RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 AOX1Q06278 1338 aa17.78■□□□□ 0.44
PTBP1-201ENST00000349038 APPP05067 770 aa17.78■□□□□ 0.44
PTBP1-201ENST00000349038 EIF2S2P20042 333 aaKnown RBP17.78■□□□□ 0.44
PTBP1-201ENST00000349038 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
PTBP1-201ENST00000349038 MCM6Q14566 821 aa17.77■□□□□ 0.44
PTBP1-201ENST00000349038 SDF4Q9BRK5 362 aa17.77■□□□□ 0.44
PTBP1-201ENST00000349038 JAK2O60674 1132 aa17.77■□□□□ 0.43
PTBP1-201ENST00000349038 PLA2G4AP47712 749 aa17.77■□□□□ 0.43
PTBP1-201ENST00000349038 STK11IPQ8N1F8 1099 aa17.77■□□□□ 0.43
PTBP1-201ENST00000349038 TTC21BQ7Z4L5 1316 aa17.76■□□□□ 0.43
PTBP1-201ENST00000349038 MYO1CO00159 1063 aa17.76■□□□□ 0.43
PTBP1-201ENST00000349038 GNAI3P08754 354 aa17.76■□□□□ 0.43
PTBP1-201ENST00000349038 HSP90AB2PQ58FF8 381 aa17.76■□□□□ 0.43
PTBP1-201ENST00000349038 SECISBP2LQ93073 1101 aaKnown RBP17.76■□□□□ 0.43
PTBP1-201ENST00000349038 ARGLU1Q9NWB6 273 aaPredicted RBP17.76■□□□□ 0.43
PTBP1-201ENST00000349038 XRN1Q8IZH2 1706 aaKnown RBP17.76■□□□□ 0.43
PTBP1-201ENST00000349038 NALCNQ8IZF0 1738 aa17.76■□□□□ 0.43
PTBP1-201ENST00000349038 TTLL5Q6EMB2 1281 aa17.76■□□□□ 0.43
PTBP1-201ENST00000349038 RABEP2Q9H5N1 569 aa17.75■□□□□ 0.43
PTBP1-201ENST00000349038 TPCN1Q9ULQ1 816 aa17.75■□□□□ 0.43
PTBP1-201ENST00000349038 GPS2Q13227 327 aa17.75■□□□□ 0.43
PTBP1-201ENST00000349038 FHOD1Q9Y613 1164 aa17.75■□□□□ 0.43
PTBP1-201ENST00000349038 SRGAP3O43295 1099 aa17.75■□□□□ 0.43
PTBP1-201ENST00000349038 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.75■□□□□ 0.43
PTBP1-201ENST00000349038 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
PTBP1-201ENST00000349038 EP400NLQ6ZTU2 488 aa17.74■□□□□ 0.43
PTBP1-201ENST00000349038 PLA2G4DQ86XP0 818 aa17.74■□□□□ 0.43
PTBP1-201ENST00000349038 CCDC171Q6TFL3 1326 aa17.74■□□□□ 0.43
PTBP1-201ENST00000349038 USP31Q70CQ4 1352 aa17.74■□□□□ 0.43
PTBP1-201ENST00000349038 TPM4P67936 248 aa17.74■□□□□ 0.43
PTBP1-201ENST00000349038 MTHFSDQ2M296 383 aaKnown RBP17.74■□□□□ 0.43
PTBP1-201ENST00000349038 LEO1Q8WVC0 666 aaPredicted RBP17.74■□□□□ 0.43
PTBP1-201ENST00000349038 HYPKQ9NX55 129 aa17.74■□□□□ 0.43
PTBP1-201ENST00000349038 UBTFL1P0CB47 393 aaPredicted RBP17.73■□□□□ 0.43
PTBP1-201ENST00000349038 SRRTQ9BXP5 876 aaKnown RBP17.73■□□□□ 0.43
PTBP1-201ENST00000349038 MAP3K19Q56UN5 1328 aa17.73■□□□□ 0.43
PTBP1-201ENST00000349038 ME1P48163 572 aa17.73■□□□□ 0.43
PTBP1-201ENST00000349038 FLIIQ13045 1269 aa17.73■□□□□ 0.43
PTBP1-201ENST00000349038 FAM208AQ9UK61 1670 aaKnown RBP17.73■□□□□ 0.43
PTBP1-201ENST00000349038 ANXA1P04083 346 aa17.73■□□□□ 0.43
PTBP1-201ENST00000349038 LMOD1P29536 600 aaPredicted RBP17.73■□□□□ 0.43
PTBP1-201ENST00000349038 PDILTQ8N807 584 aa17.73■□□□□ 0.43
PTBP1-201ENST00000349038 TTC14Q96N46 770 aa17.73■□□□□ 0.43
PTBP1-201ENST00000349038 IFNKQ9P0W0 207 aa17.73■□□□□ 0.43
PTBP1-201ENST00000349038 SFPQP23246 707 aaKnown RBP eCLIP17.72■□□□□ 0.434e-7■■□□□ 12.7
PTBP1-201ENST00000349038 CNTROBQ8N137 903 aa17.72■□□□□ 0.43
PTBP1-201ENST00000349038 N4BP2Q86UW6 1770 aaPredicted RBP17.72■□□□□ 0.43
PTBP1-201ENST00000349038 KLHL34Q8N239 644 aa17.72■□□□□ 0.43
PTBP1-201ENST00000349038 PGBD1Q96JS3 809 aa17.72■□□□□ 0.43
PTBP1-201ENST00000349038 SGSM2O43147 1006 aa17.71■□□□□ 0.43
PTBP1-201ENST00000349038 VPS18Q9P253 973 aa17.71■□□□□ 0.43
PTBP1-201ENST00000349038 KINO60870 393 aaKnown RBP17.71■□□□□ 0.43
PTBP1-201ENST00000349038 EVCP57679 992 aa17.71■□□□□ 0.43
PTBP1-201ENST00000349038 SMC1AQ14683 1233 aaKnown RBP17.71■□□□□ 0.43
PTBP1-201ENST00000349038 WWC2Q6AWC2 1192 aa17.71■□□□□ 0.43
PTBP1-201ENST00000349038 PPP1R42Q7Z4L9 355 aa17.71■□□□□ 0.43
PTBP1-201ENST00000349038 CCAR1Q8IX12 1150 aaKnown RBP17.71■□□□□ 0.43
PTBP1-201ENST00000349038 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
PTBP1-201ENST00000349038 TOPAZ1Q8N9V7 1692 aa17.71■□□□□ 0.43
PTBP1-201ENST00000349038 KDRP35968 1356 aa17.71■□□□□ 0.43
PTBP1-201ENST00000349038 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.71■□□□□ 0.423e-9■■□□□ 11.7
PTBP1-201ENST00000349038 TAF6LQ9Y6J9 622 aa17.71■□□□□ 0.42
PTBP1-201ENST00000349038 LRRC37A3O60309 1634 aa17.7■□□□□ 0.42
PTBP1-201ENST00000349038 TULP2O00295 520 aa17.7■□□□□ 0.42
PTBP1-201ENST00000349038 CCDC73Q6ZRK6 1079 aa17.7■□□□□ 0.42
PTBP1-201ENST00000349038 DHX37Q8IY37 1157 aaKnown RBP17.7■□□□□ 0.42
PTBP1-201ENST00000349038 CLSTN2Q9H4D0 955 aa17.7■□□□□ 0.42
PTBP1-201ENST00000349038 PXDNLA1KZ92 1463 aa17.7■□□□□ 0.42
PTBP1-201ENST00000349038 DHX16O60231 1041 aaKnown RBP17.7■□□□□ 0.42
PTBP1-201ENST00000349038 UTP14AQ9BVJ6 771 aaKnown RBP17.7■□□□□ 0.42
PTBP1-201ENST00000349038 DDX19AQ9NUU7 478 aaKnown RBP17.7■□□□□ 0.42
PTBP1-201ENST00000349038 SETD1BQ9UPS6 1966 aaKnown RBP17.7■□□□□ 0.42
PTBP1-201ENST00000349038 SOS1Q07889 1333 aaPredicted RBP17.69■□□□□ 0.42
PTBP1-201ENST00000349038 RGS22Q8NE09 1264 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 USP6P35125 1406 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 CCZ1BP86790 482 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 CCZ1P86791 482 aaPredicted RBP17.69■□□□□ 0.42
PTBP1-201ENST00000349038 SYCP1Q15431 976 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 BRF1Q92994 677 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 PPP1R13BQ96KQ4 1090 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 SCAND2PQ9GZW5 306 aaPredicted RBP17.69■□□□□ 0.42
PTBP1-201ENST00000349038 ACEP12821 1306 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 NRDCO43847 1150 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 FOXR1Q6PIV2 292 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 TDRD7Q8NHU6 1098 aaKnown RBP17.69■□□□□ 0.42
PTBP1-201ENST00000349038 PI4K2BQ8TCG2 481 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 SSH3Q8TE77 659 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 KIF1BPQ96EK5 621 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 NDUFB9Q9Y6M9 179 aa17.69■□□□□ 0.42
PTBP1-201ENST00000349038 PLEKHG3A1L390 1219 aa17.68■□□□□ 0.42
PTBP1-201ENST00000349038 SF3A1Q15459 793 aaKnown RBP17.68■□□□□ 0.42
PTBP1-201ENST00000349038 TXLNBQ8N3L3 684 aa17.68■□□□□ 0.42
PTBP1-201ENST00000349038 LTV1Q96GA3 475 aaPredicted RBP17.68■□□□□ 0.42
PTBP1-201ENST00000349038 XPO4Q9C0E2 1151 aaKnown RBP17.68■□□□□ 0.42
PTBP1-201ENST00000349038 LSG1Q9H089 658 aaKnown RBP17.68■□□□□ 0.42
PTBP1-201ENST00000349038 PRR29P0C7W0 189 aa17.68■□□□□ 0.42
PTBP1-201ENST00000349038 CCT2P78371 535 aaKnown RBP17.68■□□□□ 0.42
PTBP1-201ENST00000349038 ST3GAL1Q11201 340 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms