RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 WBP1LQ9NX94 342 aa21.33■■□□□ 1.01
H3F3C-201ENST00000340398 GPRC5DQ9NZD1 345 aa21.33■■□□□ 1.01
H3F3C-201ENST00000340398 CST9Q5W186 159 aa21.32■■□□□ 1
H3F3C-201ENST00000340398 ANKRD13DQ6ZTN6 518 aa21.32■■□□□ 1
H3F3C-201ENST00000340398 SUPT20HQ8NEM7 779 aa21.32■■□□□ 1
H3F3C-201ENST00000340398 PLBD2Q8NHP8 589 aa21.32■■□□□ 1
H3F3C-201ENST00000340398 WDR33Q9C0J8 1336 aaKnown RBP21.31■■□□□ 1
H3F3C-201ENST00000340398 RAD17O75943 681 aa21.31■■□□□ 1
H3F3C-201ENST00000340398 GMPSP49915 693 aaPredicted RBP21.31■■□□□ 1
H3F3C-201ENST00000340398 GRAPQ13588 217 aa21.31■■□□□ 1
H3F3C-201ENST00000340398 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
H3F3C-201ENST00000340398 GRAPLQ8TC17 118 aaPredicted RBP21.31■■□□□ 1
H3F3C-201ENST00000340398 AIDAQ96BJ3 306 aa21.31■■□□□ 1
H3F3C-201ENST00000340398 FAM89AQ96GI7 184 aa21.31■■□□□ 1
H3F3C-201ENST00000340398 DUSP27Q5VZP5 1158 aa21.3■■□□□ 1
H3F3C-201ENST00000340398 ISCA1Q9BUE6 129 aa21.3■■□□□ 1
H3F3C-201ENST00000340398 ADARB2Q9NS39 739 aaKnown RBP21.3■■□□□ 1
H3F3C-201ENST00000340398 CTCFP49711 727 aaPredicted RBP21.29■■□□□ 1
H3F3C-201ENST00000340398 LBX1P52954 281 aa21.29■■□□□ 1
H3F3C-201ENST00000340398 KIAA2012Q0VF49 1180 aa21.29■■□□□ 1
H3F3C-201ENST00000340398 CIAPIN1Q6FI81 312 aa21.29■■□□□ 1
H3F3C-201ENST00000340398 PRDM10Q9NQV6 1147 aa21.29■■□□□ 1
H3F3C-201ENST00000340398 SHTN1A0MZ66 631 aa21.28■■□□□ 1
H3F3C-201ENST00000340398 YDJCA8MPS7 323 aa21.28■■□□□ 1
H3F3C-201ENST00000340398 CELF1Q92879 486 aaKnown RBP21.28■■□□□ 1
H3F3C-201ENST00000340398 CFAP44Q96MT7 982 aa21.28■■□□□ 1
H3F3C-201ENST00000340398 DBF4Q9UBU7 674 aaPredicted RBP21.28■■□□□ 1
H3F3C-201ENST00000340398 HIRAP54198 1017 aaPredicted RBP21.27■■□□□ 1
H3F3C-201ENST00000340398 GRM1Q13255 1194 aa21.27■■□□□ 1
H3F3C-201ENST00000340398 PAXIP1Q6ZW49 1069 aaPredicted RBP21.27■■□□□ 1
H3F3C-201ENST00000340398 BCL2L13Q9BXK5 485 aa21.27■■□□□ 1
H3F3C-201ENST00000340398 MBIPQ9NS73 344 aa21.27■■□□□ 1
H3F3C-201ENST00000340398 ELL2O00472 640 aaPredicted RBP21.26■□□□□ 0.99
H3F3C-201ENST00000340398 HOXB7P09629 217 aa21.26■□□□□ 0.99
H3F3C-201ENST00000340398 CYP4F22Q6NT55 531 aa21.26■□□□□ 0.99
H3F3C-201ENST00000340398 HYPKQ9NX55 129 aa21.26■□□□□ 0.99
H3F3C-201ENST00000340398 APAF1O14727 1248 aa21.25■□□□□ 0.99
H3F3C-201ENST00000340398 RIMBP2O15034 1052 aa21.25■□□□□ 0.99
H3F3C-201ENST00000340398 SF3B3Q15393 1217 aaKnown RBP21.25■□□□□ 0.99
H3F3C-201ENST00000340398 DDX60Q8IY21 1712 aaKnown RBP21.25■□□□□ 0.99
H3F3C-201ENST00000340398 CAPNS2Q96L46 248 aa21.25■□□□□ 0.99
H3F3C-201ENST00000340398 TRPM7Q96QT4 1865 aa21.25■□□□□ 0.99
H3F3C-201ENST00000340398 GLIS2Q9BZE0 524 aaPredicted RBP21.25■□□□□ 0.99
H3F3C-201ENST00000340398 CNOT7Q9UIV1 285 aaKnown RBP21.25■□□□□ 0.99
H3F3C-201ENST00000340398 NSFL1CQ9UNZ2 370 aaKnown RBP21.25■□□□□ 0.99
H3F3C-201ENST00000340398 ZNF853P0CG23 659 aa21.24■□□□□ 0.99
H3F3C-201ENST00000340398 TNIP1Q15025 636 aa21.24■□□□□ 0.99
H3F3C-201ENST00000340398 TRPM4Q8TD43 1214 aa21.24■□□□□ 0.99
H3F3C-201ENST00000340398 PHAXQ9H814 394 aaKnown RBP21.24■□□□□ 0.99
H3F3C-201ENST00000340398 PRKRIP1Q9H875 184 aaPredicted RBP21.24■□□□□ 0.99
H3F3C-201ENST00000340398 ZBTB12Q9Y330 459 aaPredicted RBP21.24■□□□□ 0.99
H3F3C-201ENST00000340398 COL4A1P02462 1669 aa21.24■□□□□ 0.99
H3F3C-201ENST00000340398 IRS4O14654 1257 aaPredicted RBP21.23■□□□□ 0.99
H3F3C-201ENST00000340398 HSPA8P11142 646 aaKnown RBP21.23■□□□□ 0.99
H3F3C-201ENST00000340398 GPSM2P81274 684 aa21.23■□□□□ 0.99
H3F3C-201ENST00000340398 MAP2K1Q02750 393 aaPredicted RBP21.23■□□□□ 0.99
H3F3C-201ENST00000340398 GPR101Q96P66 508 aaPredicted RBP21.23■□□□□ 0.99
H3F3C-201ENST00000340398 KCNQ5Q9NR82 932 aa21.23■□□□□ 0.99
H3F3C-201ENST00000340398 POLLQ9UGP5 575 aa21.23■□□□□ 0.99
H3F3C-201ENST00000340398 PGAP2Q9UHJ9 254 aa21.23■□□□□ 0.99
H3F3C-201ENST00000340398 TLL2Q9Y6L7 1015 aa21.23■□□□□ 0.99
H3F3C-201ENST00000340398 CELF2O95319 508 aaKnown RBP21.22■□□□□ 0.99
H3F3C-201ENST00000340398 TRIM28Q13263 835 aaKnown RBP21.22■□□□□ 0.99
H3F3C-201ENST00000340398 WASHC4Q2M389 1173 aa21.22■□□□□ 0.99
H3F3C-201ENST00000340398 TMC4Q7Z404 712 aa21.22■□□□□ 0.99
H3F3C-201ENST00000340398 RIC3Q7Z5B4 369 aa21.22■□□□□ 0.99
H3F3C-201ENST00000340398 JARID2Q92833 1246 aaPredicted RBP21.22■□□□□ 0.99
H3F3C-201ENST00000340398 DBNDD1Q9H9R9 158 aa21.22■□□□□ 0.99
H3F3C-201ENST00000340398 DUOX1Q9NRD9 1551 aa21.22■□□□□ 0.99
H3F3C-201ENST00000340398 C6orf229H3BNL8 230 aa21.21■□□□□ 0.99
H3F3C-201ENST00000340398 AOC2O75106 756 aa21.21■□□□□ 0.99
H3F3C-201ENST00000340398 DOK7Q18PE1 504 aa21.21■□□□□ 0.99
H3F3C-201ENST00000340398 DLK2Q6UY11 383 aa21.21■□□□□ 0.99
H3F3C-201ENST00000340398 PSMD14O00487 310 aa21.2■□□□□ 0.98
H3F3C-201ENST00000340398 RPS8P62241 208 aaKnown RBP21.2■□□□□ 0.98
H3F3C-201ENST00000340398 C8orf58Q8NAV2 365 aa21.2■□□□□ 0.98
H3F3C-201ENST00000340398 ZNF408Q9H9D4 720 aa21.2■□□□□ 0.98
H3F3C-201ENST00000340398 SEC31BQ9NQW1 1179 aa21.2■□□□□ 0.98
H3F3C-201ENST00000340398 H7C1D1 291 aa21.19■□□□□ 0.98
H3F3C-201ENST00000340398 ECE1P42892 770 aa21.19■□□□□ 0.98
H3F3C-201ENST00000340398 SAMD7Q7Z3H4 446 aa21.19■□□□□ 0.98
H3F3C-201ENST00000340398 SAPCD2Q86UD0 394 aa21.19■□□□□ 0.98
H3F3C-201ENST00000340398 MICALL2Q8IY33 904 aa21.19■□□□□ 0.98
H3F3C-201ENST00000340398 MYD88Q99836 296 aa21.19■□□□□ 0.98
H3F3C-201ENST00000340398 USP48Q86UV5 1035 aa21.18■□□□□ 0.98
H3F3C-201ENST00000340398 ZBTB38Q8NAP3 1195 aaPredicted RBP21.18■□□□□ 0.98
H3F3C-201ENST00000340398 ZC3H15Q8WU90 426 aaKnown RBP21.18■□□□□ 0.98
H3F3C-201ENST00000340398 IFT57Q9NWB7 429 aa21.18■□□□□ 0.98
H3F3C-201ENST00000340398 POLR2AP24928 1970 aaKnown RBP21.17■□□□□ 0.98
H3F3C-201ENST00000340398 EGFRP00533 1210 aa21.17■□□□□ 0.98
H3F3C-201ENST00000340398 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
H3F3C-201ENST00000340398 TBC1D16Q8TBP0 767 aa21.17■□□□□ 0.98
H3F3C-201ENST00000340398 TSKSQ9UJT2 592 aa21.17■□□□□ 0.98
H3F3C-201ENST00000340398 LRRC37AA6NMS7 1700 aa21.17■□□□□ 0.98
H3F3C-201ENST00000340398 CDHR2Q9BYE9 1310 aa21.16■□□□□ 0.98
H3F3C-201ENST00000340398 GNAI1P63096 354 aa21.16■□□□□ 0.98
H3F3C-201ENST00000340398 TBC1D10BQ4KMP7 808 aaPredicted RBP21.16■□□□□ 0.98
H3F3C-201ENST00000340398 RBM26Q5T8P6 1007 aaKnown RBP21.16■□□□□ 0.98
H3F3C-201ENST00000340398 CDC37L1Q7L3B6 337 aa21.16■□□□□ 0.98
H3F3C-201ENST00000340398 DPF2Q92785 391 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms