RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 SYTL4Q96C24 671 aaPredicted RBP13.82□□□□□ -0.2
COL12A1-202ENST00000345356 LRRC2Q9BYS8 371 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 GOLGA6AQ9NYA3 693 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 ZNF213O14771 459 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 KRT86O43790 486 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 MARCKSP29966 332 aaPredicted RBP13.82□□□□□ -0.2
COL12A1-202ENST00000345356 IARSP41252 1262 aaKnown RBP13.81□□□□□ -0.2
COL12A1-202ENST00000345356 CTNNBL1Q8WYA6 563 aaPredicted RBP13.81□□□□□ -0.2
COL12A1-202ENST00000345356 SELENOSQ9BQE4 189 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 VAV2P52735 878 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 EVA1CP58658 441 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 FLIIQ13045 1269 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 CFAP58Q5T655 872 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
COL12A1-202ENST00000345356 RBM28Q9NW13 759 aaKnown RBP13.81□□□□□ -0.2
COL12A1-202ENST00000345356 CCDC160A6NGH7 325 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 ERCC6LQ2NKX8 1250 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 PPP1R42Q7Z4L9 355 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 FAM114A1Q8IWE2 563 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 ARHGAP5Q13017 1502 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 BTBD11A6QL63 1104 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 IFIT1P09914 478 aaKnown RBP13.81□□□□□ -0.2
COL12A1-202ENST00000345356 AFAP1Q8N556 730 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 IFT81Q8WYA0 676 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
COL12A1-202ENST00000345356 KRT83P78385 493 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 RRAGBQ5VZM2 374 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 CETN2P41208 172 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 AFMP43652 599 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 GOLIM4O00461 696 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 BUB1BO60566 1050 aaPredicted RBP13.8□□□□□ -0.2
COL12A1-202ENST00000345356 SPAG1Q07617 926 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 CCDC144CPQ8IYA2 1237 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 ABTB2Q8N961 1025 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 GNAT3A8MTJ3 354 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 SPTLC2O15270 562 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 RHPN1Q8TCX5 695 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 DCTPP1Q9H773 170 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 KIF5AQ12840 1032 aa13.8□□□□□ -0.2
COL12A1-202ENST00000345356 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
COL12A1-202ENST00000345356 ARHGAP25P42331 645 aa13.79□□□□□ -0.2
COL12A1-202ENST00000345356 PPP1R12BO60237 982 aaPredicted RBP13.79□□□□□ -0.2
COL12A1-202ENST00000345356 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
COL12A1-202ENST00000345356 KIAA0753Q2KHM9 967 aa13.79□□□□□ -0.2
COL12A1-202ENST00000345356 CLSTN2Q9H4D0 955 aa13.79□□□□□ -0.2
COL12A1-202ENST00000345356 GNL3LQ9NVN8 582 aaKnown RBP13.79□□□□□ -0.2
COL12A1-202ENST00000345356 SAMD15Q9P1V8 674 aa13.79□□□□□ -0.2
COL12A1-202ENST00000345356 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
COL12A1-202ENST00000345356 CCDC141Q6ZP82 1450 aa13.79□□□□□ -0.2
COL12A1-202ENST00000345356 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
COL12A1-202ENST00000345356 LACTBP83111 547 aaPredicted RBP13.79□□□□□ -0.2
COL12A1-202ENST00000345356 LARP1Q6PKG0 1096 aaKnown RBP13.79□□□□□ -0.2
COL12A1-202ENST00000345356 CCDC50Q8IVM0 306 aa13.79□□□□□ -0.2
COL12A1-202ENST00000345356 Q6ZUG5 572 aa13.79□□□□□ -0.2
COL12A1-202ENST00000345356 FMNL3Q8IVF7 1028 aa13.79□□□□□ -0.2
COL12A1-202ENST00000345356 LRCH2Q5VUJ6 765 aa13.78□□□□□ -0.2
COL12A1-202ENST00000345356 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
COL12A1-202ENST00000345356 GOLGA5Q8TBA6 731 aa13.78□□□□□ -0.2
COL12A1-202ENST00000345356 MACROD2A1Z1Q3 448 aa13.78□□□□□ -0.2
COL12A1-202ENST00000345356 IFIT3O14879 490 aaKnown RBP13.78□□□□□ -0.2
COL12A1-202ENST00000345356 MICU3Q86XE3 530 aa13.78□□□□□ -0.2
COL12A1-202ENST00000345356 PAIP2Q9BPZ3 127 aaKnown RBP13.78□□□□□ -0.2
COL12A1-202ENST00000345356 RPGRIP1LQ68CZ1 1315 aa13.78□□□□□ -0.2
COL12A1-202ENST00000345356 A0A1W2PRG0 241 aa13.78□□□□□ -0.2
COL12A1-202ENST00000345356 METAP2P50579 478 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL12A1-202ENST00000345356 MYL5Q02045 173 aa13.78□□□□□ -0.2
COL12A1-202ENST00000345356 FAM160A1Q05DH4 1040 aa13.78□□□□□ -0.2
COL12A1-202ENST00000345356 NAPGQ99747 312 aaPredicted RBP13.78□□□□□ -0.2
COL12A1-202ENST00000345356 HAND2P61296 217 aa13.77□□□□□ -0.2
COL12A1-202ENST00000345356 LRMPQ12912 555 aa13.77□□□□□ -0.2
COL12A1-202ENST00000345356 CCDC40Q4G0X9 1142 aa13.77□□□□□ -0.2
COL12A1-202ENST00000345356 MPHOSPH8Q99549 860 aa13.77□□□□□ -0.2
COL12A1-202ENST00000345356 HPDP32754 393 aaPredicted RBP13.77□□□□□ -0.2
COL12A1-202ENST00000345356 NAPBQ9H115 298 aa13.77□□□□□ -0.2
COL12A1-202ENST00000345356 AKR1B15C9JRZ8 316 aaPredicted RBP13.77□□□□□ -0.21
COL12A1-202ENST00000345356 IFI16Q16666 785 aaKnown RBP13.77□□□□□ -0.21
COL12A1-202ENST00000345356 RPAINQ86UA6 219 aa13.77□□□□□ -0.21
COL12A1-202ENST00000345356 WDR66Q8TBY9 1149 aa13.77□□□□□ -0.21
COL12A1-202ENST00000345356 IMPACTQ9P2X3 320 aa13.77□□□□□ -0.21
COL12A1-202ENST00000345356 KLF18A0A0U1RQI7 1052 aa13.77□□□□□ -0.21
COL12A1-202ENST00000345356 GPT2Q8TD30 523 aa13.77□□□□□ -0.21
COL12A1-202ENST00000345356 PYCARDQ9ULZ3 195 aa13.77□□□□□ -0.21
COL12A1-202ENST00000345356 CHMLP26374 656 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 TUBB2AQ13885 445 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 GPR161Q8N6U8 529 aaKnown RBP13.76□□□□□ -0.21
COL12A1-202ENST00000345356 PYM1Q9BRP8 204 aaKnown RBP13.76□□□□□ -0.21
COL12A1-202ENST00000345356 TUBB2BQ9BVA1 445 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 SLC26A6Q9BXS9 759 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 RMND1Q9NWS8 449 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 A6NNZ2 444 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 GCKP35557 465 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 PCK1P35558 622 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 TUBB8Q3ZCM7 444 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 STMN4Q9H169 189 aaPredicted RBP13.76□□□□□ -0.21
COL12A1-202ENST00000345356 SERPINA10Q9UK55 444 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 RTEL1-TNFRSF6BF6WH68 1400 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 HOOK3Q86VS8 718 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 SELENOOQ9BVL4 669 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 CAPN7Q9Y6W3 813 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 STX17P56962 302 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms