RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 BORCS6Q96GS4 357 aa12.43□□□□□ -0.42
CAPN3-203ENST00000349748 ANO2Q9NQ90 1003 aa12.43□□□□□ -0.42
CAPN3-203ENST00000349748 AKAP2Q9Y2D5 859 aa12.43□□□□□ -0.42
CAPN3-203ENST00000349748 TMEM131LA2VDJ0 1609 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 FANCGO15287 622 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 GNAI3P08754 354 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 PAX7P23759 505 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 CDC25BP30305 580 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 MCM6Q14566 821 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 FAM173BQ6P4H8 233 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 JMYQ8N9B5 988 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 FAXDC2Q96IV6 333 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 RGS12O14924 1447 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 FAN1Q9Y2M0 1017 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 ERLIN2O94905 339 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 TTC6Q86TZ1 520 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 NEXMIFQ5QGS0 1516 aa12.42□□□□□ -0.42
CAPN3-203ENST00000349748 ABCC11Q96J66 1382 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 A0A087WUV0 522 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-203ENST00000349748 A0A087WWV3 80 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 PHACTR2O75167 634 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 RPS6KA5O75582 802 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 IFIT2P09913 472 aaKnown RBP12.41□□□□□ -0.42
CAPN3-203ENST00000349748 TRDNQ13061 729 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 C11orf91Q3C1V1 193 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 WAPLQ7Z5K2 1190 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 H0YHG0 523 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 GOLGA6L19H0YKK7 550 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 SARNPP82979 210 aaKnown RBP12.41□□□□□ -0.42
CAPN3-203ENST00000349748 LONRF2Q1L5Z9 754 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 MIEF2Q96C03 454 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 PARD6BQ9BYG5 372 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 BICC1Q9H694 974 aaKnown RBP12.41□□□□□ -0.42
CAPN3-203ENST00000349748 MKRN1Q9UHC7 482 aaKnown RBP12.41□□□□□ -0.42
CAPN3-203ENST00000349748 ATP6V1DQ9Y5K8 247 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 MED14O60244 1454 aa12.41□□□□□ -0.42
CAPN3-203ENST00000349748 ADGRB1O14514 1584 aa12.4□□□□□ -0.42
CAPN3-203ENST00000349748 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-203ENST00000349748 EFCAB8A8MWE9 144 aa12.4□□□□□ -0.42
CAPN3-203ENST00000349748 DHX8Q14562 1220 aaKnown RBP12.4□□□□□ -0.42
CAPN3-203ENST00000349748 GIMAP7Q8NHV1 300 aa12.4□□□□□ -0.42
CAPN3-203ENST00000349748 PRAM1Q96QH2 718 aa12.4□□□□□ -0.42
CAPN3-203ENST00000349748 MINK1Q8N4C8 1332 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-203ENST00000349748 GBP6Q6ZN66 633 aa12.4□□□□□ -0.42
CAPN3-203ENST00000349748 MRFAP1L1Q96HT8 127 aa12.4□□□□□ -0.42
CAPN3-203ENST00000349748 IBSPP21815 317 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-203ENST00000349748 RBM28Q9NW13 759 aaKnown RBP12.39□□□□□ -0.43
CAPN3-203ENST00000349748 TMPOP42166 694 aaKnown RBP12.39□□□□□ -0.43
CAPN3-203ENST00000349748 APOBRQ0VD83 1088 aa12.39□□□□□ -0.43
CAPN3-203ENST00000349748 WWC2Q6AWC2 1192 aa12.39□□□□□ -0.43
CAPN3-203ENST00000349748 C11orf57Q6ZUT1 292 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-203ENST00000349748 FERMT3Q86UX7 667 aa12.39□□□□□ -0.43
CAPN3-203ENST00000349748 SMC3Q9UQE7 1217 aa12.39□□□□□ -0.43
CAPN3-203ENST00000349748 SETBP1Q9Y6X0 1596 aa12.39□□□□□ -0.43
CAPN3-203ENST00000349748 ELL2O00472 640 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-203ENST00000349748 ETF1P62495 437 aaKnown RBP12.39□□□□□ -0.43
CAPN3-203ENST00000349748 OS9Q13438 667 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-203ENST00000349748 FAM177A1Q8N128 213 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-203ENST00000349748 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
CAPN3-203ENST00000349748 ESYT1Q9BSJ8 1104 aa12.39□□□□□ -0.43
CAPN3-203ENST00000349748 MTMR6Q9Y217 621 aa12.39□□□□□ -0.43
CAPN3-203ENST00000349748 KLHL33A6NCF5 533 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 ANKLE2Q86XL3 938 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 KCND1Q9NSA2 647 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 GNL3LQ9NVN8 582 aaKnown RBP12.38□□□□□ -0.43
CAPN3-203ENST00000349748 NCKAP5LQ9HCH0 1330 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 METP08581 1390 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 MPHOSPH10O00566 681 aaKnown RBP12.38□□□□□ -0.43
CAPN3-203ENST00000349748 IQCB1Q15051 598 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 CFAP53Q96M91 514 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 CLIC6Q96NY7 704 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 SUGCTQ9HAC7 445 aa12.38□□□□□ -0.43
CAPN3-203ENST00000349748 USP32Q8NFA0 1604 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 NR1I2O75469 434 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 GNAI1P63096 354 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 LRRFIP1Q32MZ4 808 aaKnown RBP12.37□□□□□ -0.43
CAPN3-203ENST00000349748 ADGRB2O60241 1585 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 PPLO60437 1756 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 EXOC5O00471 708 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 ELF1P32519 619 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 SCRN1Q12765 414 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 ALDH1L2Q3SY69 923 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
CAPN3-203ENST00000349748 GPR161Q8N6U8 529 aaKnown RBP12.37□□□□□ -0.43
CAPN3-203ENST00000349748 N4BP2L2Q92802 583 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-203ENST00000349748 PARP3Q9Y6F1 533 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
CAPN3-203ENST00000349748 NUTM2FA1L443 756 aa12.36□□□□□ -0.43
CAPN3-203ENST00000349748 MAP2K7O14733 419 aa12.36□□□□□ -0.43
CAPN3-203ENST00000349748 CALRP27797 417 aaKnown RBP12.36□□□□□ -0.43
CAPN3-203ENST00000349748 SARM1Q6SZW1 724 aa12.36□□□□□ -0.43
CAPN3-203ENST00000349748 FBXW7Q969H0 707 aa12.36□□□□□ -0.43
CAPN3-203ENST00000349748 TULP4Q9NRJ4 1543 aa12.36□□□□□ -0.43
CAPN3-203ENST00000349748 SETD1BQ9UPS6 1966 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms