RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 AK2P54819 239 aa19.64■□□□□ 0.74
LITAF-201ENST00000339430 G3BP1Q13283 466 aaKnown RBP eCLIP19.64■□□□□ 0.74
LITAF-201ENST00000339430 JARID2Q92833 1246 aaPredicted RBP19.64■□□□□ 0.74
LITAF-201ENST00000339430 RBM6P78332 1123 aaKnown RBP19.64■□□□□ 0.73
LITAF-201ENST00000339430 TTLL7Q6ZT98 887 aa19.64■□□□□ 0.73
LITAF-201ENST00000339430 EAF2Q96CJ1 260 aaPredicted RBP19.64■□□□□ 0.73
LITAF-201ENST00000339430 MYD88Q99836 296 aa19.64■□□□□ 0.73
LITAF-201ENST00000339430 TMEM63CQ9P1W3 806 aa19.64■□□□□ 0.73
LITAF-201ENST00000339430 HDAC5Q9UQL6 1122 aa19.64■□□□□ 0.73
LITAF-201ENST00000339430 TJP1Q07157 1748 aa19.64■□□□□ 0.73
LITAF-201ENST00000339430 TLR7Q9NYK1 1049 aaKnown RBP19.63■□□□□ 0.73
LITAF-201ENST00000339430 TCHHQ07283 1943 aa19.63■□□□□ 0.73
LITAF-201ENST00000339430 CASTP20810 708 aaKnown RBP19.63■□□□□ 0.73
LITAF-201ENST00000339430 TTC14Q96N46 770 aa19.63■□□□□ 0.73
LITAF-201ENST00000339430 DTNBO60941 627 aa19.62■□□□□ 0.73
LITAF-201ENST00000339430 PLBD2Q8NHP8 589 aa19.62■□□□□ 0.73
LITAF-201ENST00000339430 GDPD2Q9HCC8 539 aa19.62■□□□□ 0.73
LITAF-201ENST00000339430 UTYO14607 1347 aa19.62■□□□□ 0.73
LITAF-201ENST00000339430 NEURL1BA8MQ27 555 aa19.62■□□□□ 0.73
LITAF-201ENST00000339430 NEXNQ0ZGT2 675 aa19.62■□□□□ 0.73
LITAF-201ENST00000339430 RUFY2Q8WXA3 655 aa19.62■□□□□ 0.73
LITAF-201ENST00000339430 METTL22Q9BUU2 404 aaPredicted RBP19.62■□□□□ 0.73
LITAF-201ENST00000339430 RBSNQ9H1K0 784 aa19.62■□□□□ 0.73
LITAF-201ENST00000339430 ITPK1Q13572 414 aa19.61■□□□□ 0.73
LITAF-201ENST00000339430 PRPF40BQ6NWY9 871 aaKnown RBP19.61■□□□□ 0.73
LITAF-201ENST00000339430 RUFY3Q7L099 469 aa19.61■□□□□ 0.73
LITAF-201ENST00000339430 KRT27Q7Z3Y8 459 aa19.61■□□□□ 0.73
LITAF-201ENST00000339430 ZBTB1Q9Y2K1 713 aa19.61■□□□□ 0.73
LITAF-201ENST00000339430 NHSQ6T4R5 1651 aa19.61■□□□□ 0.73
LITAF-201ENST00000339430 BRWD3Q6RI45 1802 aa19.61■□□□□ 0.73
LITAF-201ENST00000339430 SYCE3A1L190 88 aa19.61■□□□□ 0.73
LITAF-201ENST00000339430 EPHA10Q5JZY3 1008 aa19.61■□□□□ 0.73
LITAF-201ENST00000339430 EVI5LQ96CN4 794 aa19.61■□□□□ 0.73
LITAF-201ENST00000339430 ZBTB3Q9H5J0 574 aa19.61■□□□□ 0.73
LITAF-201ENST00000339430 BTAF1O14981 1849 aa19.6■□□□□ 0.73
LITAF-201ENST00000339430 ESPNB1AK53 854 aa19.6■□□□□ 0.73
LITAF-201ENST00000339430 ADCK5Q3MIX3 580 aa19.6■□□□□ 0.73
LITAF-201ENST00000339430 FAM227BQ96M60 508 aa19.6■□□□□ 0.73
LITAF-201ENST00000339430 CCDC173Q0VFZ6 552 aa19.59■□□□□ 0.73
LITAF-201ENST00000339430 GCKRQ14397 625 aa19.59■□□□□ 0.73
LITAF-201ENST00000339430 ANP32BQ92688 251 aaKnown RBP19.59■□□□□ 0.73
LITAF-201ENST00000339430 BOLA2Q9H3K6 86 aa19.59■□□□□ 0.73
LITAF-201ENST00000339430 EP400Q96L91 3159 aa19.59■□□□□ 0.73
LITAF-201ENST00000339430 ARFGEF2Q9Y6D5 1785 aa19.59■□□□□ 0.73
LITAF-201ENST00000339430 CLCN1P35523 988 aa19.59■□□□□ 0.73
LITAF-201ENST00000339430 KCNQ4P56696 695 aa19.59■□□□□ 0.73
LITAF-201ENST00000339430 JAKMIP1Q96N16 626 aaKnown RBP19.59■□□□□ 0.73
LITAF-201ENST00000339430 RPAP1Q9BWH6 1393 aaPredicted RBP19.59■□□□□ 0.73
LITAF-201ENST00000339430 SBF2Q86WG5 1849 aa19.59■□□□□ 0.73
LITAF-201ENST00000339430 LARGE1O95461 756 aa19.58■□□□□ 0.73
LITAF-201ENST00000339430 LIMCH1Q9UPQ0 1083 aa19.58■□□□□ 0.73
LITAF-201ENST00000339430 WDR33Q9C0J8 1336 aaKnown RBP19.58■□□□□ 0.73
LITAF-201ENST00000339430 ATP5J2-PTCD1G3V325 749 aa19.58■□□□□ 0.72
LITAF-201ENST00000339430 CRKLP46109 303 aaKnown RBP19.57■□□□□ 0.72
LITAF-201ENST00000339430 NMIQ13287 307 aaPredicted RBP19.57■□□□□ 0.72
LITAF-201ENST00000339430 TPRNQ4KMQ1 711 aa19.57■□□□□ 0.72
LITAF-201ENST00000339430 GADD45BO75293 160 aaPredicted RBP19.57■□□□□ 0.72
LITAF-201ENST00000339430 MBD3O95983 291 aa19.57■□□□□ 0.72
LITAF-201ENST00000339430 RXRBP28702 533 aa19.57■□□□□ 0.72
LITAF-201ENST00000339430 INTS5Q6P9B9 1019 aaKnown RBP19.57■□□□□ 0.72
LITAF-201ENST00000339430 CCDC87Q9NVE4 849 aa19.57■□□□□ 0.72
LITAF-201ENST00000339430 RGS17Q9UGC6 210 aaPredicted RBP19.57■□□□□ 0.72
LITAF-201ENST00000339430 AFDNP55196 1824 aaKnown RBP19.57■□□□□ 0.72
LITAF-201ENST00000339430 CCDC171Q6TFL3 1326 aa19.56■□□□□ 0.72
LITAF-201ENST00000339430 KCNJ4P48050 445 aa19.56■□□□□ 0.72
LITAF-201ENST00000339430 FAM196AQ6ZSG2 479 aa19.56■□□□□ 0.72
LITAF-201ENST00000339430 PPP1R9BQ96SB3 815 aa19.56■□□□□ 0.72
LITAF-201ENST00000339430 KIF6Q6ZMV9 814 aa19.56■□□□□ 0.72
LITAF-201ENST00000339430 NUP188Q5SRE5 1749 aa19.55■□□□□ 0.72
LITAF-201ENST00000339430 IL6STP40189 918 aaPredicted RBP19.55■□□□□ 0.72
LITAF-201ENST00000339430 LRSAM1Q6UWE0 723 aa19.55■□□□□ 0.72
LITAF-201ENST00000339430 CCDC83Q8IWF9 413 aa19.55■□□□□ 0.72
LITAF-201ENST00000339430 FSD1Q9BTV5 496 aa19.55■□□□□ 0.72
LITAF-201ENST00000339430 BCL11BQ9C0K0 894 aaPredicted RBP19.55■□□□□ 0.72
LITAF-201ENST00000339430 PDRG1Q9NUG6 133 aa19.55■□□□□ 0.72
LITAF-201ENST00000339430 RBM8AQ9Y5S9 174 aaKnown RBP19.55■□□□□ 0.72
LITAF-201ENST00000339430 USP48Q86UV5 1035 aa19.55■□□□□ 0.72
LITAF-201ENST00000339430 EDC3Q96F86 508 aaKnown RBP19.55■□□□□ 0.72
LITAF-201ENST00000339430 SMC3Q9UQE7 1217 aa19.55■□□□□ 0.72
LITAF-201ENST00000339430 A0A0D9SFI3 127 aa19.54■□□□□ 0.72
LITAF-201ENST00000339430 NECTIN1Q15223 517 aa19.54■□□□□ 0.72
LITAF-201ENST00000339430 UBE3BQ7Z3V4 1068 aa19.54■□□□□ 0.72
LITAF-201ENST00000339430 CICQ96RK0 1608 aaPredicted RBP19.54■□□□□ 0.72
LITAF-201ENST00000339430 LINC00116Q8NCU8 138 aa19.54■□□□□ 0.72
LITAF-201ENST00000339430 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.54■□□□□ 0.72
LITAF-201ENST00000339430 CYP46A1Q9Y6A2 500 aa19.54■□□□□ 0.72
LITAF-201ENST00000339430 SYT1P21579 422 aa19.53■□□□□ 0.72
LITAF-201ENST00000339430 COL9A3Q14050 684 aaPredicted RBP19.53■□□□□ 0.72
LITAF-201ENST00000339430 CREB3L3Q68CJ9 461 aa19.53■□□□□ 0.72
LITAF-201ENST00000339430 MYH14Q7Z406 1995 aaKnown RBP19.53■□□□□ 0.72
LITAF-201ENST00000339430 EIF5P55010 431 aaKnown RBP19.52■□□□□ 0.72
LITAF-201ENST00000339430 ZSWIM6Q9HCJ5 1215 aa19.52■□□□□ 0.72
LITAF-201ENST00000339430 CCNL1Q9UK58 526 aaPredicted RBP19.52■□□□□ 0.72
LITAF-201ENST00000339430 TBC1D2BQ9UPU7 963 aa19.52■□□□□ 0.72
LITAF-201ENST00000339430 CNPY2Q9Y2B0 182 aa19.52■□□□□ 0.72
LITAF-201ENST00000339430 MAP3K15Q6ZN16 1313 aa19.52■□□□□ 0.72
LITAF-201ENST00000339430 ZNF831Q5JPB2 1677 aa19.52■□□□□ 0.72
LITAF-201ENST00000339430 STX6O43752 255 aa19.52■□□□□ 0.72
LITAF-201ENST00000339430 TRIM37O94972 964 aa19.52■□□□□ 0.72
LITAF-201ENST00000339430 ZSCAN22P10073 491 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms