RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 EYA2O00167 538 aa26.27■■□□□ 1.8
TSPAN3-202ENST00000346495 HMGB2P26583 209 aaKnown RBP26.26■■□□□ 1.79
TSPAN3-202ENST00000346495 ATG9AQ7Z3C6 839 aa26.26■■□□□ 1.79
TSPAN3-202ENST00000346495 NTSR2O95665 410 aa26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 TNNI3KQ59H18 835 aa26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 TAF7LQ5H9L4 462 aa26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 C22orf23Q9BZE7 217 aa26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 CCDC8Q9H0W5 538 aaPredicted RBP26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 FPGT-TNNI3KV9GXZ4 949 aa26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 DDX60Q8IY21 1712 aaKnown RBP26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 ZPR1O75312 459 aa26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 RILPL2Q969X0 211 aa26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 ZNF594Q96JF6 807 aaPredicted RBP26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 GPR108Q9NPR9 543 aa26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 LRRC4BQ9NT99 713 aa26.25■■□□□ 1.79
TSPAN3-202ENST00000346495 C4AP0C0L4 1744 aa26.23■■□□□ 1.79
TSPAN3-202ENST00000346495 ANKRD18BA2A2Z9 1011 aa26.23■■□□□ 1.79
TSPAN3-202ENST00000346495 FAM177BA6PVY3 158 aa26.23■■□□□ 1.79
TSPAN3-202ENST00000346495 USPL1Q5W0Q7 1092 aa26.23■■□□□ 1.79
TSPAN3-202ENST00000346495 CNTROBQ8N137 903 aa26.22■■□□□ 1.79
TSPAN3-202ENST00000346495 ARHGEF1Q92888 912 aaKnown RBP26.22■■□□□ 1.79
TSPAN3-202ENST00000346495 CCDC85AQ96PX6 553 aaPredicted RBP26.22■■□□□ 1.79
TSPAN3-202ENST00000346495 GREM2Q9H772 168 aa26.22■■□□□ 1.79
TSPAN3-202ENST00000346495 BCL2L12Q9HB09 334 aa26.22■■□□□ 1.79
TSPAN3-202ENST00000346495 ITGA6P23229 1130 aa26.21■■□□□ 1.79
TSPAN3-202ENST00000346495 LRRC24Q50LG9 513 aa26.21■■□□□ 1.79
TSPAN3-202ENST00000346495 TRAPPC3LQ5T215 181 aa26.21■■□□□ 1.79
TSPAN3-202ENST00000346495 SMIM5Q71RC9 77 aa26.21■■□□□ 1.79
TSPAN3-202ENST00000346495 ADRA2BP18089 450 aa26.21■■□□□ 1.79
TSPAN3-202ENST00000346495 TLR7Q9NYK1 1049 aaKnown RBP26.21■■□□□ 1.79
TSPAN3-202ENST00000346495 UBR3Q6ZT12 1888 aa26.2■■□□□ 1.79
TSPAN3-202ENST00000346495 COL24A1Q17RW2 1714 aa26.2■■□□□ 1.78
TSPAN3-202ENST00000346495 PUS3Q9BZE2 481 aaKnown RBP26.2■■□□□ 1.78
TSPAN3-202ENST00000346495 SRP68Q9UHB9 627 aaKnown RBP26.2■■□□□ 1.78
TSPAN3-202ENST00000346495 HCLS1P14317 486 aaPredicted RBP26.19■■□□□ 1.78
TSPAN3-202ENST00000346495 RFC4P35249 363 aa26.19■■□□□ 1.78
TSPAN3-202ENST00000346495 TBC1D9BQ66K14 1250 aa26.19■■□□□ 1.78
TSPAN3-202ENST00000346495 CEP126Q9P2H0 1117 aa26.19■■□□□ 1.78
TSPAN3-202ENST00000346495 RBM25P49756 843 aaKnown RBP26.18■■□□□ 1.78
TSPAN3-202ENST00000346495 RGS17Q9UGC6 210 aaPredicted RBP26.18■■□□□ 1.78
TSPAN3-202ENST00000346495 CHMLP26374 656 aa26.17■■□□□ 1.78
TSPAN3-202ENST00000346495 AMIGO3Q86WK7 504 aa26.17■■□□□ 1.78
TSPAN3-202ENST00000346495 NYXQ9GZU5 481 aa26.17■■□□□ 1.78
TSPAN3-202ENST00000346495 DBNLQ9UJU6 430 aaKnown RBP26.17■■□□□ 1.78
TSPAN3-202ENST00000346495 MAP4K4O95819 1239 aaPredicted RBP26.17■■□□□ 1.78
TSPAN3-202ENST00000346495 SETDB2Q96T68 719 aa26.17■■□□□ 1.78
TSPAN3-202ENST00000346495 ZNF609O15014 1411 aa26.16■■□□□ 1.78
TSPAN3-202ENST00000346495 RTL9Q8NET4 1388 aa26.16■■□□□ 1.78
TSPAN3-202ENST00000346495 PLSCR1O15162 318 aa26.16■■□□□ 1.78
TSPAN3-202ENST00000346495 PHF14O94880 888 aa26.16■■□□□ 1.78
TSPAN3-202ENST00000346495 REC8O95072 547 aa26.16■■□□□ 1.78
TSPAN3-202ENST00000346495 TXNRD1Q16881 649 aa26.16■■□□□ 1.78
TSPAN3-202ENST00000346495 CCDC152Q4G0S7 254 aa26.16■■□□□ 1.78
TSPAN3-202ENST00000346495 LDHAL6AQ6ZMR3 332 aa26.16■■□□□ 1.78
TSPAN3-202ENST00000346495 BICDL1Q6ZP65 573 aa26.16■■□□□ 1.78
TSPAN3-202ENST00000346495 AKAP2Q9Y2D5 859 aa26.16■■□□□ 1.78
TSPAN3-202ENST00000346495 LRP5O75197 1615 aa26.15■■□□□ 1.78
TSPAN3-202ENST00000346495 ATP5JP18859 108 aa26.15■■□□□ 1.78
TSPAN3-202ENST00000346495 EVI5LQ96CN4 794 aa26.15■■□□□ 1.78
TSPAN3-202ENST00000346495 DBNDD2Q9BQY9 259 aa26.14■■□□□ 1.78
TSPAN3-202ENST00000346495 RIPOR2Q9Y4F9 1068 aa26.14■■□□□ 1.78
TSPAN3-202ENST00000346495 POTEAQ6S8J7 498 aa26.14■■□□□ 1.77
TSPAN3-202ENST00000346495 ESYT1Q9BSJ8 1104 aa26.14■■□□□ 1.77
TSPAN3-202ENST00000346495 CNNM1Q9NRU3 951 aa26.14■■□□□ 1.77
TSPAN3-202ENST00000346495 SSFA2P28290 1259 aa26.13■■□□□ 1.77
TSPAN3-202ENST00000346495 ERFEQ4G0M1 354 aa26.13■■□□□ 1.77
TSPAN3-202ENST00000346495 NEUROD6Q96NK8 337 aa26.13■■□□□ 1.77
TSPAN3-202ENST00000346495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.12■■□□□ 1.77
TSPAN3-202ENST00000346495 MSH5O43196 834 aa26.12■■□□□ 1.77
TSPAN3-202ENST00000346495 APBA3O96018 575 aa26.12■■□□□ 1.77
TSPAN3-202ENST00000346495 GTF2E1P29083 439 aaPredicted RBP26.12■■□□□ 1.77
TSPAN3-202ENST00000346495 SLC10A5Q5PT55 438 aa26.12■■□□□ 1.77
TSPAN3-202ENST00000346495 BOLA2Q9H3K6 86 aa26.12■■□□□ 1.77
TSPAN3-202ENST00000346495 CASZ1Q86V15 1759 aa26.12■■□□□ 1.77
TSPAN3-202ENST00000346495 RIC1Q4ADV7 1423 aa26.12■■□□□ 1.77
TSPAN3-202ENST00000346495 A0A1B0GUL7 405 aa26.11■■□□□ 1.77
TSPAN3-202ENST00000346495 METTL24Q5JXM2 366 aa26.11■■□□□ 1.77
TSPAN3-202ENST00000346495 PROM2Q8N271 834 aa26.11■■□□□ 1.77
TSPAN3-202ENST00000346495 TIMM10P62072 90 aa26.1■■□□□ 1.77
TSPAN3-202ENST00000346495 NBPF5PQ86XG9 351 aaPredicted RBP26.1■■□□□ 1.77
TSPAN3-202ENST00000346495 USP26Q9BXU7 913 aa26.1■■□□□ 1.77
TSPAN3-202ENST00000346495 TNS1Q9HBL0 1735 aaKnown RBP26.1■■□□□ 1.77
TSPAN3-202ENST00000346495 TPTE2Q6XPS3 522 aa26.1■■□□□ 1.77
TSPAN3-202ENST00000346495 SF3B3Q15393 1217 aaKnown RBP26.09■■□□□ 1.77
TSPAN3-202ENST00000346495 RGPD3A6NKT7 1758 aaPredicted RBP26.08■■□□□ 1.77
TSPAN3-202ENST00000346495 RGPD4Q7Z3J3 1758 aa26.08■■□□□ 1.77
TSPAN3-202ENST00000346495 MROH5Q6ZUA9 1318 aa26.08■■□□□ 1.77
TSPAN3-202ENST00000346495 HIP1O00291 1037 aa26.07■■□□□ 1.76
TSPAN3-202ENST00000346495 MPHOSPH8Q99549 860 aa26.07■■□□□ 1.76
TSPAN3-202ENST00000346495 DAXXQ9UER7 740 aaPredicted RBP26.07■■□□□ 1.76
TSPAN3-202ENST00000346495 CARMIL3Q8ND23 1372 aa26.07■■□□□ 1.76
TSPAN3-202ENST00000346495 IGHMBP2P38935 993 aaKnown RBP26.06■■□□□ 1.76
TSPAN3-202ENST00000346495 HAUS7Q99871 368 aa26.06■■□□□ 1.76
TSPAN3-202ENST00000346495 SEC31BQ9NQW1 1179 aa26.06■■□□□ 1.76
TSPAN3-202ENST00000346495 DIAPH3Q9NSV4 1193 aa26.06■■□□□ 1.76
TSPAN3-202ENST00000346495 SPEF2Q9C093 1822 aa26.06■■□□□ 1.76
TSPAN3-202ENST00000346495 ABCC12Q96J65 1359 aa26.06■■□□□ 1.76
TSPAN3-202ENST00000346495 BECN1Q14457 450 aa26.06■■□□□ 1.76
TSPAN3-202ENST00000346495 ATP2B3Q16720 1220 aa26.06■■□□□ 1.76
TSPAN3-202ENST00000346495 VGLL2Q8N8G2 317 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms