RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ZNF853P0CG23 659 aa25.15■■□□□ 1.62
ITGA4-202ENST00000339307 EPS15P42566 896 aa25.15■■□□□ 1.62
ITGA4-202ENST00000339307 COL13A1Q5TAT6 717 aaPredicted RBP25.15■■□□□ 1.62
ITGA4-202ENST00000339307 ISCA1Q9BUE6 129 aa25.15■■□□□ 1.62
ITGA4-202ENST00000339307 PHAXQ9H814 394 aaKnown RBP25.15■■□□□ 1.62
ITGA4-202ENST00000339307 VPS33BQ9H267 617 aa25.14■■□□□ 1.62
ITGA4-202ENST00000339307 ZNRF3Q9ULT6 936 aa25.13■■□□□ 1.61
ITGA4-202ENST00000339307 SCNN1DP51172 638 aa25.12■■□□□ 1.61
ITGA4-202ENST00000339307 RTFDC1Q9BY42 306 aaPredicted RBP25.12■■□□□ 1.61
ITGA4-202ENST00000339307 C8orf58Q8NAV2 365 aa25.12■■□□□ 1.61
ITGA4-202ENST00000339307 TAF1P21675 1872 aa25.11■■□□□ 1.61
ITGA4-202ENST00000339307 IRS4O14654 1257 aaPredicted RBP25.11■■□□□ 1.61
ITGA4-202ENST00000339307 CXCL9Q07325 125 aa25.11■■□□□ 1.61
ITGA4-202ENST00000339307 TMC4Q7Z404 712 aa25.11■■□□□ 1.61
ITGA4-202ENST00000339307 MYD88Q99836 296 aa25.11■■□□□ 1.61
ITGA4-202ENST00000339307 CCDC184Q52MB2 194 aa25.1■■□□□ 1.61
ITGA4-202ENST00000339307 CELF1Q92879 486 aaKnown RBP25.1■■□□□ 1.61
ITGA4-202ENST00000339307 BCL2L13Q9BXK5 485 aa25.1■■□□□ 1.61
ITGA4-202ENST00000339307 NSFL1CQ9UNZ2 370 aaKnown RBP25.1■■□□□ 1.61
ITGA4-202ENST00000339307 CNTNAP1P78357 1384 aa25.09■■□□□ 1.61
ITGA4-202ENST00000339307 RAD17O75943 681 aa25.09■■□□□ 1.61
ITGA4-202ENST00000339307 KIAA2012Q0VF49 1180 aa25.09■■□□□ 1.61
ITGA4-202ENST00000339307 CIAPIN1Q6FI81 312 aa25.09■■□□□ 1.61
ITGA4-202ENST00000339307 ABT1Q9ULW3 272 aaKnown RBP25.09■■□□□ 1.61
ITGA4-202ENST00000339307 SF3B3Q15393 1217 aaKnown RBP25.08■■□□□ 1.61
ITGA4-202ENST00000339307 CCDC30Q5VVM6 783 aa25.08■■□□□ 1.61
ITGA4-202ENST00000339307 USP50Q70EL3 339 aaPredicted RBP25.08■■□□□ 1.61
ITGA4-202ENST00000339307 LTBP1Q14766 1721 aa25.08■■□□□ 1.61
ITGA4-202ENST00000339307 ADAMTSL1Q8N6G6 1762 aa25.07■■□□□ 1.6
ITGA4-202ENST00000339307 DDX60Q8IY21 1712 aaKnown RBP25.07■■□□□ 1.6
ITGA4-202ENST00000339307 C6orf229H3BNL8 230 aa25.07■■□□□ 1.6
ITGA4-202ENST00000339307 GMPSP49915 693 aaPredicted RBP25.07■■□□□ 1.6
ITGA4-202ENST00000339307 TNIP1Q15025 636 aa25.07■■□□□ 1.6
ITGA4-202ENST00000339307 CHMP4AQ9BY43 222 aa25.07■■□□□ 1.6
ITGA4-202ENST00000339307 GPRC5DQ9NZD1 345 aa25.07■■□□□ 1.6
ITGA4-202ENST00000339307 RIMBP2O15034 1052 aa25.06■■□□□ 1.6
ITGA4-202ENST00000339307 DDX58O95786 925 aaKnown RBP25.06■■□□□ 1.6
ITGA4-202ENST00000339307 VEGFBP49765 207 aa25.06■■□□□ 1.6
ITGA4-202ENST00000339307 TRIM28Q13263 835 aaKnown RBP25.06■■□□□ 1.6
ITGA4-202ENST00000339307 TNS4Q8IZW8 715 aa25.06■■□□□ 1.6
ITGA4-202ENST00000339307 TSR2Q969E8 191 aaKnown RBP25.06■■□□□ 1.6
ITGA4-202ENST00000339307 ADARB2Q9NS39 739 aaKnown RBP25.06■■□□□ 1.6
ITGA4-202ENST00000339307 WASHC4Q2M389 1173 aa25.05■■□□□ 1.6
ITGA4-202ENST00000339307 ZBTB38Q8NAP3 1195 aaPredicted RBP25.05■■□□□ 1.6
ITGA4-202ENST00000339307 JARID2Q92833 1246 aaPredicted RBP25.05■■□□□ 1.6
ITGA4-202ENST00000339307 PCNTO95613 3336 aa25.05■■□□□ 1.6
ITGA4-202ENST00000339307 HSP90B1P14625 803 aaKnown RBP25.04■■□□□ 1.6
ITGA4-202ENST00000339307 DEFB115Q30KQ5 88 aa25.04■■□□□ 1.6
ITGA4-202ENST00000339307 TSPYL6Q8N831 410 aa25.04■■□□□ 1.6
ITGA4-202ENST00000339307 CAPN15O75808 1086 aa25.03■■□□□ 1.6
ITGA4-202ENST00000339307 GPSM2P81274 684 aa25.03■■□□□ 1.6
ITGA4-202ENST00000339307 FMR1Q06787 632 aaKnown RBP eCLIP25.03■■□□□ 1.6
ITGA4-202ENST00000339307 PAXIP1Q6ZW49 1069 aaPredicted RBP25.03■■□□□ 1.6
ITGA4-202ENST00000339307 CCDC85AQ96PX6 553 aaPredicted RBP25.03■■□□□ 1.6
ITGA4-202ENST00000339307 CWC25Q9NXE8 425 aaPredicted RBP25.03■■□□□ 1.6
ITGA4-202ENST00000339307 RPS8P62241 208 aaKnown RBP25.03■■□□□ 1.6
ITGA4-202ENST00000339307 STK31Q9BXU1 1019 aa25.03■■□□□ 1.6
ITGA4-202ENST00000339307 DBNDD1Q9H9R9 158 aa25.03■■□□□ 1.6
ITGA4-202ENST00000339307 TRAF5O00463 557 aa25.02■■□□□ 1.6
ITGA4-202ENST00000339307 CCDC191Q8NCU4 936 aa25.02■■□□□ 1.6
ITGA4-202ENST00000339307 AIDAQ96BJ3 306 aa25.02■■□□□ 1.6
ITGA4-202ENST00000339307 MRS2Q9HD23 443 aa25.02■■□□□ 1.6
ITGA4-202ENST00000339307 SEC31BQ9NQW1 1179 aa25.02■■□□□ 1.6
ITGA4-202ENST00000339307 MAP3K2Q9Y2U5 619 aa25.02■■□□□ 1.6
ITGA4-202ENST00000339307 YDJCA8MPS7 323 aa25.01■■□□□ 1.59
ITGA4-202ENST00000339307 GRM1Q13255 1194 aa25.01■■□□□ 1.59
ITGA4-202ENST00000339307 METTL22Q9BUU2 404 aaPredicted RBP25.01■■□□□ 1.59
ITGA4-202ENST00000339307 SALL2Q9Y467 1007 aaPredicted RBP25.01■■□□□ 1.59
ITGA4-202ENST00000339307 G3V3G9 751 aa25■■□□□ 1.59
ITGA4-202ENST00000339307 PCCAP05165 728 aaPredicted RBP25■■□□□ 1.59
ITGA4-202ENST00000339307 DOK7Q18PE1 504 aa25■■□□□ 1.59
ITGA4-202ENST00000339307 DCAF8Q5TAQ9 597 aa25■■□□□ 1.59
ITGA4-202ENST00000339307 EYA3Q99504 573 aa25■■□□□ 1.59
ITGA4-202ENST00000339307 ANKIB1Q9P2G1 1089 aa25■■□□□ 1.59
ITGA4-202ENST00000339307 POLLQ9UGP5 575 aa25■■□□□ 1.59
ITGA4-202ENST00000339307 CNOT7Q9UIV1 285 aaKnown RBP25■■□□□ 1.59
ITGA4-202ENST00000339307 H7C1D1 291 aa24.99■■□□□ 1.59
ITGA4-202ENST00000339307 ANP32CO43423 234 aa24.99■■□□□ 1.59
ITGA4-202ENST00000339307 CCDC152Q4G0S7 254 aa24.99■■□□□ 1.59
ITGA4-202ENST00000339307 WWC1Q8IX03 1113 aa24.99■■□□□ 1.59
ITGA4-202ENST00000339307 GPR101Q96P66 508 aaPredicted RBP24.99■■□□□ 1.59
ITGA4-202ENST00000339307 ZBTB12Q9Y330 459 aaPredicted RBP24.99■■□□□ 1.59
ITGA4-202ENST00000339307 RASSF10A6NK89 507 aa24.98■■□□□ 1.59
ITGA4-202ENST00000339307 PDE8AO60658 829 aa24.98■■□□□ 1.59
ITGA4-202ENST00000339307 DUOX1Q9NRD9 1551 aa24.97■■□□□ 1.59
ITGA4-202ENST00000339307 PI4KAP2A4QPH2 592 aa24.97■■□□□ 1.59
ITGA4-202ENST00000339307 FOXN1O15353 648 aa24.97■■□□□ 1.59
ITGA4-202ENST00000339307 NEXNQ0ZGT2 675 aa24.97■■□□□ 1.59
ITGA4-202ENST00000339307 TWISTNBQ3B726 338 aaPredicted RBP24.97■■□□□ 1.59
ITGA4-202ENST00000339307 KSR2Q6VAB6 950 aa24.97■■□□□ 1.59
ITGA4-202ENST00000339307 PI4KAP1Q8N8J0 262 aa24.97■■□□□ 1.59
ITGA4-202ENST00000339307 LRRC37AA6NMS7 1700 aa24.97■■□□□ 1.59
ITGA4-202ENST00000339307 PSMD14O00487 310 aa24.96■■□□□ 1.59
ITGA4-202ENST00000339307 ECE2O60344 883 aa24.96■■□□□ 1.59
ITGA4-202ENST00000339307 CCDC27Q2M243 656 aa24.96■■□□□ 1.59
ITGA4-202ENST00000339307 MICALL2Q8IY33 904 aa24.96■■□□□ 1.59
ITGA4-202ENST00000339307 TBC1D16Q8TBP0 767 aa24.96■■□□□ 1.59
ITGA4-202ENST00000339307 ZC3H12CQ9C0D7 883 aaKnown RBP24.96■■□□□ 1.59
ITGA4-202ENST00000339307 COL4A1P02462 1669 aa24.96■■□□□ 1.59
ITGA4-202ENST00000339307 CDHR2Q9BYE9 1310 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms