RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 STK38Q15208 465 aa14.29□□□□□ -0.12
SMAD9-201ENST00000350148 BEND3Q5T5X7 828 aa14.29□□□□□ -0.12
SMAD9-201ENST00000350148 MTERF4Q7Z6M4 381 aaKnown RBP14.29□□□□□ -0.12
SMAD9-201ENST00000350148 NEURL1BA8MQ27 555 aa14.28□□□□□ -0.12
SMAD9-201ENST00000350148 PRPF40AO75400 957 aaKnown RBP14.28□□□□□ -0.12
SMAD9-201ENST00000350148 TPM1P09493 284 aa14.28□□□□□ -0.12
SMAD9-201ENST00000350148 CCDC178Q5BJE1 867 aa14.28□□□□□ -0.12
SMAD9-201ENST00000350148 GNAT2P19087 354 aa14.28□□□□□ -0.12
SMAD9-201ENST00000350148 TCIRG1Q13488 830 aa14.28□□□□□ -0.12
SMAD9-201ENST00000350148 BAG3O95817 575 aa14.28□□□□□ -0.12
SMAD9-201ENST00000350148 DHX8Q14562 1220 aaKnown RBP14.28□□□□□ -0.12
SMAD9-201ENST00000350148 NEK1Q96PY6 1258 aa14.28□□□□□ -0.12
SMAD9-201ENST00000350148 PAG1Q9NWQ8 432 aa14.28□□□□□ -0.12
SMAD9-201ENST00000350148 RRP9O43818 475 aaKnown RBP14.28□□□□□ -0.12
SMAD9-201ENST00000350148 CHMLP26374 656 aa14.28□□□□□ -0.12
SMAD9-201ENST00000350148 HELLSQ9NRZ9 838 aa14.28□□□□□ -0.12
SMAD9-201ENST00000350148 RBM25P49756 843 aaKnown RBP14.27□□□□□ -0.12
SMAD9-201ENST00000350148 TMOD2Q9NZR1 351 aa14.27□□□□□ -0.12
SMAD9-201ENST00000350148 USP44Q9H0E7 712 aa14.27□□□□□ -0.13
SMAD9-201ENST00000350148 PA2G4Q9UQ80 394 aaKnown RBP14.27□□□□□ -0.13
SMAD9-201ENST00000350148 TXLNAP40222 546 aa14.27□□□□□ -0.13
SMAD9-201ENST00000350148 PRIM1P49642 420 aaKnown RBP14.27□□□□□ -0.13
SMAD9-201ENST00000350148 NCOA7Q8NI08 942 aa14.27□□□□□ -0.13
SMAD9-201ENST00000350148 RNF113AO15541 343 aaKnown RBP14.26□□□□□ -0.13
SMAD9-201ENST00000350148 VPS53Q5VIR6 699 aa14.26□□□□□ -0.13
SMAD9-201ENST00000350148 DNAJC10Q8IXB1 793 aa14.26□□□□□ -0.13
SMAD9-201ENST00000350148 USP21Q9UK80 565 aa14.26□□□□□ -0.13
SMAD9-201ENST00000350148 TFCP2Q12800 502 aa14.26□□□□□ -0.13
SMAD9-201ENST00000350148 IQCA1Q86XH1 822 aa14.26□□□□□ -0.13
SMAD9-201ENST00000350148 C16orf71Q8IYS4 520 aaPredicted RBP14.26□□□□□ -0.13
SMAD9-201ENST00000350148 SUCLG2Q96I99 432 aa14.26□□□□□ -0.13
SMAD9-201ENST00000350148 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
SMAD9-201ENST00000350148 USP5P45974 858 aa14.26□□□□□ -0.13
SMAD9-201ENST00000350148 STK3Q13188 491 aa14.26□□□□□ -0.13
SMAD9-201ENST00000350148 UPF3BQ9BZI7 483 aaKnown RBP14.26□□□□□ -0.13
SMAD9-201ENST00000350148 SCAND2PQ9GZW5 306 aaPredicted RBP14.26□□□□□ -0.13
SMAD9-201ENST00000350148 TSPY26PQ9H489 355 aa14.26□□□□□ -0.13
SMAD9-201ENST00000350148 TNNI3KQ59H18 835 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 PPP4R3BQ5MIZ7 849 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 TRAPPC3LQ5T215 181 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 OLFM4Q6UX06 510 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 FPGT-TNNI3KV9GXZ4 949 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 SSH2Q76I76 1423 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 SDF4Q9BRK5 362 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 CEP131Q9UPN4 1083 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 CCDC66A2RUB6 948 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 TMTC2Q8N394 836 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 A1BGP04217 495 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 KRT23Q9C075 422 aa14.25□□□□□ -0.13
SMAD9-201ENST00000350148 CCDC83Q8IWF9 413 aa14.24□□□□□ -0.13
SMAD9-201ENST00000350148 CRNKL1Q9BZJ0 848 aaKnown RBP14.24□□□□□ -0.13
SMAD9-201ENST00000350148 CCNL1Q9UK58 526 aaPredicted RBP14.24□□□□□ -0.13
SMAD9-201ENST00000350148 RBM8AQ9Y5S9 174 aaKnown RBP14.24□□□□□ -0.13
SMAD9-201ENST00000350148 IBTKQ9P2D0 1353 aaPredicted RBP14.24□□□□□ -0.13
SMAD9-201ENST00000350148 FIBPO43427 364 aa14.24□□□□□ -0.13
SMAD9-201ENST00000350148 RAD21O60216 631 aa14.24□□□□□ -0.13
SMAD9-201ENST00000350148 NOM1Q5C9Z4 860 aaKnown RBP14.24□□□□□ -0.13
SMAD9-201ENST00000350148 JARID2Q92833 1246 aaPredicted RBP14.24□□□□□ -0.13
SMAD9-201ENST00000350148 TSR1Q2NL82 804 aaKnown RBP14.24□□□□□ -0.13
SMAD9-201ENST00000350148 SOGA3Q5TF21 947 aa14.24□□□□□ -0.13
SMAD9-201ENST00000350148 CAVIN1Q6NZI2 390 aaKnown RBP14.24□□□□□ -0.13
SMAD9-201ENST00000350148 USP26Q9BXU7 913 aa14.24□□□□□ -0.13
SMAD9-201ENST00000350148 HEG1Q9ULI3 1381 aa14.24□□□□□ -0.13
SMAD9-201ENST00000350148 KIF20BQ96Q89 1820 aa14.24□□□□□ -0.13
SMAD9-201ENST00000350148 KCNQ3O43525 872 aa14.24□□□□□ -0.13
SMAD9-201ENST00000350148 PCCAP05165 728 aaPredicted RBP14.24□□□□□ -0.13
SMAD9-201ENST00000350148 NBPF7P0C2Y1 421 aaPredicted RBP14.24□□□□□ -0.13
SMAD9-201ENST00000350148 MCM5P33992 734 aa14.24□□□□□ -0.13
SMAD9-201ENST00000350148 MROH5Q6ZUA9 1318 aa14.23□□□□□ -0.13
SMAD9-201ENST00000350148 PIP4K2AP48426 406 aaPredicted RBP14.23□□□□□ -0.13
SMAD9-201ENST00000350148 ZNF804AQ7Z570 1209 aa14.23□□□□□ -0.13
SMAD9-201ENST00000350148 SPATA32Q96LK8 384 aa14.23□□□□□ -0.13
SMAD9-201ENST00000350148 FOSBP53539 338 aa14.23□□□□□ -0.13
SMAD9-201ENST00000350148 RRAGDQ9NQL2 400 aaPredicted RBP14.23□□□□□ -0.13
SMAD9-201ENST00000350148 IL6STP40189 918 aaPredicted RBP14.23□□□□□ -0.13
SMAD9-201ENST00000350148 NMIQ13287 307 aaPredicted RBP14.23□□□□□ -0.13
SMAD9-201ENST00000350148 TCEAL9Q9UHQ7 104 aa14.23□□□□□ -0.13
SMAD9-201ENST00000350148 POLR3DP05423 398 aaPredicted RBP14.23□□□□□ -0.13
SMAD9-201ENST00000350148 PUM3Q15397 648 aaKnown RBP14.23□□□□□ -0.13
SMAD9-201ENST00000350148 TSHZ3Q63HK5 1081 aa14.23□□□□□ -0.13
SMAD9-201ENST00000350148 INTS4Q96HW7 963 aaKnown RBP14.23□□□□□ -0.13
SMAD9-201ENST00000350148 R3HCC1Q9Y3T6 440 aaKnown RBP14.23□□□□□ -0.13
SMAD9-201ENST00000350148 PDE4BQ07343 736 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 TICAM2Q86XR7 235 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 CERS3Q8IU89 383 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 NUP133Q8WUM0 1156 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 GPR108Q9NPR9 543 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 CCDC192P0DO97 292 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 IFT172Q9UG01 1749 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.22□□□□□ -0.13
SMAD9-201ENST00000350148 BCL11BQ9C0K0 894 aaPredicted RBP14.22□□□□□ -0.13
SMAD9-201ENST00000350148 SLC12A7Q9Y666 1083 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 SSFA2P28290 1259 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 NASPP49321 788 aaPredicted RBP14.22□□□□□ -0.13
SMAD9-201ENST00000350148 OSBPL3Q9H4L5 887 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 DACH1Q9UI36 760 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 USP16Q9Y5T5 823 aa14.22□□□□□ -0.13
SMAD9-201ENST00000350148 MAP3K15Q6ZN16 1313 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms