RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 GRAPLQ8TC17 118 aaPredicted RBP16.96■□□□□ 0.31
NECTIN1-203ENST00000341398 TNIP1Q15025 636 aa16.95■□□□□ 0.3
NECTIN1-203ENST00000341398 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
NECTIN1-203ENST00000341398 ADARB2Q9NS39 739 aaKnown RBP16.95■□□□□ 0.3
NECTIN1-203ENST00000341398 ABT1Q9ULW3 272 aaKnown RBP16.95■□□□□ 0.3
NECTIN1-203ENST00000341398 RASSF10A6NK89 507 aa16.94■□□□□ 0.3
NECTIN1-203ENST00000341398 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
NECTIN1-203ENST00000341398 CXCL9Q07325 125 aa16.94■□□□□ 0.3
NECTIN1-203ENST00000341398 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
NECTIN1-203ENST00000341398 CIAPIN1Q6FI81 312 aa16.94■□□□□ 0.3
NECTIN1-203ENST00000341398 COL4A5P29400 1685 aa16.93■□□□□ 0.3
NECTIN1-203ENST00000341398 CTCFP49711 727 aaPredicted RBP16.93■□□□□ 0.3
NECTIN1-203ENST00000341398 KIAA2012Q0VF49 1180 aa16.93■□□□□ 0.3
NECTIN1-203ENST00000341398 BCL2L13Q9BXK5 485 aa16.93■□□□□ 0.3
NECTIN1-203ENST00000341398 PRKRIP1Q9H875 184 aaPredicted RBP16.93■□□□□ 0.3
NECTIN1-203ENST00000341398 GPRC5DQ9NZD1 345 aa16.93■□□□□ 0.3
NECTIN1-203ENST00000341398 TRPM7Q96QT4 1865 aa16.93■□□□□ 0.3
NECTIN1-203ENST00000341398 GNAI1P63096 354 aa16.92■□□□□ 0.3
NECTIN1-203ENST00000341398 RIC3Q7Z5B4 369 aa16.92■□□□□ 0.3
NECTIN1-203ENST00000341398 ISCA1Q9BUE6 129 aa16.92■□□□□ 0.3
NECTIN1-203ENST00000341398 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
NECTIN1-203ENST00000341398 TAF1P21675 1872 aa16.92■□□□□ 0.3
NECTIN1-203ENST00000341398 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 FOXN1O15353 648 aa16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 ECE1P42892 770 aa16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 MAP2K1Q02750 393 aaPredicted RBP16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 TRIM28Q13263 835 aaKnown RBP16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 SF3B3Q15393 1217 aaKnown RBP16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 FAM89AQ96GI7 184 aa16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 MBIPQ9NS73 344 aa16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 CDHR2Q9BYE9 1310 aa16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 WDR33Q9C0J8 1336 aaKnown RBP16.91■□□□□ 0.3
NECTIN1-203ENST00000341398 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
NECTIN1-203ENST00000341398 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
NECTIN1-203ENST00000341398 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
NECTIN1-203ENST00000341398 H7C1D1 291 aa16.89■□□□□ 0.3
NECTIN1-203ENST00000341398 APAF1O14727 1248 aa16.89■□□□□ 0.3
NECTIN1-203ENST00000341398 RAD17O75943 681 aa16.89■□□□□ 0.3
NECTIN1-203ENST00000341398 GMPSP49915 693 aaPredicted RBP16.89■□□□□ 0.3
NECTIN1-203ENST00000341398 WASHC4Q2M389 1173 aa16.89■□□□□ 0.3
NECTIN1-203ENST00000341398 PAXIP1Q6ZW49 1069 aaPredicted RBP16.89■□□□□ 0.3
NECTIN1-203ENST00000341398 WBP1LQ9NX94 342 aa16.89■□□□□ 0.3
NECTIN1-203ENST00000341398 NSFL1CQ9UNZ2 370 aaKnown RBP16.89■□□□□ 0.3
NECTIN1-203ENST00000341398 IRS4O14654 1257 aaPredicted RBP16.89■□□□□ 0.29
NECTIN1-203ENST00000341398 ZC3H15Q8WU90 426 aaKnown RBP16.89■□□□□ 0.29
NECTIN1-203ENST00000341398 ZNF428Q96B54 188 aa16.89■□□□□ 0.29
NECTIN1-203ENST00000341398 EYA3Q99504 573 aa16.89■□□□□ 0.29
NECTIN1-203ENST00000341398 BEGAINQ9BUH8 593 aa16.89■□□□□ 0.29
NECTIN1-203ENST00000341398 DDX60Q8IY21 1712 aaKnown RBP16.88■□□□□ 0.29
NECTIN1-203ENST00000341398 C6orf229H3BNL8 230 aa16.88■□□□□ 0.29
NECTIN1-203ENST00000341398 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
NECTIN1-203ENST00000341398 ZNF853P0CG23 659 aa16.88■□□□□ 0.29
NECTIN1-203ENST00000341398 RTL5Q5HYW3 569 aaPredicted RBP16.88■□□□□ 0.29
NECTIN1-203ENST00000341398 CNOT7Q9UIV1 285 aaKnown RBP16.88■□□□□ 0.29
NECTIN1-203ENST00000341398 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
NECTIN1-203ENST00000341398 RPS8P62241 208 aaKnown RBP16.87■□□□□ 0.29
NECTIN1-203ENST00000341398 ZBTB38Q8NAP3 1195 aaPredicted RBP16.87■□□□□ 0.29
NECTIN1-203ENST00000341398 CELF1Q92879 486 aaKnown RBP16.87■□□□□ 0.29
NECTIN1-203ENST00000341398 CCDC30Q5VVM6 783 aa16.86■□□□□ 0.29
NECTIN1-203ENST00000341398 CDC37L1Q7L3B6 337 aa16.86■□□□□ 0.29
NECTIN1-203ENST00000341398 CAPNS2Q96L46 248 aa16.86■□□□□ 0.29
NECTIN1-203ENST00000341398 PGAP2Q9UHJ9 254 aa16.86■□□□□ 0.29
NECTIN1-203ENST00000341398 G3V3G9 751 aa16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 TRAF5O00463 557 aa16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 RIMBP2O15034 1052 aa16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 DCAF8Q5TAQ9 597 aa16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 CST9Q5W186 159 aa16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 CCDC191Q8NCU4 936 aa16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 DPF2Q92785 391 aa16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 GPR101Q96P66 508 aaPredicted RBP16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 MYD88Q99836 296 aa16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 ZC3H12CQ9C0D7 883 aaKnown RBP16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 PHAXQ9H814 394 aaKnown RBP16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 TLL2Q9Y6L7 1015 aa16.85■□□□□ 0.29
NECTIN1-203ENST00000341398 LRRC37AA6NMS7 1700 aa16.84■□□□□ 0.29
NECTIN1-203ENST00000341398 CELF2O95319 508 aaKnown RBP16.84■□□□□ 0.29
NECTIN1-203ENST00000341398 LBX1P52954 281 aa16.84■□□□□ 0.29
NECTIN1-203ENST00000341398 FMR1Q06787 632 aaKnown RBP eCLIP16.84■□□□□ 0.29
NECTIN1-203ENST00000341398 GRM1Q13255 1194 aa16.84■□□□□ 0.29
NECTIN1-203ENST00000341398 CCDC152Q4G0S7 254 aa16.84■□□□□ 0.29
NECTIN1-203ENST00000341398 YDJCA8MPS7 323 aa16.83■□□□□ 0.28
NECTIN1-203ENST00000341398 PDE8AO60658 829 aa16.83■□□□□ 0.28
NECTIN1-203ENST00000341398 RPS12P25398 132 aaKnown RBP16.83■□□□□ 0.28
NECTIN1-203ENST00000341398 MAP2K2P36507 400 aa16.83■□□□□ 0.28
NECTIN1-203ENST00000341398 GPSM2P81274 684 aa16.83■□□□□ 0.28
NECTIN1-203ENST00000341398 CYP4F22Q6NT55 531 aa16.83■□□□□ 0.28
NECTIN1-203ENST00000341398 DBNDD1Q9H9R9 158 aa16.83■□□□□ 0.28
NECTIN1-203ENST00000341398 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.28
NECTIN1-203ENST00000341398 ANKIB1Q9P2G1 1089 aa16.83■□□□□ 0.28
NECTIN1-203ENST00000341398 POLLQ9UGP5 575 aa16.83■□□□□ 0.28
NECTIN1-203ENST00000341398 PSMD14O00487 310 aa16.82■□□□□ 0.28
NECTIN1-203ENST00000341398 PCCAP05165 728 aaPredicted RBP16.82■□□□□ 0.28
NECTIN1-203ENST00000341398 MICALL2Q8IY33 904 aa16.82■□□□□ 0.28
NECTIN1-203ENST00000341398 HHIPL1Q96JK4 782 aa16.82■□□□□ 0.28
NECTIN1-203ENST00000341398 GLIS2Q9BZE0 524 aaPredicted RBP16.82■□□□□ 0.28
NECTIN1-203ENST00000341398 ECE2O60344 883 aa16.81■□□□□ 0.28
NECTIN1-203ENST00000341398 HIRAP54198 1017 aaPredicted RBP16.81■□□□□ 0.28
NECTIN1-203ENST00000341398 SAPCD2Q86UD0 394 aa16.81■□□□□ 0.28
NECTIN1-203ENST00000341398 C8orf58Q8NAV2 365 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms