RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 DNAI1Q9UI46 699 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 USP27XA6NNY8 438 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 SMC2O95347 1197 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 SYT1P21579 422 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 FLIIQ13045 1269 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 CCDC102AQ96A19 550 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 LRRCC1Q9C099 1032 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 SNX14Q9Y5W7 946 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 KDM4FA0A1W2PPD8 638 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 ZSCAN22P10073 491 aaPredicted RBP10.85□□□□□ -0.67
RPGR-202ENST00000339363 RDXP35241 583 aaKnown RBP10.85□□□□□ -0.67
RPGR-202ENST00000339363 MMP14P50281 582 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 PI4K2BQ8TCG2 481 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 KIF1BPQ96EK5 621 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 ARFGAP3Q9NP61 516 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 KCNQ3O43525 872 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 CWC27Q6UX04 472 aaKnown RBP10.85□□□□□ -0.67
RPGR-202ENST00000339363 CBX8Q9HC52 389 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 SUFUQ9UMX1 484 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 USP16Q9Y5T5 823 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 CCDC61Q9Y6R9 512 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 ROBO2Q9HCK4 1378 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 NRXN3Q9Y4C0 1643 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 ACEP12821 1306 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 PHACTR2O75167 634 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 FBXO18Q8NFZ0 1043 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 TTC14Q96N46 770 aa10.85□□□□□ -0.67
RPGR-202ENST00000339363 A2ML1A8K2U0 1454 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 REREQ9P2R6 1566 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 USP8P40818 1118 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 ARID5BQ14865 1188 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 FMNL2Q96PY5 1086 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 EYA1Q99502 592 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 FUCA2Q9BTY2 467 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 AATKQ6ZMQ8 1374 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 RICTORQ6R327 1708 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 MUM1L1Q5H9M0 696 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 LRCH2Q5VUJ6 765 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 ZSWIM4Q9H7M6 989 aa10.84□□□□□ -0.67
RPGR-202ENST00000339363 NEMFO60524 1076 aa10.83□□□□□ -0.67
RPGR-202ENST00000339363 PPFIA3O75145 1194 aa10.83□□□□□ -0.67
RPGR-202ENST00000339363 GNAI2P04899 355 aa10.83□□□□□ -0.67
RPGR-202ENST00000339363 ATP2B1P20020 1258 aa10.83□□□□□ -0.67
RPGR-202ENST00000339363 KRT85P78386 507 aa10.83□□□□□ -0.67
RPGR-202ENST00000339363 RPAINQ86UA6 219 aa10.83□□□□□ -0.67
RPGR-202ENST00000339363 IL17REQ8NFR9 667 aa10.83□□□□□ -0.67
RPGR-202ENST00000339363 TTC21BQ7Z4L5 1316 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 KIF24Q5T7B8 1368 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 HSPA4P34932 840 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 PLA2G4AP47712 749 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 DNAJC21Q5F1R6 531 aaKnown RBP10.83□□□□□ -0.68
RPGR-202ENST00000339363 DACT1Q9NYF0 836 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 ACTN2P35609 894 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 MAGEA9P43362 315 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 CCDC83Q8IWF9 413 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 LSG1Q9H089 658 aaKnown RBP10.83□□□□□ -0.68
RPGR-202ENST00000339363 ZNF446Q9NWS9 450 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 PTPRCP08575 1304 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 C3P01024 1663 aa10.83□□□□□ -0.68
RPGR-202ENST00000339363 PPP1R42Q7Z4L9 355 aa10.82□□□□□ -0.68
RPGR-202ENST00000339363 LTV1Q96GA3 475 aaPredicted RBP10.82□□□□□ -0.68
RPGR-202ENST00000339363 ATP8B2P98198 1209 aa10.82□□□□□ -0.68
RPGR-202ENST00000339363 SLFNL1Q499Z3 407 aa10.82□□□□□ -0.68
RPGR-202ENST00000339363 INTS4Q96HW7 963 aaKnown RBP10.82□□□□□ -0.68
RPGR-202ENST00000339363 CARD6Q9BX69 1037 aa10.82□□□□□ -0.68
RPGR-202ENST00000339363 TFIP11Q9UBB9 837 aaKnown RBP10.82□□□□□ -0.68
RPGR-202ENST00000339363 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
RPGR-202ENST00000339363 EIF3CLB5ME19 914 aaKnown RBP10.82□□□□□ -0.68
RPGR-202ENST00000339363 F13A1P00488 732 aa10.82□□□□□ -0.68
RPGR-202ENST00000339363 EVCP57679 992 aa10.82□□□□□ -0.68
RPGR-202ENST00000339363 LRRC8AQ8IWT6 810 aa10.82□□□□□ -0.68
RPGR-202ENST00000339363 EIF3CQ99613 913 aaKnown RBP10.82□□□□□ -0.68
RPGR-202ENST00000339363 PLEKHA4Q9H4M7 779 aa10.82□□□□□ -0.68
RPGR-202ENST00000339363 PA2G4Q9UQ80 394 aaKnown RBP10.82□□□□□ -0.68
RPGR-202ENST00000339363 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.82□□□□□ -0.68
RPGR-202ENST00000339363 FHOD1Q9Y613 1164 aa10.82□□□□□ -0.68
RPGR-202ENST00000339363 LIG1P18858 919 aa10.81□□□□□ -0.68
RPGR-202ENST00000339363 MCTP2Q6DN12 878 aa10.81□□□□□ -0.68
RPGR-202ENST00000339363 PACS2Q86VP3 889 aa10.81□□□□□ -0.68
RPGR-202ENST00000339363 ADAM21Q9UKJ8 722 aa10.81□□□□□ -0.68
RPGR-202ENST00000339363 NDUFB9Q9Y6M9 179 aa10.81□□□□□ -0.68
RPGR-202ENST00000339363 TPM1P09493 284 aa10.81□□□□□ -0.68
RPGR-202ENST00000339363 SFPQP23246 707 aaKnown RBP eCLIP10.81□□□□□ -0.68
RPGR-202ENST00000339363 CEBPZQ03701 1054 aaKnown RBP10.81□□□□□ -0.68
RPGR-202ENST00000339363 SATB1Q01826 763 aa10.81□□□□□ -0.68
RPGR-202ENST00000339363 SURF6O75683 361 aaKnown RBP10.8□□□□□ -0.68
RPGR-202ENST00000339363 EIF3JO75822 258 aaKnown RBP10.8□□□□□ -0.68
RPGR-202ENST00000339363 DHX8Q14562 1220 aaKnown RBP10.8□□□□□ -0.68
RPGR-202ENST00000339363 CCDC144BQ3MJ40 725 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 SPATA32Q96LK8 384 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 SRRTQ9BXP5 876 aaKnown RBP10.8□□□□□ -0.68
RPGR-202ENST00000339363 SGSM2O43147 1006 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 HMMRO75330 724 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 ME3Q16798 604 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 ISM2Q6H9L7 571 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 EPC1Q9H2F5 836 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 HYPKQ9NX55 129 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 STAP2Q9UGK3 403 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 EIF2S2P20042 333 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms