RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 LRRC37AA6NMS7 1700 aa17.51■□□□□ 0.39
TPM4-202ENST00000344824 COL4A1P02462 1669 aa17.51■□□□□ 0.39
TPM4-202ENST00000344824 BCAR3O75815 825 aa17.51■□□□□ 0.39
TPM4-202ENST00000344824 PCCAP05165 728 aaPredicted RBP17.51■□□□□ 0.39
TPM4-202ENST00000344824 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
TPM4-202ENST00000344824 RARSP54136 660 aaKnown RBP17.51■□□□□ 0.39
TPM4-202ENST00000344824 DNAAF4Q8WXU2 420 aa17.51■□□□□ 0.39
TPM4-202ENST00000344824 CCDC85AQ96PX6 553 aaPredicted RBP17.51■□□□□ 0.39
TPM4-202ENST00000344824 NMRK2Q9NPI5 230 aa17.51■□□□□ 0.39
TPM4-202ENST00000344824 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
TPM4-202ENST00000344824 IGKV5-2P06315 115 aa17.5■□□□□ 0.39
TPM4-202ENST00000344824 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
TPM4-202ENST00000344824 ZC3H4Q9UPT8 1303 aaKnown RBP17.5■□□□□ 0.39
TPM4-202ENST00000344824 NEURL1BA8MQ27 555 aa17.49■□□□□ 0.39
TPM4-202ENST00000344824 F6X3S4 739 aa17.49■□□□□ 0.39
TPM4-202ENST00000344824 GRAPQ13588 217 aa17.49■□□□□ 0.39
TPM4-202ENST00000344824 GRAPLQ8TC17 118 aaPredicted RBP17.49■□□□□ 0.39
TPM4-202ENST00000344824 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
TPM4-202ENST00000344824 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
TPM4-202ENST00000344824 PLIN1O60240 522 aa17.47■□□□□ 0.39
TPM4-202ENST00000344824 CC2D2BQ6DHV5 1058 aa17.47■□□□□ 0.39
TPM4-202ENST00000344824 UBE3BQ7Z3V4 1068 aa17.47■□□□□ 0.39
TPM4-202ENST00000344824 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
TPM4-202ENST00000344824 PDE8AO60658 829 aa17.47■□□□□ 0.39
TPM4-202ENST00000344824 IARSP41252 1262 aaKnown RBP17.47■□□□□ 0.39
TPM4-202ENST00000344824 RRP1P56182 461 aaKnown RBP17.47■□□□□ 0.39
TPM4-202ENST00000344824 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
TPM4-202ENST00000344824 SLC4A10Q6U841 1118 aa17.47■□□□□ 0.39
TPM4-202ENST00000344824 C16orf71Q8IYS4 520 aaPredicted RBP17.47■□□□□ 0.39
TPM4-202ENST00000344824 FRAT1Q92837 279 aaPredicted RBP17.47■□□□□ 0.39
TPM4-202ENST00000344824 CELF1Q92879 486 aaKnown RBP17.47■□□□□ 0.39
TPM4-202ENST00000344824 ATP6V0A2Q9Y487 856 aa17.47■□□□□ 0.39
TPM4-202ENST00000344824 CDHR2Q9BYE9 1310 aa17.46■□□□□ 0.39
TPM4-202ENST00000344824 WDR90Q96KV7 1748 aa17.46■□□□□ 0.39
TPM4-202ENST00000344824 C1QTNF8P60827 252 aa17.46■□□□□ 0.39
TPM4-202ENST00000344824 SF3B3Q15393 1217 aaKnown RBP17.46■□□□□ 0.39
TPM4-202ENST00000344824 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
TPM4-202ENST00000344824 CCDC152Q4G0S7 254 aa17.46■□□□□ 0.39
TPM4-202ENST00000344824 DPY19L2Q6NUT2 758 aa17.46■□□□□ 0.39
TPM4-202ENST00000344824 PSMD1Q99460 953 aa17.46■□□□□ 0.39
TPM4-202ENST00000344824 RRAGCQ9HB90 399 aa17.46■□□□□ 0.39
TPM4-202ENST00000344824 GLTPD2A6NH11 291 aa17.45■□□□□ 0.38
TPM4-202ENST00000344824 KIF3CO14782 793 aa17.45■□□□□ 0.38
TPM4-202ENST00000344824 BBOX1O75936 387 aa17.45■□□□□ 0.38
TPM4-202ENST00000344824 DPP8Q6V1X1 898 aaPredicted RBP17.45■□□□□ 0.38
TPM4-202ENST00000344824 LINS1Q8NG48 757 aa17.45■□□□□ 0.38
TPM4-202ENST00000344824 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
TPM4-202ENST00000344824 COL4A5P29400 1685 aa17.44■□□□□ 0.38
TPM4-202ENST00000344824 PPIP5K2O43314 1243 aa17.44■□□□□ 0.38
TPM4-202ENST00000344824 CTSWP56202 376 aa17.44■□□□□ 0.38
TPM4-202ENST00000344824 GCKRQ14397 625 aa17.44■□□□□ 0.38
TPM4-202ENST00000344824 LARGE2Q8N3Y3 721 aa17.44■□□□□ 0.38
TPM4-202ENST00000344824 MPNDQ8N594 471 aa17.44■□□□□ 0.38
TPM4-202ENST00000344824 JDP2Q8WYK2 163 aa17.44■□□□□ 0.38
TPM4-202ENST00000344824 NEFLP07196 543 aa17.43■□□□□ 0.38
TPM4-202ENST00000344824 AOC3Q16853 763 aa17.43■□□□□ 0.38
TPM4-202ENST00000344824 GRIPAP1Q4V328 841 aa17.43■□□□□ 0.38
TPM4-202ENST00000344824 SP8Q8IXZ3 490 aa17.43■□□□□ 0.38
TPM4-202ENST00000344824 MRPL50Q8N5N7 158 aaKnown RBP17.43■□□□□ 0.38
TPM4-202ENST00000344824 DUOX1Q9NRD9 1551 aa17.43■□□□□ 0.38
TPM4-202ENST00000344824 ZNF541Q9H0D2 1346 aa17.43■□□□□ 0.38
TPM4-202ENST00000344824 DDNO94850 711 aaPredicted RBP17.42■□□□□ 0.38
TPM4-202ENST00000344824 TMC4Q7Z404 712 aa17.42■□□□□ 0.38
TPM4-202ENST00000344824 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.42■□□□□ 0.38
TPM4-202ENST00000344824 SCN4AP35499 1836 aa17.42■□□□□ 0.38
TPM4-202ENST00000344824 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
TPM4-202ENST00000344824 BEND3Q5T5X7 828 aa17.41■□□□□ 0.38
TPM4-202ENST00000344824 NIM1KQ8IY84 436 aa17.41■□□□□ 0.38
TPM4-202ENST00000344824 SUPT20HQ8NEM7 779 aa17.41■□□□□ 0.38
TPM4-202ENST00000344824 NOB1Q9ULX3 412 aaKnown RBP17.41■□□□□ 0.38
TPM4-202ENST00000344824 H7C1W4 665 aa17.4■□□□□ 0.38
TPM4-202ENST00000344824 ANKRD18AQ8IVF6 992 aa17.4■□□□□ 0.38
TPM4-202ENST00000344824 SRCIN1Q9C0H9 1055 aa17.4■□□□□ 0.38
TPM4-202ENST00000344824 NSFL1CQ9UNZ2 370 aaKnown RBP17.4■□□□□ 0.38
TPM4-202ENST00000344824 CHMP3Q9Y3E7 222 aa17.4■□□□□ 0.38
TPM4-202ENST00000344824 KIF16BQ96L93 1317 aa17.4■□□□□ 0.38
TPM4-202ENST00000344824 EIF6P56537 245 aaKnown RBP17.39■□□□□ 0.38
TPM4-202ENST00000344824 RPS8P62241 208 aaKnown RBP17.39■□□□□ 0.38
TPM4-202ENST00000344824 TNNQ9UQP3 1299 aa17.39■□□□□ 0.38
TPM4-202ENST00000344824 GJA3Q9Y6H8 435 aa17.39■□□□□ 0.38
TPM4-202ENST00000344824 A0A1B0GUL6 1792 aa17.39■□□□□ 0.37
TPM4-202ENST00000344824 C6orf229H3BNL8 230 aa17.38■□□□□ 0.37
TPM4-202ENST00000344824 CDC5LQ99459 802 aaKnown RBP17.38■□□□□ 0.37
TPM4-202ENST00000344824 GREM2Q9H772 168 aa17.38■□□□□ 0.37
TPM4-202ENST00000344824 C9orf78Q9NZ63 289 aaPredicted RBP17.38■□□□□ 0.37
TPM4-202ENST00000344824 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
TPM4-202ENST00000344824 PTPRCP08575 1304 aa17.38■□□□□ 0.37
TPM4-202ENST00000344824 VEGFAP15692 232 aaPredicted RBP17.38■□□□□ 0.37
TPM4-202ENST00000344824 GPSM2P81274 684 aa17.38■□□□□ 0.37
TPM4-202ENST00000344824 FAM161AQ3B820 660 aa17.38■□□□□ 0.37
TPM4-202ENST00000344824 C20orf194Q5TEA3 1177 aa17.38■□□□□ 0.37
TPM4-202ENST00000344824 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
TPM4-202ENST00000344824 TTLL11Q8NHH1 800 aa17.38■□□□□ 0.37
TPM4-202ENST00000344824 RIMBP2O15034 1052 aa17.37■□□□□ 0.37
TPM4-202ENST00000344824 TOMM70O94826 608 aa17.37■□□□□ 0.37
TPM4-202ENST00000344824 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
TPM4-202ENST00000344824 GPR101Q96P66 508 aaPredicted RBP17.37■□□□□ 0.37
TPM4-202ENST00000344824 FZD9O00144 591 aa17.36■□□□□ 0.37
TPM4-202ENST00000344824 GRM8O00222 908 aa17.36■□□□□ 0.37
TPM4-202ENST00000344824 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms