RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 DICER1Q9UPY3 1922 aaKnown RBP19.56■□□□□ 0.72
PRKN-201ENST00000338468 COL4A1P02462 1669 aa19.56■□□□□ 0.72
PRKN-201ENST00000338468 IRS4O14654 1257 aaPredicted RBP19.55■□□□□ 0.72
PRKN-201ENST00000338468 PPEF1O14829 653 aaPredicted RBP19.55■□□□□ 0.72
PRKN-201ENST00000338468 FKBP4Q02790 459 aaKnown RBP eCLIP19.55■□□□□ 0.72
PRKN-201ENST00000338468 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
PRKN-201ENST00000338468 CWC25Q9NXE8 425 aaPredicted RBP19.55■□□□□ 0.72
PRKN-201ENST00000338468 TAF1P21675 1872 aa19.54■□□□□ 0.72
PRKN-201ENST00000338468 POTECB2RU33 542 aa19.54■□□□□ 0.72
PRKN-201ENST00000338468 PCCAP05165 728 aaPredicted RBP19.54■□□□□ 0.72
PRKN-201ENST00000338468 SF3B3Q15393 1217 aaKnown RBP19.54■□□□□ 0.72
PRKN-201ENST00000338468 TRMT2AQ8IZ69 625 aaKnown RBP19.54■□□□□ 0.72
PRKN-201ENST00000338468 RTKN2Q8IZC4 609 aa19.54■□□□□ 0.72
PRKN-201ENST00000338468 FKBP5Q13451 457 aaPredicted RBP19.53■□□□□ 0.72
PRKN-201ENST00000338468 CWF19L2Q2TBE0 894 aaKnown RBP19.53■□□□□ 0.72
PRKN-201ENST00000338468 ZNF277Q9NRM2 450 aaPredicted RBP19.53■□□□□ 0.72
PRKN-201ENST00000338468 NEURL1BA8MQ27 555 aa19.52■□□□□ 0.72
PRKN-201ENST00000338468 CC2D2BQ6DHV5 1058 aa19.52■□□□□ 0.72
PRKN-201ENST00000338468 CHADLQ6NUI6 762 aa19.52■□□□□ 0.72
PRKN-201ENST00000338468 DNAAF4Q8WXU2 420 aa19.52■□□□□ 0.72
PRKN-201ENST00000338468 CREBZFQ9NS37 354 aa19.52■□□□□ 0.72
PRKN-201ENST00000338468 ATP6V0A2Q9Y487 856 aa19.52■□□□□ 0.72
PRKN-201ENST00000338468 GRAPQ13588 217 aa19.51■□□□□ 0.71
PRKN-201ENST00000338468 DDX46Q7L014 1031 aaKnown RBP19.51■□□□□ 0.71
PRKN-201ENST00000338468 GRAPLQ8TC17 118 aaPredicted RBP19.51■□□□□ 0.71
PRKN-201ENST00000338468 PSMD1Q99460 953 aa19.51■□□□□ 0.71
PRKN-201ENST00000338468 COL4A5P29400 1685 aa19.5■□□□□ 0.71
PRKN-201ENST00000338468 F6X3S4 739 aa19.5■□□□□ 0.71
PRKN-201ENST00000338468 BBOX1O75936 387 aa19.5■□□□□ 0.71
PRKN-201ENST00000338468 NEXNQ0ZGT2 675 aa19.5■□□□□ 0.71
PRKN-201ENST00000338468 CDHR2Q9BYE9 1310 aa19.5■□□□□ 0.71
PRKN-201ENST00000338468 SP8Q8IXZ3 490 aa19.49■□□□□ 0.71
PRKN-201ENST00000338468 CELF1Q92879 486 aaKnown RBP19.49■□□□□ 0.71
PRKN-201ENST00000338468 MKRN1Q9UHC7 482 aaKnown RBP19.49■□□□□ 0.71
PRKN-201ENST00000338468 LRRC37AA6NMS7 1700 aa19.48■□□□□ 0.71
PRKN-201ENST00000338468 H7C1W4 665 aa19.48■□□□□ 0.71
PRKN-201ENST00000338468 IARSP41252 1262 aaKnown RBP19.48■□□□□ 0.71
PRKN-201ENST00000338468 GCKRQ14397 625 aa19.48■□□□□ 0.71
PRKN-201ENST00000338468 MRPL50Q8N5N7 158 aaKnown RBP19.48■□□□□ 0.71
PRKN-201ENST00000338468 LINS1Q8NG48 757 aa19.48■□□□□ 0.71
PRKN-201ENST00000338468 PDE8AO60658 829 aa19.47■□□□□ 0.71
PRKN-201ENST00000338468 CASP7P55210 303 aa19.47■□□□□ 0.71
PRKN-201ENST00000338468 GRIPAP1Q4V328 841 aa19.47■□□□□ 0.71
PRKN-201ENST00000338468 SEC31BQ9NQW1 1179 aa19.47■□□□□ 0.71
PRKN-201ENST00000338468 IQCA1LA6NCM1 817 aa19.46■□□□□ 0.71
PRKN-201ENST00000338468 BEND3Q5T5X7 828 aa19.46■□□□□ 0.71
PRKN-201ENST00000338468 SSH1Q8WYL5 1049 aa19.46■□□□□ 0.71
PRKN-201ENST00000338468 DUOX1Q9NRD9 1551 aa19.45■□□□□ 0.7
PRKN-201ENST00000338468 DDNO94850 711 aaPredicted RBP19.45■□□□□ 0.7
PRKN-201ENST00000338468 POTEIP0CG38 1075 aa19.45■□□□□ 0.7
PRKN-201ENST00000338468 POTEJP0CG39 1038 aa19.45■□□□□ 0.7
PRKN-201ENST00000338468 HSP90B1P14625 803 aaKnown RBP19.45■□□□□ 0.7
PRKN-201ENST00000338468 UBE3BQ7Z3V4 1068 aa19.45■□□□□ 0.7
PRKN-201ENST00000338468 RTFDC1Q9BY42 306 aaPredicted RBP19.45■□□□□ 0.7
PRKN-201ENST00000338468 CNTNAP1P78357 1384 aa19.44■□□□□ 0.7
PRKN-201ENST00000338468 CTSWP56202 376 aa19.44■□□□□ 0.7
PRKN-201ENST00000338468 TMC4Q7Z404 712 aa19.44■□□□□ 0.7
PRKN-201ENST00000338468 CCDC85AQ96PX6 553 aaPredicted RBP19.44■□□□□ 0.7
PRKN-201ENST00000338468 ZNF541Q9H0D2 1346 aa19.44■□□□□ 0.7
PRKN-201ENST00000338468 FZD9O00144 591 aa19.43■□□□□ 0.7
PRKN-201ENST00000338468 RPS8P62241 208 aaKnown RBP19.43■□□□□ 0.7
PRKN-201ENST00000338468 CCDC152Q4G0S7 254 aa19.43■□□□□ 0.7
PRKN-201ENST00000338468 LDHDQ86WU2 507 aa19.43■□□□□ 0.7
PRKN-201ENST00000338468 MPNDQ8N594 471 aa19.43■□□□□ 0.7
PRKN-201ENST00000338468 TTLL11Q8NHH1 800 aa19.43■□□□□ 0.7
PRKN-201ENST00000338468 LTBP1Q14766 1721 aa19.42■□□□□ 0.7
PRKN-201ENST00000338468 SCN4AP35499 1836 aa19.42■□□□□ 0.7
PRKN-201ENST00000338468 AIDAQ96BJ3 306 aa19.42■□□□□ 0.7
PRKN-201ENST00000338468 L3MBTL3Q96JM7 780 aaPredicted RBP19.42■□□□□ 0.7
PRKN-201ENST00000338468 PLA2G12BQ9BX93 195 aa19.42■□□□□ 0.7
PRKN-201ENST00000338468 BCL2L13Q9BXK5 485 aa19.42■□□□□ 0.7
PRKN-201ENST00000338468 MYH3P11055 1940 aa19.42■□□□□ 0.7
PRKN-201ENST00000338468 FOXN1O15353 648 aa19.41■□□□□ 0.7
PRKN-201ENST00000338468 AOC3Q16853 763 aa19.41■□□□□ 0.7
PRKN-201ENST00000338468 DPP8Q6V1X1 898 aaPredicted RBP19.41■□□□□ 0.7
PRKN-201ENST00000338468 TMX4Q9H1E5 349 aaPredicted RBP19.41■□□□□ 0.7
PRKN-201ENST00000338468 PASKQ96RG2 1323 aa19.41■□□□□ 0.7
PRKN-201ENST00000338468 RTL9Q8NET4 1388 aa19.41■□□□□ 0.7
PRKN-201ENST00000338468 GPSM2P81274 684 aa19.4■□□□□ 0.7
PRKN-201ENST00000338468 ALDH1L2Q3SY69 923 aa19.4■□□□□ 0.7
PRKN-201ENST00000338468 LARGE2Q8N3Y3 721 aa19.4■□□□□ 0.7
PRKN-201ENST00000338468 TAF1DQ9H5J8 278 aaPredicted RBP19.4■□□□□ 0.7
PRKN-201ENST00000338468 GREM2Q9H772 168 aa19.4■□□□□ 0.7
PRKN-201ENST00000338468 PRDM10Q9NQV6 1147 aa19.4■□□□□ 0.7
PRKN-201ENST00000338468 PPIP5K2O43314 1243 aa19.39■□□□□ 0.69
PRKN-201ENST00000338468 JDP2Q8WYK2 163 aa19.39■□□□□ 0.69
PRKN-201ENST00000338468 VPS33BQ9H267 617 aa19.39■□□□□ 0.69
PRKN-201ENST00000338468 TMEM88BA6NKF7 163 aa19.38■□□□□ 0.69
PRKN-201ENST00000338468 CSF1RP07333 972 aa19.38■□□□□ 0.69
PRKN-201ENST00000338468 PTPRCP08575 1304 aa19.38■□□□□ 0.69
PRKN-201ENST00000338468 CT47B1P0C2W7 299 aaPredicted RBP19.38■□□□□ 0.69
PRKN-201ENST00000338468 CTCFP49711 727 aaPredicted RBP19.38■□□□□ 0.69
PRKN-201ENST00000338468 HNRNPUQ00839 825 aaKnown RBP eCLIP19.38■□□□□ 0.69
PRKN-201ENST00000338468 SLC4A10Q6U841 1118 aa19.38■□□□□ 0.69
PRKN-201ENST00000338468 SUPT20HQ8NEM7 779 aa19.38■□□□□ 0.69
PRKN-201ENST00000338468 POLLQ9UGP5 575 aa19.38■□□□□ 0.69
PRKN-201ENST00000338468 ALDH1L1O75891 902 aa19.37■□□□□ 0.69
PRKN-201ENST00000338468 FOXO4P98177 505 aa19.37■□□□□ 0.69
PRKN-201ENST00000338468 KIAA2012Q0VF49 1180 aa19.37■□□□□ 0.69
PRKN-201ENST00000338468 EAPPQ56P03 285 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms