RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 CHAMP1Q96JM3 812 aa28.44■■■□□ 2.14
USP25-203ENST00000351097 CHMP3Q9Y3E7 222 aa28.44■■■□□ 2.14
USP25-203ENST00000351097 TFCP2Q12800 502 aa28.44■■■□□ 2.14
USP25-203ENST00000351097 GIGYF2Q6Y7W6 1299 aaKnown RBP28.44■■■□□ 2.14
USP25-203ENST00000351097 LSG1Q9H089 658 aaKnown RBP28.43■■■□□ 2.14
USP25-203ENST00000351097 RBM27Q9P2N5 1060 aaKnown RBP28.43■■■□□ 2.14
USP25-203ENST00000351097 C8orf37Q96NL8 207 aa28.43■■■□□ 2.14
USP25-203ENST00000351097 BCL9LQ86UU0 1499 aa28.42■■■□□ 2.14
USP25-203ENST00000351097 HLFQ16534 295 aa28.42■■■□□ 2.14
USP25-203ENST00000351097 A0A0G2JS52 829 aa28.41■■■□□ 2.14
USP25-203ENST00000351097 TNNI3KQ59H18 835 aa28.41■■■□□ 2.14
USP25-203ENST00000351097 FPGT-TNNI3KV9GXZ4 949 aa28.41■■■□□ 2.14
USP25-203ENST00000351097 NGLY1Q96IV0 654 aa28.41■■■□□ 2.14
USP25-203ENST00000351097 SNX14Q9Y5W7 946 aa28.41■■■□□ 2.14
USP25-203ENST00000351097 KIAA1211Q6ZU35 1233 aa28.4■■■□□ 2.14
USP25-203ENST00000351097 EVI5LQ96CN4 794 aa28.4■■■□□ 2.14
USP25-203ENST00000351097 TMEM63CQ9P1W3 806 aa28.4■■■□□ 2.14
USP25-203ENST00000351097 IL6STP40189 918 aaPredicted RBP28.4■■■□□ 2.14
USP25-203ENST00000351097 RBSNQ9H1K0 784 aa28.4■■■□□ 2.14
USP25-203ENST00000351097 PCCAP05165 728 aaPredicted RBP28.39■■■□□ 2.14
USP25-203ENST00000351097 VPS72Q15906 364 aa28.39■■■□□ 2.14
USP25-203ENST00000351097 FAM98CQ17RN3 349 aaKnown RBP28.39■■■□□ 2.14
USP25-203ENST00000351097 ATG9AQ7Z3C6 839 aa28.38■■■□□ 2.13
USP25-203ENST00000351097 DBNLQ9UJU6 430 aaKnown RBP28.38■■■□□ 2.13
USP25-203ENST00000351097 WDR33Q9C0J8 1336 aaKnown RBP28.38■■■□□ 2.13
USP25-203ENST00000351097 LRSAM1Q6UWE0 723 aa28.38■■■□□ 2.13
USP25-203ENST00000351097 CWC27Q6UX04 472 aaKnown RBP28.38■■■□□ 2.13
USP25-203ENST00000351097 FAM89AQ96GI7 184 aa28.38■■■□□ 2.13
USP25-203ENST00000351097 NSFL1CQ9UNZ2 370 aaKnown RBP28.38■■■□□ 2.13
USP25-203ENST00000351097 ZBTB38Q8NAP3 1195 aaPredicted RBP28.37■■■□□ 2.13
USP25-203ENST00000351097 TTC14Q96N46 770 aa28.37■■■□□ 2.13
USP25-203ENST00000351097 BOLA2Q9H3K6 86 aa28.37■■■□□ 2.13
USP25-203ENST00000351097 HSP90AB3PQ58FF7 597 aa28.36■■■□□ 2.13
USP25-203ENST00000351097 NLRP10Q86W26 655 aa28.36■■■□□ 2.13
USP25-203ENST00000351097 DIAPH3Q9NSV4 1193 aa28.36■■■□□ 2.13
USP25-203ENST00000351097 ATP6V1AP38606 617 aa28.35■■■□□ 2.13
USP25-203ENST00000351097 RUFY2Q8WXA3 655 aa28.35■■■□□ 2.13
USP25-203ENST00000351097 LOC102724428A0A0B4J2F2 783 aa28.35■■■□□ 2.13
USP25-203ENST00000351097 GPTP24298 496 aa28.35■■■□□ 2.13
USP25-203ENST00000351097 SIK1P57059 783 aa28.35■■■□□ 2.13
USP25-203ENST00000351097 FNBP4Q8N3X1 1017 aaPredicted RBP28.35■■■□□ 2.13
USP25-203ENST00000351097 PLA2G12BQ9BX93 195 aa28.35■■■□□ 2.13
USP25-203ENST00000351097 INTS5Q6P9B9 1019 aaKnown RBP28.34■■■□□ 2.13
USP25-203ENST00000351097 DZIP3Q86Y13 1208 aaKnown RBP28.34■■■□□ 2.13
USP25-203ENST00000351097 RASEFQ8IZ41 740 aa28.34■■■□□ 2.13
USP25-203ENST00000351097 ZNF594Q96JF6 807 aaPredicted RBP28.34■■■□□ 2.13
USP25-203ENST00000351097 TBC1D2BQ9UPU7 963 aa28.34■■■□□ 2.13
USP25-203ENST00000351097 SYCE3A1L190 88 aa28.34■■■□□ 2.13
USP25-203ENST00000351097 ERVV-1B6SEH8 477 aa28.34■■■□□ 2.13
USP25-203ENST00000351097 NAP1L5Q96NT1 182 aaPredicted RBP28.34■■■□□ 2.13
USP25-203ENST00000351097 KCNQ2O43526 872 aa28.33■■■□□ 2.13
USP25-203ENST00000351097 IL15P40933 162 aaPredicted RBP28.33■■■□□ 2.13
USP25-203ENST00000351097 PALLDQ8WX93 1383 aa28.33■■■□□ 2.13
USP25-203ENST00000351097 EYA2O00167 538 aa28.33■■■□□ 2.12
USP25-203ENST00000351097 EIF5P55010 431 aaKnown RBP28.33■■■□□ 2.12
USP25-203ENST00000351097 DBNDD2Q9BQY9 259 aa28.33■■■□□ 2.12
USP25-203ENST00000351097 ATP5JP18859 108 aa28.32■■■□□ 2.12
USP25-203ENST00000351097 AK2P54819 239 aa28.32■■■□□ 2.12
USP25-203ENST00000351097 ITPK1Q13572 414 aa28.32■■■□□ 2.12
USP25-203ENST00000351097 LRRC24Q50LG9 513 aa28.32■■■□□ 2.12
USP25-203ENST00000351097 ZSCAN30Q86W11 494 aa28.32■■■□□ 2.12
USP25-203ENST00000351097 CCDC87Q9NVE4 849 aa28.32■■■□□ 2.12
USP25-203ENST00000351097 CDHR2Q9BYE9 1310 aa28.32■■■□□ 2.12
USP25-203ENST00000351097 CRKLP46109 303 aaKnown RBP28.31■■■□□ 2.12
USP25-203ENST00000351097 SYNE4Q8N205 404 aa28.31■■■□□ 2.12
USP25-203ENST00000351097 LIMCH1Q9UPQ0 1083 aa28.31■■■□□ 2.12
USP25-203ENST00000351097 RPAP1Q9BWH6 1393 aaPredicted RBP28.31■■■□□ 2.12
USP25-203ENST00000351097 CSF1RP07333 972 aa28.31■■■□□ 2.12
USP25-203ENST00000351097 CIAO1O76071 339 aa28.3■■■□□ 2.12
USP25-203ENST00000351097 PDLIM2Q96JY6 352 aa28.3■■■□□ 2.12
USP25-203ENST00000351097 ANKRD36CQ5JPF3 1778 aa28.3■■■□□ 2.12
USP25-203ENST00000351097 SPATA31A6Q5VVP1 1343 aa28.3■■■□□ 2.12
USP25-203ENST00000351097 CCDC57Q2TAC2 916 aa28.3■■■□□ 2.12
USP25-203ENST00000351097 HS1BP3Q53T59 392 aa28.3■■■□□ 2.12
USP25-203ENST00000351097 SYAP1Q96A49 352 aaPredicted RBP28.3■■■□□ 2.12
USP25-203ENST00000351097 GPR108Q9NPR9 543 aa28.3■■■□□ 2.12
USP25-203ENST00000351097 CICQ96RK0 1608 aaPredicted RBP28.29■■■□□ 2.12
USP25-203ENST00000351097 RUFY3Q7L099 469 aa28.29■■■□□ 2.12
USP25-203ENST00000351097 PUS3Q9BZE2 481 aaKnown RBP28.29■■■□□ 2.12
USP25-203ENST00000351097 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.28■■■□□ 2.12
USP25-203ENST00000351097 HIP1O00291 1037 aa28.28■■■□□ 2.12
USP25-203ENST00000351097 NUP98P52948 1817 aa28.27■■■□□ 2.12
USP25-203ENST00000351097 SMARCC1Q92922 1105 aaPredicted RBP28.27■■■□□ 2.12
USP25-203ENST00000351097 CCDC85AQ96PX6 553 aaPredicted RBP28.27■■■□□ 2.12
USP25-203ENST00000351097 FSD1Q9BTV5 496 aa28.27■■■□□ 2.12
USP25-203ENST00000351097 CASTP20810 708 aaKnown RBP28.27■■■□□ 2.12
USP25-203ENST00000351097 ZNF34Q8IZ26 560 aa28.27■■■□□ 2.12
USP25-203ENST00000351097 FAM227BQ96M60 508 aa28.27■■■□□ 2.12
USP25-203ENST00000351097 UBN2Q6ZU65 1347 aa28.27■■■□□ 2.12
USP25-203ENST00000351097 RREB1Q92766 1687 aa28.26■■■□□ 2.12
USP25-203ENST00000351097 EDC3Q96F86 508 aaKnown RBP28.26■■■□□ 2.11
USP25-203ENST00000351097 USP21Q9UK80 565 aa28.26■■■□□ 2.11
USP25-203ENST00000351097 PTH1RQ03431 593 aa28.26■■■□□ 2.11
USP25-203ENST00000351097 NMIQ13287 307 aaPredicted RBP28.26■■■□□ 2.11
USP25-203ENST00000351097 KCNB2Q92953 911 aa28.26■■■□□ 2.11
USP25-203ENST00000351097 TRMT112Q9UI30 125 aaKnown RBP28.26■■■□□ 2.11
USP25-203ENST00000351097 TIMM10P62072 90 aa28.25■■■□□ 2.11
USP25-203ENST00000351097 FOXD4L6Q3SYB3 417 aaPredicted RBP28.25■■■□□ 2.11
USP25-203ENST00000351097 FOXD4L3Q6VB84 417 aaPredicted RBP28.25■■■□□ 2.11
USP25-203ENST00000351097 USP48Q86UV5 1035 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms