RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 NMRK2Q9NPI5 230 aa20.05■□□□□ 0.8
TSPAN4-201ENST00000346501 CDHR2Q9BYE9 1310 aa20.04■□□□□ 0.8
TSPAN4-201ENST00000346501 IGKV5-2P06315 115 aa20.04■□□□□ 0.8
TSPAN4-201ENST00000346501 VEGFAP15692 232 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-201ENST00000346501 CWF19L2Q2TBE0 894 aaKnown RBP20.04■□□□□ 0.8
TSPAN4-201ENST00000346501 DPP8Q6V1X1 898 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-201ENST00000346501 LARGE2Q8N3Y3 721 aa20.04■□□□□ 0.8
TSPAN4-201ENST00000346501 MPNDQ8N594 471 aa20.04■□□□□ 0.8
TSPAN4-201ENST00000346501 VPS33BQ9H267 617 aa20.04■□□□□ 0.8
TSPAN4-201ENST00000346501 RRAGCQ9HB90 399 aa20.04■□□□□ 0.8
TSPAN4-201ENST00000346501 KIF3CO14782 793 aa20.03■□□□□ 0.8
TSPAN4-201ENST00000346501 TOMM70O94826 608 aa20.03■□□□□ 0.8
TSPAN4-201ENST00000346501 CT47B1P0C2W7 299 aaPredicted RBP20.02■□□□□ 0.8
TSPAN4-201ENST00000346501 EIF6P56537 245 aaKnown RBP20.02■□□□□ 0.8
TSPAN4-201ENST00000346501 RPS8P62241 208 aaKnown RBP20.02■□□□□ 0.8
TSPAN4-201ENST00000346501 UBE3BQ7Z3V4 1068 aa20.02■□□□□ 0.8
TSPAN4-201ENST00000346501 DICER1Q9UPY3 1922 aaKnown RBP20.02■□□□□ 0.79
TSPAN4-201ENST00000346501 TIAM2Q8IVF5 1701 aa20.02■□□□□ 0.79
TSPAN4-201ENST00000346501 PPIP5K2O43314 1243 aa20.01■□□□□ 0.79
TSPAN4-201ENST00000346501 GCKRQ14397 625 aa20.01■□□□□ 0.79
TSPAN4-201ENST00000346501 NIM1KQ8IY84 436 aa20.01■□□□□ 0.79
TSPAN4-201ENST00000346501 JARID2Q92833 1246 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-201ENST00000346501 CDC5LQ99459 802 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-201ENST00000346501 LAMB2P55268 1798 aa20■□□□□ 0.79
TSPAN4-201ENST00000346501 DDX60Q8IY21 1712 aaKnown RBP20■□□□□ 0.79
TSPAN4-201ENST00000346501 CTSWP56202 376 aa20■□□□□ 0.79
TSPAN4-201ENST00000346501 SLC4A10Q6U841 1118 aa20■□□□□ 0.79
TSPAN4-201ENST00000346501 ANKRD18AQ8IVF6 992 aa20■□□□□ 0.79
TSPAN4-201ENST00000346501 CDCA7LQ96GN5 454 aa20■□□□□ 0.79
TSPAN4-201ENST00000346501 IQCA1LA6NCM1 817 aa19.99■□□□□ 0.79
TSPAN4-201ENST00000346501 F6X3S4 739 aa19.99■□□□□ 0.79
TSPAN4-201ENST00000346501 H7C1W4 665 aa19.99■□□□□ 0.79
TSPAN4-201ENST00000346501 ALDH1L2Q3SY69 923 aa19.99■□□□□ 0.79
TSPAN4-201ENST00000346501 CELF1Q92879 486 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-201ENST00000346501 NSFL1CQ9UNZ2 370 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-201ENST00000346501 PTPRCP08575 1304 aa19.99■□□□□ 0.79
TSPAN4-201ENST00000346501 HNRNPUQ00839 825 aaKnown RBP eCLIP19.98■□□□□ 0.79
TSPAN4-201ENST00000346501 RBM46Q8TBY0 533 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-201ENST00000346501 CCDC85AQ96PX6 553 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-201ENST00000346501 SRCIN1Q9C0H9 1055 aa19.98■□□□□ 0.79
TSPAN4-201ENST00000346501 C9orf78Q9NZ63 289 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-201ENST00000346501 ALDH1L1O75891 902 aa19.97■□□□□ 0.79
TSPAN4-201ENST00000346501 DDNO94850 711 aaPredicted RBP19.97■□□□□ 0.79
TSPAN4-201ENST00000346501 EYA3Q99504 573 aa19.97■□□□□ 0.79
TSPAN4-201ENST00000346501 RTFDC1Q9BY42 306 aaPredicted RBP19.97■□□□□ 0.79
TSPAN4-201ENST00000346501 SMC4Q9NTJ3 1288 aa19.97■□□□□ 0.79
TSPAN4-201ENST00000346501 C6orf229H3BNL8 230 aa19.96■□□□□ 0.79
TSPAN4-201ENST00000346501 FZD9O00144 591 aa19.96■□□□□ 0.79
TSPAN4-201ENST00000346501 BEND3Q5T5X7 828 aa19.96■□□□□ 0.79
TSPAN4-201ENST00000346501 MRPL50Q8N5N7 158 aaKnown RBP19.96■□□□□ 0.79
TSPAN4-201ENST00000346501 SEC31BQ9NQW1 1179 aa19.96■□□□□ 0.79
TSPAN4-201ENST00000346501 ANKIB1Q9P2G1 1089 aa19.96■□□□□ 0.79
TSPAN4-201ENST00000346501 SNED1Q8TER0 1413 aa19.95■□□□□ 0.78
TSPAN4-201ENST00000346501 G3V3G9 751 aa19.95■□□□□ 0.78
TSPAN4-201ENST00000346501 IGHMBP2P38935 993 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-201ENST00000346501 AOC3Q16853 763 aa19.95■□□□□ 0.78
TSPAN4-201ENST00000346501 DCAF8Q5TAQ9 597 aa19.95■□□□□ 0.78
TSPAN4-201ENST00000346501 TRMT2AQ8IZ69 625 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-201ENST00000346501 GPC2Q8N158 579 aa19.95■□□□□ 0.78
TSPAN4-201ENST00000346501 TTLL11Q8NHH1 800 aa19.95■□□□□ 0.78
TSPAN4-201ENST00000346501 SSH1Q8WYL5 1049 aa19.95■□□□□ 0.78
TSPAN4-201ENST00000346501 PLA2G12BQ9BX93 195 aa19.95■□□□□ 0.78
TSPAN4-201ENST00000346501 KIAA2012Q0VF49 1180 aa19.94■□□□□ 0.78
TSPAN4-201ENST00000346501 FSTL1Q12841 308 aa19.94■□□□□ 0.78
TSPAN4-201ENST00000346501 WASHC4Q2M389 1173 aa19.94■□□□□ 0.78
TSPAN4-201ENST00000346501 SMC1BQ8NDV3 1235 aa19.94■□□□□ 0.78
TSPAN4-201ENST00000346501 GJA3Q9Y6H8 435 aa19.94■□□□□ 0.78
TSPAN4-201ENST00000346501 GRM8O00222 908 aa19.93■□□□□ 0.78
TSPAN4-201ENST00000346501 LMOD1P29536 600 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-201ENST00000346501 BCL2L13Q9BXK5 485 aa19.93■□□□□ 0.78
TSPAN4-201ENST00000346501 ZNRF3Q9ULT6 936 aa19.93■□□□□ 0.78
TSPAN4-201ENST00000346501 CHMP3Q9Y3E7 222 aa19.93■□□□□ 0.78
TSPAN4-201ENST00000346501 RTL9Q8NET4 1388 aa19.93■□□□□ 0.78
TSPAN4-201ENST00000346501 L3MBTL3Q96JM7 780 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-201ENST00000346501 MPHOSPH8Q99549 860 aa19.92■□□□□ 0.78
TSPAN4-201ENST00000346501 ZC3H12CQ9C0D7 883 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-201ENST00000346501 GREM2Q9H772 168 aa19.92■□□□□ 0.78
TSPAN4-201ENST00000346501 HACL1Q9UJ83 578 aa19.92■□□□□ 0.78
TSPAN4-201ENST00000346501 GGA1Q9UJY5 639 aa19.92■□□□□ 0.78
TSPAN4-201ENST00000346501 ZNF541Q9H0D2 1346 aa19.92■□□□□ 0.78
TSPAN4-201ENST00000346501 WDR90Q96KV7 1748 aa19.91■□□□□ 0.78
TSPAN4-201ENST00000346501 ANKRD18BA2A2Z9 1011 aa19.91■□□□□ 0.78
TSPAN4-201ENST00000346501 HSPA6P17066 643 aa19.91■□□□□ 0.78
TSPAN4-201ENST00000346501 GPSM2P81274 684 aa19.91■□□□□ 0.78
TSPAN4-201ENST00000346501 TNIP1Q15025 636 aa19.91■□□□□ 0.78
TSPAN4-201ENST00000346501 BSDC1Q9NW68 430 aaPredicted RBP19.91■□□□□ 0.78
TSPAN4-201ENST00000346501 TAF1P21675 1872 aa19.9■□□□□ 0.78
TSPAN4-201ENST00000346501 UFL1O94874 794 aa19.9■□□□□ 0.78
TSPAN4-201ENST00000346501 ITGA6P23229 1130 aa19.9■□□□□ 0.78
TSPAN4-201ENST00000346501 IFIT5Q13325 482 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-201ENST00000346501 TAF7LQ5H9L4 462 aa19.9■□□□□ 0.78
TSPAN4-201ENST00000346501 PODXL2Q9NZ53 605 aa19.9■□□□□ 0.78
TSPAN4-201ENST00000346501 XDHP47989 1333 aa19.9■□□□□ 0.78
TSPAN4-201ENST00000346501 MYH3P11055 1940 aa19.9■□□□□ 0.78
TSPAN4-201ENST00000346501 ATP2B4P23634 1241 aa19.89■□□□□ 0.77
TSPAN4-201ENST00000346501 CASP7P55210 303 aa19.89■□□□□ 0.77
TSPAN4-201ENST00000346501 CCDC57Q2TAC2 916 aa19.89■□□□□ 0.77
TSPAN4-201ENST00000346501 PNMA8AQ86V59 439 aaPredicted RBP19.89■□□□□ 0.77
TSPAN4-201ENST00000346501 API5Q9BZZ5 524 aaKnown RBP19.89■□□□□ 0.77
TSPAN4-201ENST00000346501 KIF16BQ96L93 1317 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms