RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 RFX5P48382 616 aaPredicted RBP17.76■□□□□ 0.43
PBX3-201ENST00000342287 CICQ96RK0 1608 aaPredicted RBP17.76■□□□□ 0.43
PBX3-201ENST00000342287 ZBTB38Q8NAP3 1195 aaPredicted RBP17.76■□□□□ 0.43
PBX3-201ENST00000342287 FAM182BQ5T319 152 aa17.75■□□□□ 0.43
PBX3-201ENST00000342287 TSHZ3Q63HK5 1081 aa17.75■□□□□ 0.43
PBX3-201ENST00000342287 ZSCAN30Q86W11 494 aa17.75■□□□□ 0.43
PBX3-201ENST00000342287 SIL1Q9H173 461 aa17.75■□□□□ 0.43
PBX3-201ENST00000342287 SASH1O94885 1247 aa17.75■□□□□ 0.43
PBX3-201ENST00000342287 PTPN12Q05209 780 aaKnown RBP17.75■□□□□ 0.43
PBX3-201ENST00000342287 CASC1Q6TDU7 716 aa17.75■□□□□ 0.43
PBX3-201ENST00000342287 PTF1AQ7RTS3 328 aa17.75■□□□□ 0.43
PBX3-201ENST00000342287 NLRP10Q86W26 655 aa17.75■□□□□ 0.43
PBX3-201ENST00000342287 KLHDC4Q8TBB5 520 aa17.75■□□□□ 0.43
PBX3-201ENST00000342287 KIF20AO95235 890 aa17.74■□□□□ 0.43
PBX3-201ENST00000342287 CCDC94Q9BW85 323 aaPredicted RBP17.74■□□□□ 0.43
PBX3-201ENST00000342287 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
PBX3-201ENST00000342287 CHMP3Q9Y3E7 222 aa17.74■□□□□ 0.43
PBX3-201ENST00000342287 GPTP24298 496 aa17.74■□□□□ 0.43
PBX3-201ENST00000342287 ZNF831Q5JPB2 1677 aa17.73■□□□□ 0.43
PBX3-201ENST00000342287 IFIT2P09913 472 aaKnown RBP17.73■□□□□ 0.43
PBX3-201ENST00000342287 FAM89AQ96GI7 184 aa17.73■□□□□ 0.43
PBX3-201ENST00000342287 USP42Q9H9J4 1324 aaKnown RBP17.73■□□□□ 0.43
PBX3-201ENST00000342287 PLA2G12BQ9BX93 195 aa17.73■□□□□ 0.43
PBX3-201ENST00000342287 TTC41PQ6P2S7 1318 aa17.72■□□□□ 0.43
PBX3-201ENST00000342287 TEX2Q8IWB9 1127 aa17.72■□□□□ 0.43
PBX3-201ENST00000342287 ZNF34Q8IZ26 560 aa17.72■□□□□ 0.43
PBX3-201ENST00000342287 LINC00116Q8NCU8 138 aa17.72■□□□□ 0.43
PBX3-201ENST00000342287 AACSQ86V21 672 aa17.72■□□□□ 0.43
PBX3-201ENST00000342287 GPATCH3Q96I76 525 aa17.72■□□□□ 0.43
PBX3-201ENST00000342287 RREB1Q92766 1687 aa17.71■□□□□ 0.43
PBX3-201ENST00000342287 DNTTIP2Q5QJE6 756 aaKnown RBP17.71■□□□□ 0.43
PBX3-201ENST00000342287 PI4K2BQ8TCG2 481 aa17.71■□□□□ 0.43
PBX3-201ENST00000342287 CDHR2Q9BYE9 1310 aa17.71■□□□□ 0.43
PBX3-201ENST00000342287 TRIM6-TRIM34B2RNG4 842 aa17.71■□□□□ 0.43
PBX3-201ENST00000342287 NHSQ6T4R5 1651 aa17.71■□□□□ 0.43
PBX3-201ENST00000342287 ERC2O15083 957 aa17.7■□□□□ 0.42
PBX3-201ENST00000342287 CAMTA2O94983 1202 aa17.7■□□□□ 0.42
PBX3-201ENST00000342287 CBX1P83916 185 aa17.7■□□□□ 0.42
PBX3-201ENST00000342287 TRMT112Q9UI30 125 aaKnown RBP17.7■□□□□ 0.42
PBX3-201ENST00000342287 RILPL2Q969X0 211 aa17.7■□□□□ 0.42
PBX3-201ENST00000342287 EAF2Q96CJ1 260 aaPredicted RBP17.7■□□□□ 0.42
PBX3-201ENST00000342287 GTPBP4Q9BZE4 634 aaKnown RBP17.7■□□□□ 0.42
PBX3-201ENST00000342287 ECHDC1Q9NTX5 307 aa17.7■□□□□ 0.42
PBX3-201ENST00000342287 CNTNAP4Q9C0A0 1308 aa17.7■□□□□ 0.42
PBX3-201ENST00000342287 GLRX3O76003 335 aaKnown RBP17.69■□□□□ 0.42
PBX3-201ENST00000342287 RC3H1Q5TC82 1133 aaKnown RBP17.69■□□□□ 0.42
PBX3-201ENST00000342287 GAS2L3Q86XJ1 694 aa17.69■□□□□ 0.42
PBX3-201ENST00000342287 LETM1O95202 739 aaPredicted RBP17.69■□□□□ 0.42
PBX3-201ENST00000342287 KCNQ4P56696 695 aa17.69■□□□□ 0.42
PBX3-201ENST00000342287 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.69■□□□□ 0.42
PBX3-201ENST00000342287 DYNC1I1O14576 645 aa17.68■□□□□ 0.42
PBX3-201ENST00000342287 CSF1RP07333 972 aa17.68■□□□□ 0.42
PBX3-201ENST00000342287 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
PBX3-201ENST00000342287 BTAF1O14981 1849 aa17.68■□□□□ 0.42
PBX3-201ENST00000342287 RBM25P49756 843 aaKnown RBP17.68■□□□□ 0.42
PBX3-201ENST00000342287 CCNL1Q9UK58 526 aaPredicted RBP17.68■□□□□ 0.42
PBX3-201ENST00000342287 COL5A3P25940 1745 aaPredicted RBP17.68■□□□□ 0.42
PBX3-201ENST00000342287 MYH14Q7Z406 1995 aaKnown RBP17.68■□□□□ 0.42
PBX3-201ENST00000342287 UBN2Q6ZU65 1347 aa17.68■□□□□ 0.42
PBX3-201ENST00000342287 TFCP2Q12800 502 aa17.68■□□□□ 0.42
PBX3-201ENST00000342287 ZNF652Q9Y2D9 606 aa17.68■□□□□ 0.42
PBX3-201ENST00000342287 SYNE4Q8N205 404 aa17.67■□□□□ 0.42
PBX3-201ENST00000342287 CCDC8Q9H0W5 538 aaPredicted RBP17.67■□□□□ 0.42
PBX3-201ENST00000342287 CGNQ9P2M7 1197 aaKnown RBP17.67■□□□□ 0.42
PBX3-201ENST00000342287 ISY1Q9ULR0 285 aaKnown RBP17.67■□□□□ 0.42
PBX3-201ENST00000342287 NUP98P52948 1817 aa17.67■□□□□ 0.42
PBX3-201ENST00000342287 ANKRD36CQ5JPF3 1778 aa17.67■□□□□ 0.42
PBX3-201ENST00000342287 IRS4O14654 1257 aaPredicted RBP17.67■□□□□ 0.42
PBX3-201ENST00000342287 PARP10Q53GL7 1025 aa17.67■□□□□ 0.42
PBX3-201ENST00000342287 ZNF772Q68DY9 489 aaPredicted RBP17.67■□□□□ 0.42
PBX3-201ENST00000342287 IL15P40933 162 aaPredicted RBP17.66■□□□□ 0.42
PBX3-201ENST00000342287 CLEC4GQ6UXB4 293 aa17.66■□□□□ 0.42
PBX3-201ENST00000342287 FAM196AQ6ZSG2 479 aa17.66■□□□□ 0.42
PBX3-201ENST00000342287 CIAO1O76071 339 aa17.66■□□□□ 0.42
PBX3-201ENST00000342287 ATG9AQ7Z3C6 839 aa17.66■□□□□ 0.42
PBX3-201ENST00000342287 KRT27Q7Z3Y8 459 aa17.66■□□□□ 0.42
PBX3-201ENST00000342287 CNTROBQ8N137 903 aa17.66■□□□□ 0.42
PBX3-201ENST00000342287 EYA2O00167 538 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 TNNI3KQ59H18 835 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 AK7Q96M32 723 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 FBXO3Q9UK99 471 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 FPGT-TNNI3KV9GXZ4 949 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 PDE8AO60658 829 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 RPS6KA4O75676 772 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 CHMLP26374 656 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 CCDC173Q0VFZ6 552 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 IFIT5Q13325 482 aaKnown RBP17.65■□□□□ 0.42
PBX3-201ENST00000342287 SUSD4Q5VX71 490 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 TTLL11Q8NHH1 800 aa17.65■□□□□ 0.42
PBX3-201ENST00000342287 ZNF594Q96JF6 807 aaPredicted RBP17.65■□□□□ 0.42
PBX3-201ENST00000342287 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
PBX3-201ENST00000342287 RGL2O15211 777 aa17.64■□□□□ 0.41
PBX3-201ENST00000342287 REC8O95072 547 aa17.64■□□□□ 0.41
PBX3-201ENST00000342287 CTSWP56202 376 aa17.64■□□□□ 0.41
PBX3-201ENST00000342287 TBC1D2Q9BYX2 928 aa17.64■□□□□ 0.41
PBX3-201ENST00000342287 NIP7Q9Y221 180 aaKnown RBP eCLIP17.64■□□□□ 0.41
PBX3-201ENST00000342287 MAP4K4O95819 1239 aaPredicted RBP17.64■□□□□ 0.41
PBX3-201ENST00000342287 RBM6P78332 1123 aaKnown RBP17.63■□□□□ 0.41
PBX3-201ENST00000342287 GPR108Q9NPR9 543 aa17.63■□□□□ 0.41
PBX3-201ENST00000342287 TLR7Q9NYK1 1049 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms