa23.91■■□□□ 1.42
VPS72-201ENST00000354473 CCDC152Q4G0S7 254 aa23.91■■□□□ 1.42
VPS72-201ENST00000354473 CELF1Q92879 486 aaKnown RBP23.91■■□□□ 1.42
VPS72-201ENST00000354473 SMC4Q9NTJ3 1288 aa23.91■■□□□ 1.42
VPS72-201ENST00000354473 KDM2BQ8NHM5 1336 aa23.91■■□□□ 1.42
VPS72-201ENST00000354473 CTSWP56202 376 aa23.9■■□□□ 1.42
VPS72-201ENST00000354473 SLC4A10Q6U841 1118 aa23.9■■□□□ 1.42
VPS72-201ENST00000354473 SP8Q8IXZ3 490 aa23.9■■□□□ 1.42
VPS72-201ENST00000354473 CCDC85AQ96PX6 553 aaPredicted RBP23.9■■□□□ 1.42
VPS72-201ENST00000354473 PTPRCP08575 1304 aa23.9■■□□□ 1.42
VPS72-201ENST00000354473 IARSP41252 1262 aaKnown RBP23.89■■□□□ 1.42
VPS72-201ENST00000354473 TMC4Q7Z404 712 aa23.89■■□□□ 1.42
VPS72-201ENST00000354473 NMRK2Q9NPI5 230 aa23.89■■□□□ 1.42
VPS72-201ENST00000354473 SEC31BQ9NQW1 1179 aa23.89■■□□□ 1.42
VPS72-201ENST00000354473 CASP7P55210 303 aa23.87■■□□□ 1.41
VPS72-201ENST00000354473 GLTPD2A6NH11 291 aa23.86■■□□□ 1.41
VPS72-201ENST00000354473 RPS8P62241 208 aaKnown RBP23.86■■□□□ 1.41
VPS72-201ENST00000354473 DPP8Q6V1X1 898 aaPredicted RBP23.86■■□□□ 1.41
VPS72-201ENST00000354473 MPNDQ8N594 471 aa23.86■■□□□ 1.41
VPS72-201ENST00000354473 TTLL11Q8NHH1 800 aa23.86■■□□□ 1.41
VPS72-201ENST00000354473 SRCIN1Q9C0H9 1055 aa23.86■■□□□ 1.41
VPS72-201ENST00000354473 ALDH1L1O75891 902 aa23.85■■□□□ 1.41
VPS72-201ENST00000354473 PLA2G12BQ9BX93 195 aa23.85■■□□□ 1.41
VPS72-201ENST00000354473 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
VPS72-201ENST00000354473 SPEF2Q9C093 1822 aa23.85■■□□□ 1.41
VPS72-201ENST00000354473 COL4A5P29400 1685 aa23.85■■□□□ 1.41
VPS72-201ENST00000354473 KIF3CO14782 793 aa23.84■■□□□ 1.41
VPS72-201ENST00000354473 DPY19L2Q6NUT2 758 aa23.84■■□□□ 1.41
VPS72-201ENST00000354473 DUOX1Q9NRD9 1551 aa23.84■■□□□ 1.41
VPS72-201ENST00000354473 GRM8O00222 908 aa23.84■■□□□ 1.41
VPS72-201ENST00000354473 SUPT20HQ8NEM7 779 aa23.84■■□□□ 1.41
VPS72-201ENST00000354473 JDP2Q8WYK2 163 aa23.84■■□□□ 1.41
VPS72-201ENST00000354473 RTFDC1Q9BY42 306 aaPredicted RBP23.84■■□□□ 1.41
VPS72-201ENST00000354473 GREM2Q9H772 168 aa23.84■■□□□ 1.41
VPS72-201ENST00000354473 RTL9Q8NET4 1388 aa23.83■■□□□ 1.41
VPS72-201ENST00000354473 RARSP54136 660 aaKnown RBP23.83■■□□□ 1.4
VPS72-201ENST00000354473 ANKRD18AQ8IVF6 992 aa23.83■■□□□ 1.4
VPS72-201ENST00000354473 LARGE2Q8N3Y3 721 aa23.83■■□□□ 1.4
VPS72-201ENST00000354473 CDC5LQ99459 802 aaKnown RBP23.83■■□□□ 1.4
VPS72-201ENST00000354473 C9orf78Q9NZ63 289 aaPredicted RBP23.83■■□□□ 1.4
VPS72-201ENST00000354473 LTBP1Q14766 1721 aa23.82■■□□□ 1.4
VPS72-201ENST00000354473 PPIP5K2O43314 1243 aa23.82■■□□□ 1.4
VPS72-201ENST00000354473 AOC3Q16853 763 aa23.82■■□□□ 1.4
VPS72-201ENST00000354473 RRAGCQ9HB90 399 aa23.82■■□□□ 1.4
VPS72-201ENST00000354473 ZNF541Q9H0D2 1346 aa23.82■■□□□ 1.4
VPS72-201ENST00000354473 WDR90Q96KV7 1748 aa23.81■■□□□ 1.4
VPS72-201ENST00000354473 C1QTNF8P60827 252 aa23.81■■□□□ 1.4
VPS72-201ENST00000354473 GPSM2P81274 684 aa23.81■■□□□ 1.4
VPS72-201ENST00000354473 NSFL1CQ9UNZ2 370 aaKnown RBP23.81■■□□□ 1.4
VPS72-201ENST00000354473 FZD9O00144 591 aa23.8■■□□□ 1.4
VPS72-201ENST00000354473 BRPF1P55201 1214 aaPredicted RBP23.8■■□□□ 1.4
VPS72-201ENST00000354473 FAM161AQ3B820 660 aa23.8■■□□□ 1.4
VPS72-201ENST00000354473 VPS33BQ9H267 617 aa23.8■■□□□ 1.4
VPS72-201ENST00000354473 NOB1Q9ULX3 412 aaKnown RBP23.8■■□□□ 1.4
VPS72-201ENST00000354473 DDNO94850 711 aaPredicted RBP23.79■■□□□ 1.4
VPS72-201ENST00000354473 NIM1KQ8IY84 436 aa23.79■■□□□ 1.4
VPS72-201ENST00000354473 CSF1RP07333 972 aa23.78■■□□□ 1.4
VPS72-201ENST00000354473 ITGA6P23229 1130 aa23.78■■□□□ 1.4
VPS72-201ENST00000354473 FOXO4P98177 505 aa23.78■■□□□ 1.4
VPS72-201ENST00000354473 KIF16BQ96L93 1317 aa23.77■■□□□ 1.4
VPS72-201ENST00000354473 KIAA2012Q0VF49 1180 aa23.77■■□□□ 1.4
VPS72-201ENST00000354473 C16orf71Q8IYS4 520 aaPredicted RBP23.77■■□□□ 1.4
VPS72-201ENST00000354473 ANKIB1Q9P2G1 1089 aa23.77■■□□□ 1.4
VPS72-201ENST00000354473 C6orf229H3BNL8 230 aa23.76■■□□□ 1.39
VPS72-201ENST00000354473 NBPF7P0C2Y1 421 aaPredicted RBP23.76■■□□□ 1.39
VPS72-201ENST00000354473 VEGFAP15692 232 aaPredicted RBP23.76■■□□□ 1.39
VPS72-201ENST00000354473 EIF6P56537 245 aaKnown RBP23.76■■□□□ 1.39
VPS72-201ENST00000354473 EPHA10Q5JZY3 1008 aa23.76■■□□□ 1.39
VPS72-201ENST00000354473 API5Q9BZZ5 524 aaKnown RBP23.76■■□□□ 1.39
VPS72-201ENST00000354473 BSDC1Q9NW68 430 aaPredicted RBP23.76■■□□□ 1.39
VPS72-201ENST00000354473 POLLQ9UGP5 575 aa23.76■■□□□ 1.39
VPS72-201ENST00000354473 CHMP3Q9Y3E7 222 aa23.76■■□□□ 1.39
VPS72-201ENST00000354473 UTYO14607 1347 aa23.75■■□□□ 1.39
VPS72-201ENST00000354473 IGHMBP2P38935 993 aaKnown RBP23.75■■□□□ 1.39
VPS72-201ENST00000354473 PODXL2Q9NZ53 605 aa23.75■■□□□ 1.39
VPS72-201ENST00000354473 POTECB2RU33 542 aa23.74■■□□□ 1.39
VPS72-201ENST00000354473 TOMM70O94826 608 aa23.74■■□□□ 1.39
VPS72-201ENST00000354473 LMBR1LQ6UX01 489 aa23.74■■□□□ 1.39
VPS72-201ENST00000354473 TBC1D16Q8TBP0 767 aa23.74■■□□□ 1.39
VPS72-201ENST00000354473 SUCLG2Q96I99 432 aa23.74■■□□□ 1.39
VPS72-201ENST00000354473 XDHP47989 1333 aa23.73■■□□□ 1.39
VPS72-201ENST00000354473 ANKRD18BA2A2Z9 1011 aa23.73■■□□□ 1.39
VPS72-201ENST00000354473 UFL1O94874 794 aa23.73■■□□□ 1.39
VPS72-201ENST00000354473 IFIT5Q13325 482 aaKnown RBP23.73■■□□□ 1.39
VPS72-201ENST00000354473 WASHC4Q2M389 1173 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms