RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 LMBR1LQ6UX01 489 aa18.26■□□□□ 0.51
BRAT1-201ENST00000340611 PHF14O94880 888 aa18.26■□□□□ 0.51
BRAT1-201ENST00000340611 ISCA1Q9BUE6 129 aa18.26■□□□□ 0.51
BRAT1-201ENST00000340611 CCDC94Q9BW85 323 aaPredicted RBP18.26■□□□□ 0.51
BRAT1-201ENST00000340611 NUP98P52948 1817 aa18.26■□□□□ 0.51
BRAT1-201ENST00000340611 NHSQ6T4R5 1651 aa18.26■□□□□ 0.51
BRAT1-201ENST00000340611 ZNF772Q68DY9 489 aaPredicted RBP18.26■□□□□ 0.51
BRAT1-201ENST00000340611 LRRCC1Q9C099 1032 aa18.26■□□□□ 0.51
BRAT1-201ENST00000340611 CD2BP2O95400 341 aaKnown RBP18.25■□□□□ 0.51
BRAT1-201ENST00000340611 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
BRAT1-201ENST00000340611 IBTKQ9P2D0 1353 aaPredicted RBP18.25■□□□□ 0.51
BRAT1-201ENST00000340611 H7C1W4 665 aa18.25■□□□□ 0.51
BRAT1-201ENST00000340611 GNPATO15228 680 aa18.25■□□□□ 0.51
BRAT1-201ENST00000340611 CCDC173Q0VFZ6 552 aa18.25■□□□□ 0.51
BRAT1-201ENST00000340611 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
BRAT1-201ENST00000340611 ZNF594Q96JF6 807 aaPredicted RBP18.24■□□□□ 0.51
BRAT1-201ENST00000340611 SRP68Q9UHB9 627 aaKnown RBP18.24■□□□□ 0.51
BRAT1-201ENST00000340611 GSPT1P15170 499 aaKnown RBP18.24■□□□□ 0.51
BRAT1-201ENST00000340611 CDK11BP21127 795 aaKnown RBP18.24■□□□□ 0.51
BRAT1-201ENST00000340611 CCDC191Q8NCU4 936 aa18.24■□□□□ 0.51
BRAT1-201ENST00000340611 GBP4Q96PP9 640 aa18.24■□□□□ 0.51
BRAT1-201ENST00000340611 CGNQ9P2M7 1197 aaKnown RBP18.24■□□□□ 0.51
BRAT1-201ENST00000340611 RBM25P49756 843 aaKnown RBP18.23■□□□□ 0.51
BRAT1-201ENST00000340611 FOXO4P98177 505 aa18.23■□□□□ 0.51
BRAT1-201ENST00000340611 NLRP10Q86W26 655 aa18.23■□□□□ 0.51
BRAT1-201ENST00000340611 COL15A1P39059 1388 aa18.23■□□□□ 0.51
BRAT1-201ENST00000340611 RHPN1Q8TCX5 695 aa18.23■□□□□ 0.51
BRAT1-201ENST00000340611 RXRBP28702 533 aa18.22■□□□□ 0.51
BRAT1-201ENST00000340611 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
BRAT1-201ENST00000340611 COL5A3P25940 1745 aaPredicted RBP18.22■□□□□ 0.51
BRAT1-201ENST00000340611 CAMTA2O94983 1202 aa18.22■□□□□ 0.51
BRAT1-201ENST00000340611 MTX1Q13505 466 aa18.22■□□□□ 0.51
BRAT1-201ENST00000340611 RAB3GAP1Q15042 981 aa18.22■□□□□ 0.51
BRAT1-201ENST00000340611 FAM196AQ6ZSG2 479 aa18.22■□□□□ 0.51
BRAT1-201ENST00000340611 MTERF4Q7Z6M4 381 aaKnown RBP18.22■□□□□ 0.51
BRAT1-201ENST00000340611 SNX21Q969T3 373 aa18.22■□□□□ 0.51
BRAT1-201ENST00000340611 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
BRAT1-201ENST00000340611 CCDC24Q8N4L8 307 aa18.21■□□□□ 0.51
BRAT1-201ENST00000340611 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
BRAT1-201ENST00000340611 DYNC1I1O14576 645 aa18.21■□□□□ 0.51
BRAT1-201ENST00000340611 MAP4K4O95819 1239 aaPredicted RBP18.21■□□□□ 0.51
BRAT1-201ENST00000340611 TERF1P54274 439 aa18.21■□□□□ 0.51
BRAT1-201ENST00000340611 ISY1Q9ULR0 285 aaKnown RBP18.21■□□□□ 0.51
BRAT1-201ENST00000340611 SUSD4Q5VX71 490 aa18.2■□□□□ 0.5
BRAT1-201ENST00000340611 SASH1O94885 1247 aa18.2■□□□□ 0.5
BRAT1-201ENST00000340611 HCLS1P14317 486 aaPredicted RBP18.2■□□□□ 0.5
BRAT1-201ENST00000340611 SSFA2P28290 1259 aa18.2■□□□□ 0.5
BRAT1-201ENST00000340611 KIF2CQ99661 725 aa18.2■□□□□ 0.5
BRAT1-201ENST00000340611 DNTTIP2Q5QJE6 756 aaKnown RBP18.19■□□□□ 0.5
BRAT1-201ENST00000340611 NIP7Q9Y221 180 aaKnown RBP eCLIP18.19■□□□□ 0.5
BRAT1-201ENST00000340611 SPDYE4A6NLX3 237 aa18.19■□□□□ 0.5
BRAT1-201ENST00000340611 RFX5P48382 616 aaPredicted RBP18.19■□□□□ 0.5
BRAT1-201ENST00000340611 PTPN12Q05209 780 aaKnown RBP18.19■□□□□ 0.5
BRAT1-201ENST00000340611 USPL1Q5W0Q7 1092 aa18.19■□□□□ 0.5
BRAT1-201ENST00000340611 PDE1AP54750 535 aa18.19■□□□□ 0.5
BRAT1-201ENST00000340611 PROM2Q8N271 834 aa18.18■□□□□ 0.5
BRAT1-201ENST00000340611 PUS3Q9BZE2 481 aaKnown RBP18.18■□□□□ 0.5
BRAT1-201ENST00000340611 CCDC8Q9H0W5 538 aaPredicted RBP18.18■□□□□ 0.5
BRAT1-201ENST00000340611 TLR7Q9NYK1 1049 aaKnown RBP18.18■□□□□ 0.5
BRAT1-201ENST00000340611 CIZ1Q9ULV3 898 aaPredicted RBP18.18■□□□□ 0.5
BRAT1-201ENST00000340611 G3BP1Q13283 466 aaKnown RBP eCLIP18.17■□□□□ 0.5
BRAT1-201ENST00000340611 RABL6Q3YEC7 729 aaPredicted RBP18.17■□□□□ 0.5
BRAT1-201ENST00000340611 ZNF34Q8IZ26 560 aa18.17■□□□□ 0.5
BRAT1-201ENST00000340611 ZBTB38Q8NAP3 1195 aaPredicted RBP18.17■□□□□ 0.5
BRAT1-201ENST00000340611 KIF1BPQ96EK5 621 aa18.17■□□□□ 0.5
BRAT1-201ENST00000340611 ERVV-1B6SEH8 477 aa18.16■□□□□ 0.5
BRAT1-201ENST00000340611 MX1P20591 662 aa18.16■□□□□ 0.5
BRAT1-201ENST00000340611 SKOR2Q2VWA4 1001 aaPredicted RBP18.16■□□□□ 0.5
BRAT1-201ENST00000340611 LRRC24Q50LG9 513 aa18.16■□□□□ 0.5
BRAT1-201ENST00000340611 TTC22Q5TAA0 569 aa18.16■□□□□ 0.5
BRAT1-201ENST00000340611 PPP1R9BQ96SB3 815 aa18.16■□□□□ 0.5
BRAT1-201ENST00000340611 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
BRAT1-201ENST00000340611 IRS4O14654 1257 aaPredicted RBP18.16■□□□□ 0.5
BRAT1-201ENST00000340611 KIF20AO95235 890 aa18.16■□□□□ 0.5
BRAT1-201ENST00000340611 PCCAP05165 728 aaPredicted RBP18.16■□□□□ 0.5
BRAT1-201ENST00000340611 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
BRAT1-201ENST00000340611 BCL2L12Q9HB09 334 aa18.16■□□□□ 0.5
BRAT1-201ENST00000340611 LY75O60449 1722 aa18.16■□□□□ 0.5
BRAT1-201ENST00000340611 TRIM28Q13263 835 aaKnown RBP18.16■□□□□ 0.5
BRAT1-201ENST00000340611 ANKRD36CQ5JPF3 1778 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 APBA3O96018 575 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 TBC1D9BQ66K14 1250 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 CERS3Q8IU89 383 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 HDAC5Q9UQL6 1122 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 RTCBQ9Y3I0 505 aaKnown RBP18.15■□□□□ 0.5
BRAT1-201ENST00000340611 K7ELQ4 463 aaPredicted RBP18.15■□□□□ 0.5
BRAT1-201ENST00000340611 SDSP20132 328 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 TFCP2Q12800 502 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 ATP2B3Q16720 1220 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 BMP2KLQ5H9B9 411 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 AACSQ86V21 672 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
BRAT1-201ENST00000340611 GREM2Q9H772 168 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 SALL3Q9BXA9 1300 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 CNTNAP4Q9C0A0 1308 aa18.15■□□□□ 0.5
BRAT1-201ENST00000340611 RPS6KA4O75676 772 aa18.14■□□□□ 0.49
BRAT1-201ENST00000340611 HSP90AB3PQ58FF7 597 aa18.14■□□□□ 0.49
BRAT1-201ENST00000340611 AK7Q96M32 723 aa18.14■□□□□ 0.49
BRAT1-201ENST00000340611 GTPBP4Q9BZE4 634 aaKnown RBP18.14■□□□□ 0.49
BRAT1-201ENST00000340611 DDX49Q9Y6V7 483 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms