RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 A0A1B0GUL7 405 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 MNAT1P51948 309 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 NBPF11Q86T75 865 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 GUCY1B3Q02153 619 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 CCDC91Q7Z6B0 441 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 KCNH5Q8NCM2 988 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 ANKRD24Q8TF21 1146 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 CENPHQ9H3R5 247 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 HSF2BPO75031 334 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 SSRP1Q08945 709 aaKnown RBP5.5□□□□□ -1.53
CSMD3-203ENST00000343508 MCMDC2Q4G0Z9 681 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 USP19O94966 1318 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 GTF2E1P29083 439 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-203ENST00000343508 BRAPQ7Z569 592 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 RAI14Q9P0K7 980 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 CT47A1Q5JQC4 288 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-203ENST00000343508 SYT10Q6XYQ8 523 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 CCDC8Q9H0W5 538 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-203ENST00000343508 VPS18Q9P253 973 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 ABCC4O15439 1325 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 IQGAP1P46940 1657 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 FGFR1OPO95684 399 aaKnown RBP5.5□□□□□ -1.53
CSMD3-203ENST00000343508 GSPT1P15170 499 aaKnown RBP5.5□□□□□ -1.53
CSMD3-203ENST00000343508 CDC25BP30305 580 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 CCT2P78371 535 aaKnown RBP5.5□□□□□ -1.53
CSMD3-203ENST00000343508 MCM6Q14566 821 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 WAPLQ7Z5K2 1190 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 MADDQ8WXG6 1647 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 ALS2CR12Q96Q35 445 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 MPHOSPH8Q99549 860 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 MYO1BO43795 1136 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 C10orf67Q8IYJ2 551 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 SLC12A7Q9Y666 1083 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 NPATQ14207 1427 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 ATP2B1P20020 1258 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 CREB3L3Q68CJ9 461 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 GPR161Q8N6U8 529 aaKnown RBP5.5□□□□□ -1.53
CSMD3-203ENST00000343508 NECAB1Q8N987 351 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 TANGO6Q9C0B7 1094 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 CEP126Q9P2H0 1117 aa5.5□□□□□ -1.53
CSMD3-203ENST00000343508 GADD45BO75293 160 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 NF2P35240 595 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 ZNF75DP51815 510 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 NCOA7Q8NI08 942 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 BAG1Q99933 345 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 UTP14AQ9BVJ6 771 aaKnown RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 CLSTN2Q9H4D0 955 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 CD109Q6YHK3 1445 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 BIN1O00499 593 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 EVA1CP58658 441 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 MAP3K2Q9Y2U5 619 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 SNX14Q9Y5W7 946 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 KRT86O43790 486 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 OPA1O60313 960 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 TTF1Q15361 905 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 NME9Q86XW9 330 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 AIDAQ96BJ3 306 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 UBAC1Q9BSL1 405 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 DENND4BO75064 1496 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 Q6ZUG5 572 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 GTF3C6Q969F1 213 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 EDC4Q6P2E9 1401 aaKnown RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 ISM2Q6H9L7 571 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 SLC26A8Q96RN1 970 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 DMRT2Q9Y5R5 561 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 FAM177BA6PVY3 158 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 EBAG9O00559 213 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 RMND1Q9NWS8 449 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 ATP10AO60312 1499 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 GCOM1H8Y6P7 765 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 SPTLC2O15270 562 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 MYZAPP0CAP1 466 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 HSPA4P34932 840 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 IARSP41252 1262 aaKnown RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 METAP2P50579 478 aaKnown RBP eCLIP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 EVCP57679 992 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 PPP2R3AQ06190 1150 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 KLHL10Q6JEL2 608 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 TRERF1Q96PN7 1200 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 GOLGA8BA8MQT2 603 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 TATP17735 454 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 NUTM2GQ5VZR2 741 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 TSPYL6Q8N831 410 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 CBX8Q9HC52 389 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 ATP8B1O43520 1251 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 KRT83P78385 493 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 MAP2K1Q02750 393 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 ZNF530Q6P9A1 599 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-203ENST00000343508 PLEKHF1Q96S99 279 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 KIAA0232Q92628 1395 aa5.49□□□□□ -1.53
CSMD3-203ENST00000343508 RPS6KB1P23443 525 aa5.48□□□□□ -1.53
CSMD3-203ENST00000343508 BABAM1Q9NWV8 329 aa5.48□□□□□ -1.53
CSMD3-203ENST00000343508 RSPH14Q9UHP6 348 aa5.48□□□□□ -1.53
CSMD3-203ENST00000343508 ABCA8O94911 1581 aa5.48□□□□□ -1.53
CSMD3-203ENST00000343508 TTC21AQ8NDW8 1320 aa5.48□□□□□ -1.53
CSMD3-203ENST00000343508 SGSM2O43147 1006 aa5.48□□□□□ -1.53
CSMD3-203ENST00000343508 AMPD3Q01432 767 aa5.48□□□□□ -1.53
CSMD3-203ENST00000343508 NUP133Q8WUM0 1156 aa5.48□□□□□ -1.53
CSMD3-203ENST00000343508 LEO1Q8WVC0 666 aaPredicted RBP5.48□□□□□ -1.53
CSMD3-203ENST00000343508 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms