RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PHF14O94880 888 aa13.48□□□□□ -0.25
LRP1-202ENST00000338962 CAMTA2O94983 1202 aa13.48□□□□□ -0.25
LRP1-202ENST00000338962 RFC4P35249 363 aa13.48□□□□□ -0.25
LRP1-202ENST00000338962 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
LRP1-202ENST00000338962 SIL1Q9H173 461 aa13.48□□□□□ -0.25
LRP1-202ENST00000338962 ANO2Q9NQ90 1003 aa13.48□□□□□ -0.25
LRP1-202ENST00000338962 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
LRP1-202ENST00000338962 ZNF330Q9Y3S2 320 aaPredicted RBP13.48□□□□□ -0.25
LRP1-202ENST00000338962 MAP3K15Q6ZN16 1313 aa13.48□□□□□ -0.25
LRP1-202ENST00000338962 AFDNP55196 1824 aaKnown RBP13.47□□□□□ -0.25
LRP1-202ENST00000338962 MAP4K4O95819 1239 aaPredicted RBP13.47□□□□□ -0.25
LRP1-202ENST00000338962 MCCP23508 829 aa13.47□□□□□ -0.25
LRP1-202ENST00000338962 CLEC4GQ6UXB4 293 aa13.47□□□□□ -0.25
LRP1-202ENST00000338962 AACSQ86V21 672 aa13.47□□□□□ -0.25
LRP1-202ENST00000338962 ST18O60284 1047 aa13.47□□□□□ -0.25
LRP1-202ENST00000338962 EPHA10Q5JZY3 1008 aa13.47□□□□□ -0.25
LRP1-202ENST00000338962 SLC16A10Q8TF71 515 aa13.47□□□□□ -0.25
LRP1-202ENST00000338962 ZPR1O75312 459 aa13.46□□□□□ -0.25
LRP1-202ENST00000338962 SASH1O94885 1247 aa13.46□□□□□ -0.25
LRP1-202ENST00000338962 R3HDM1Q15032 1099 aaKnown RBP13.46□□□□□ -0.25
LRP1-202ENST00000338962 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
LRP1-202ENST00000338962 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
LRP1-202ENST00000338962 BCL2L12Q9HB09 334 aa13.46□□□□□ -0.25
LRP1-202ENST00000338962 GYS1P13807 737 aa13.45□□□□□ -0.26
LRP1-202ENST00000338962 GIGYF2Q6Y7W6 1299 aaKnown RBP13.45□□□□□ -0.26
LRP1-202ENST00000338962 UBR3Q6ZT12 1888 aa13.45□□□□□ -0.26
LRP1-202ENST00000338962 KLHDC4Q8TBB5 520 aa13.45□□□□□ -0.26
LRP1-202ENST00000338962 ZBTB3Q9H5J0 574 aa13.45□□□□□ -0.26
LRP1-202ENST00000338962 CWC25Q9NXE8 425 aaPredicted RBP13.45□□□□□ -0.26
LRP1-202ENST00000338962 SRP68Q9UHB9 627 aaKnown RBP13.45□□□□□ -0.26
LRP1-202ENST00000338962 AK9Q5TCS8 1911 aa13.45□□□□□ -0.26
LRP1-202ENST00000338962 RABL6Q3YEC7 729 aaPredicted RBP13.45□□□□□ -0.26
LRP1-202ENST00000338962 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
LRP1-202ENST00000338962 PDGFDQ9GZP0 370 aaPredicted RBP13.45□□□□□ -0.26
LRP1-202ENST00000338962 COPRSQ9NQ92 184 aa13.45□□□□□ -0.26
LRP1-202ENST00000338962 HLFQ16534 295 aa13.44□□□□□ -0.26
LRP1-202ENST00000338962 ARXQ96QS3 562 aa13.44□□□□□ -0.26
LRP1-202ENST00000338962 CIZ1Q9ULV3 898 aaPredicted RBP13.44□□□□□ -0.26
LRP1-202ENST00000338962 EPB41L2O43491 1005 aaKnown RBP13.44□□□□□ -0.26
LRP1-202ENST00000338962 DDIT3P35638 169 aa13.44□□□□□ -0.26
LRP1-202ENST00000338962 NLGN1Q8N2Q7 840 aa13.44□□□□□ -0.26
LRP1-202ENST00000338962 EAF2Q96CJ1 260 aaPredicted RBP13.44□□□□□ -0.26
LRP1-202ENST00000338962 ZNF652Q9Y2D9 606 aa13.44□□□□□ -0.26
LRP1-202ENST00000338962 CASP7P55210 303 aa13.43□□□□□ -0.26
LRP1-202ENST00000338962 ANAPC15P60006 121 aa13.43□□□□□ -0.26
LRP1-202ENST00000338962 TCIRG1Q13488 830 aa13.43□□□□□ -0.26
LRP1-202ENST00000338962 GSE1Q14687 1217 aa13.43□□□□□ -0.26
LRP1-202ENST00000338962 CCDC191Q8NCU4 936 aa13.43□□□□□ -0.26
LRP1-202ENST00000338962 TRIM28Q13263 835 aaKnown RBP13.42□□□□□ -0.26
LRP1-202ENST00000338962 HSP90AB3PQ58FF7 597 aa13.42□□□□□ -0.26
LRP1-202ENST00000338962 QSER1Q2KHR3 1735 aa13.42□□□□□ -0.26
LRP1-202ENST00000338962 H7C1W4 665 aa13.42□□□□□ -0.26
LRP1-202ENST00000338962 SGSM2O43147 1006 aa13.42□□□□□ -0.26
LRP1-202ENST00000338962 TM4SF1P30408 202 aa13.42□□□□□ -0.26
LRP1-202ENST00000338962 PTPN12Q05209 780 aaKnown RBP13.42□□□□□ -0.26
LRP1-202ENST00000338962 ZNF34Q8IZ26 560 aa13.42□□□□□ -0.26
LRP1-202ENST00000338962 CCDC8Q9H0W5 538 aaPredicted RBP13.42□□□□□ -0.26
LRP1-202ENST00000338962 DIAPH3Q9NSV4 1193 aa13.42□□□□□ -0.26
LRP1-202ENST00000338962 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
LRP1-202ENST00000338962 CHMP3Q9Y3E7 222 aa13.42□□□□□ -0.26
LRP1-202ENST00000338962 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.42□□□□□ -0.26
LRP1-202ENST00000338962 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
LRP1-202ENST00000338962 RFX5P48382 616 aaPredicted RBP13.41□□□□□ -0.26
LRP1-202ENST00000338962 LMBR1LQ6UX01 489 aa13.41□□□□□ -0.26
LRP1-202ENST00000338962 CWC27Q6UX04 472 aaKnown RBP13.41□□□□□ -0.26
LRP1-202ENST00000338962 EVI5LQ96CN4 794 aa13.41□□□□□ -0.26
LRP1-202ENST00000338962 ISCA1Q9BUE6 129 aa13.41□□□□□ -0.26
LRP1-202ENST00000338962 IL25Q9H293 177 aa13.41□□□□□ -0.26
LRP1-202ENST00000338962 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
LRP1-202ENST00000338962 RUFY2Q8WXA3 655 aa13.41□□□□□ -0.26
LRP1-202ENST00000338962 MTFR1LQ9H019 292 aa13.41□□□□□ -0.26
LRP1-202ENST00000338962 NEK4P51957 841 aa13.4□□□□□ -0.26
LRP1-202ENST00000338962 TBC1D9BQ66K14 1250 aa13.4□□□□□ -0.26
LRP1-202ENST00000338962 TLR7Q9NYK1 1049 aaKnown RBP13.4□□□□□ -0.26
LRP1-202ENST00000338962 PALD1Q9ULE6 856 aa13.4□□□□□ -0.26
LRP1-202ENST00000338962 RAD50Q92878 1312 aa13.4□□□□□ -0.26
LRP1-202ENST00000338962 FOXO4P98177 505 aa13.39□□□□□ -0.27
LRP1-202ENST00000338962 NFIXQ14938 502 aa13.39□□□□□ -0.27
LRP1-202ENST00000338962 MCM4P33991 863 aa13.39□□□□□ -0.27
LRP1-202ENST00000338962 HIP1O00291 1037 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 HSPA4P34932 840 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 MCM2P49736 904 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 TFCP2Q12800 502 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 PARP10Q53GL7 1025 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 TNNI3KQ59H18 835 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 SETDB2Q96T68 719 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 NIP7Q9Y221 180 aaKnown RBP eCLIP13.38□□□□□ -0.275e-6■■□□□ 13.5
LRP1-202ENST00000338962 FPGT-TNNI3KV9GXZ4 949 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 NLRP10Q86W26 655 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 C4AP0C0L4 1744 aa13.38□□□□□ -0.27
LRP1-202ENST00000338962 UBN2Q6ZU65 1347 aa13.37□□□□□ -0.27
LRP1-202ENST00000338962 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
LRP1-202ENST00000338962 RAB3GAP1Q15042 981 aa13.37□□□□□ -0.27
LRP1-202ENST00000338962 IL17RAQ96F46 866 aa13.37□□□□□ -0.27
LRP1-202ENST00000338962 SGIP1Q9BQI5 828 aa13.37□□□□□ -0.27
LRP1-202ENST00000338962 LSG1Q9H089 658 aaKnown RBP13.37□□□□□ -0.27
LRP1-202ENST00000338962 DBNLQ9UJU6 430 aaKnown RBP13.37□□□□□ -0.27
LRP1-202ENST00000338962 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
LRP1-202ENST00000338962 MSL1Q68DK7 614 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms