RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 DPP8Q6V1X1 898 aaPredicted RBP16.08■□□□□ 0.16
SGCA-202ENST00000344627 DBF4Q9UBU7 674 aaPredicted RBP16.08■□□□□ 0.16
SGCA-202ENST00000344627 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
SGCA-202ENST00000344627 HCLS1P14317 486 aaPredicted RBP16.07■□□□□ 0.16
SGCA-202ENST00000344627 VEGFBP49765 207 aa16.07■□□□□ 0.16
SGCA-202ENST00000344627 GRAPQ13588 217 aa16.07■□□□□ 0.16
SGCA-202ENST00000344627 CCDC184Q52MB2 194 aa16.07■□□□□ 0.16
SGCA-202ENST00000344627 ANKRD13DQ6ZTN6 518 aa16.07■□□□□ 0.16
SGCA-202ENST00000344627 C3orf67Q6ZVT6 689 aa16.07■□□□□ 0.16
SGCA-202ENST00000344627 MPNDQ8N594 471 aa16.07■□□□□ 0.16
SGCA-202ENST00000344627 PLBD2Q8NHP8 589 aa16.07■□□□□ 0.16
SGCA-202ENST00000344627 GRAPLQ8TC17 118 aaPredicted RBP16.07■□□□□ 0.16
SGCA-202ENST00000344627 ZC3H15Q8WU90 426 aaKnown RBP16.07■□□□□ 0.16
SGCA-202ENST00000344627 IFT57Q9NWB7 429 aa16.07■□□□□ 0.16
SGCA-202ENST00000344627 ABCC4O15439 1325 aa16.07■□□□□ 0.16
SGCA-202ENST00000344627 ANKRD36CQ5JPF3 1778 aa16.07■□□□□ 0.16
SGCA-202ENST00000344627 ANP32CO43423 234 aa16.06■□□□□ 0.16
SGCA-202ENST00000344627 KIAA2012Q0VF49 1180 aa16.06■□□□□ 0.16
SGCA-202ENST00000344627 MAP1SQ66K74 1059 aaPredicted RBP16.06■□□□□ 0.16
SGCA-202ENST00000344627 HYPKQ9NX55 129 aa16.06■□□□□ 0.16
SGCA-202ENST00000344627 WBP1LQ9NX94 342 aa16.06■□□□□ 0.16
SGCA-202ENST00000344627 GPRC5DQ9NZD1 345 aa16.06■□□□□ 0.16
SGCA-202ENST00000344627 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
SGCA-202ENST00000344627 TRIM28Q13263 835 aaKnown RBP16.05■□□□□ 0.16
SGCA-202ENST00000344627 ABT1Q9ULW3 272 aaKnown RBP16.05■□□□□ 0.16
SGCA-202ENST00000344627 WDR33Q9C0J8 1336 aaKnown RBP16.04■□□□□ 0.16
SGCA-202ENST00000344627 ZNF853P0CG23 659 aa16.04■□□□□ 0.16
SGCA-202ENST00000344627 SF3B3Q15393 1217 aaKnown RBP16.04■□□□□ 0.16
SGCA-202ENST00000344627 AOC3Q16853 763 aa16.04■□□□□ 0.16
SGCA-202ENST00000344627 CIAPIN1Q6FI81 312 aa16.04■□□□□ 0.16
SGCA-202ENST00000344627 RIC3Q7Z5B4 369 aa16.04■□□□□ 0.16
SGCA-202ENST00000344627 HHIPL1Q96JK4 782 aa16.04■□□□□ 0.16
SGCA-202ENST00000344627 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
SGCA-202ENST00000344627 PGAP2Q9UHJ9 254 aa16.04■□□□□ 0.16
SGCA-202ENST00000344627 FOXN1O15353 648 aa16.03■□□□□ 0.16
SGCA-202ENST00000344627 EPS15P42566 896 aa16.03■□□□□ 0.16
SGCA-202ENST00000344627 GOLGA2Q08379 1002 aa16.03■□□□□ 0.16
SGCA-202ENST00000344627 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
SGCA-202ENST00000344627 BEGAINQ9BUH8 593 aa16.03■□□□□ 0.16
SGCA-202ENST00000344627 MAP2K2P36507 400 aa16.02■□□□□ 0.16
SGCA-202ENST00000344627 CXCL9Q07325 125 aa16.02■□□□□ 0.16
SGCA-202ENST00000344627 C8orf58Q8NAV2 365 aa16.02■□□□□ 0.16
SGCA-202ENST00000344627 ISCA1Q9BUE6 129 aa16.02■□□□□ 0.16
SGCA-202ENST00000344627 H7C1D1 291 aa16.01■□□□□ 0.15
SGCA-202ENST00000344627 CA12O43570 354 aa16.01■□□□□ 0.15
SGCA-202ENST00000344627 SLC51AQ86UW1 340 aa16.01■□□□□ 0.15
SGCA-202ENST00000344627 DPF2Q92785 391 aa16.01■□□□□ 0.15
SGCA-202ENST00000344627 FAM89AQ96GI7 184 aa16.01■□□□□ 0.15
SGCA-202ENST00000344627 EYA3Q99504 573 aa16.01■□□□□ 0.15
SGCA-202ENST00000344627 BCL2L13Q9BXK5 485 aa16.01■□□□□ 0.15
SGCA-202ENST00000344627 PHAXQ9H814 394 aaKnown RBP16.01■□□□□ 0.15
SGCA-202ENST00000344627 SALL2Q9Y467 1007 aaPredicted RBP16.01■□□□□ 0.15
SGCA-202ENST00000344627 TLL2Q9Y6L7 1015 aa16.01■□□□□ 0.15
SGCA-202ENST00000344627 LAMB2P55268 1798 aa16■□□□□ 0.15
SGCA-202ENST00000344627 CCDC30Q5VVM6 783 aa16■□□□□ 0.15
SGCA-202ENST00000344627 CDC37L1Q7L3B6 337 aa16■□□□□ 0.15
SGCA-202ENST00000344627 TSR2Q969E8 191 aaKnown RBP16■□□□□ 0.15
SGCA-202ENST00000344627 TAF1P21675 1872 aa15.99■□□□□ 0.15
SGCA-202ENST00000344627 COL4A5P29400 1685 aa15.99■□□□□ 0.15
SGCA-202ENST00000344627 RPS12P25398 132 aaKnown RBP15.99■□□□□ 0.15
SGCA-202ENST00000344627 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
SGCA-202ENST00000344627 DDX58O95786 925 aaKnown RBP15.98■□□□□ 0.15
SGCA-202ENST00000344627 GMPSP49915 693 aaPredicted RBP15.98■□□□□ 0.15
SGCA-202ENST00000344627 WWC1Q8IX03 1113 aa15.98■□□□□ 0.15
SGCA-202ENST00000344627 CAPNS2Q96L46 248 aa15.98■□□□□ 0.15
SGCA-202ENST00000344627 GPR101Q96P66 508 aaPredicted RBP15.98■□□□□ 0.15
SGCA-202ENST00000344627 MYD88Q99836 296 aa15.98■□□□□ 0.15
SGCA-202ENST00000344627 CAPN15O75808 1086 aa15.97■□□□□ 0.15
SGCA-202ENST00000344627 CST9Q5W186 159 aa15.97■□□□□ 0.15
SGCA-202ENST00000344627 TSPYL6Q8N831 410 aa15.97■□□□□ 0.15
SGCA-202ENST00000344627 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
SGCA-202ENST00000344627 STK31Q9BXU1 1019 aa15.97■□□□□ 0.15
SGCA-202ENST00000344627 IRS4O14654 1257 aaPredicted RBP15.96■□□□□ 0.15
SGCA-202ENST00000344627 LBX1P52954 281 aa15.96■□□□□ 0.15
SGCA-202ENST00000344627 SAPCD2Q86UD0 394 aa15.96■□□□□ 0.15
SGCA-202ENST00000344627 CCDC191Q8NCU4 936 aa15.96■□□□□ 0.15
SGCA-202ENST00000344627 CNOT7Q9UIV1 285 aaKnown RBP15.96■□□□□ 0.15
SGCA-202ENST00000344627 NSFL1CQ9UNZ2 370 aaKnown RBP15.96■□□□□ 0.15
SGCA-202ENST00000344627 LTBP1Q14766 1721 aa15.96■□□□□ 0.15
SGCA-202ENST00000344627 DDX60Q8IY21 1712 aaKnown RBP15.95■□□□□ 0.14
SGCA-202ENST00000344627 HSPA8P11142 646 aaKnown RBP15.95■□□□□ 0.14
SGCA-202ENST00000344627 RPS8P62241 208 aaKnown RBP15.95■□□□□ 0.14
SGCA-202ENST00000344627 CCDC27Q2M243 656 aa15.95■□□□□ 0.14
SGCA-202ENST00000344627 PODXL2Q9NZ53 605 aa15.95■□□□□ 0.14
SGCA-202ENST00000344627 RAD17O75943 681 aa15.94■□□□□ 0.14
SGCA-202ENST00000344627 CELF2O95319 508 aaKnown RBP15.94■□□□□ 0.14
SGCA-202ENST00000344627 BRPF1P55201 1214 aaPredicted RBP15.94■□□□□ 0.14
SGCA-202ENST00000344627 TWISTNBQ3B726 338 aaPredicted RBP15.94■□□□□ 0.14
SGCA-202ENST00000344627 CCDC152Q4G0S7 254 aa15.94■□□□□ 0.14
SGCA-202ENST00000344627 PAXIP1Q6ZW49 1069 aaPredicted RBP15.94■□□□□ 0.14
SGCA-202ENST00000344627 FAM9BQ8IZU0 186 aa15.94■□□□□ 0.14
SGCA-202ENST00000344627 JARID2Q92833 1246 aaPredicted RBP15.94■□□□□ 0.14
SGCA-202ENST00000344627 ZC3H12CQ9C0D7 883 aaKnown RBP15.94■□□□□ 0.14
SGCA-202ENST00000344627 CWC25Q9NXE8 425 aaPredicted RBP15.94■□□□□ 0.14
SGCA-202ENST00000344627 C6orf229H3BNL8 230 aa15.93■□□□□ 0.14
SGCA-202ENST00000344627 MAP3K2Q9Y2U5 619 aa15.93■□□□□ 0.14
SGCA-202ENST00000344627 THSD7BQ9C0I4 1608 aa15.93■□□□□ 0.14
SGCA-202ENST00000344627 YDJCA8MPS7 323 aa15.92■□□□□ 0.14
SGCA-202ENST00000344627 TRAF5O00463 557 aa15.92■□□□□ 0.14
SGCA-202ENST00000344627 PDE8AO60658 829 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms