RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 ALDH1L1O75891 902 aa31.34■■■□□ 2.61
FAM78B-201ENST00000338353 SLC51AQ86UW1 340 aa31.34■■■□□ 2.61
FAM78B-201ENST00000338353 MYH3P11055 1940 aa31.33■■■□□ 2.61
FAM78B-201ENST00000338353 CASP7P55210 303 aa31.33■■■□□ 2.61
FAM78B-201ENST00000338353 GRAPQ13588 217 aa31.33■■■□□ 2.61
FAM78B-201ENST00000338353 GRAPLQ8TC17 118 aaPredicted RBP31.33■■■□□ 2.61
FAM78B-201ENST00000338353 KIF16BQ96L93 1317 aa31.32■■■□□ 2.6
FAM78B-201ENST00000338353 C9orf131Q5VYM1 1079 aa31.32■■■□□ 2.6
FAM78B-201ENST00000338353 CTSWP56202 376 aa31.31■■■□□ 2.6
FAM78B-201ENST00000338353 CCDC152Q4G0S7 254 aa31.31■■■□□ 2.6
FAM78B-201ENST00000338353 C9orf78Q9NZ63 289 aaPredicted RBP31.31■■■□□ 2.6
FAM78B-201ENST00000338353 CCDC88AQ3V6T2 1871 aa31.31■■■□□ 2.6
FAM78B-201ENST00000338353 BBOX1O75936 387 aa31.3■■■□□ 2.6
FAM78B-201ENST00000338353 TAOK3Q9H2K8 898 aa31.3■■■□□ 2.6
FAM78B-201ENST00000338353 RNF181Q9P0P0 153 aa31.3■■■□□ 2.6
FAM78B-201ENST00000338353 GRM8O00222 908 aa31.3■■■□□ 2.6
FAM78B-201ENST00000338353 PRELPP51888 382 aa31.3■■■□□ 2.6
FAM78B-201ENST00000338353 CELF1Q92879 486 aaKnown RBP31.3■■■□□ 2.6
FAM78B-201ENST00000338353 API5Q9BZZ5 524 aaKnown RBP31.3■■■□□ 2.6
FAM78B-201ENST00000338353 SEC31BQ9NQW1 1179 aa31.3■■■□□ 2.6
FAM78B-201ENST00000338353 RTKN2Q8IZC4 609 aa31.29■■■□□ 2.6
FAM78B-201ENST00000338353 SUPT16HQ9Y5B9 1047 aaKnown RBP31.29■■■□□ 2.6
FAM78B-201ENST00000338353 LMNB1P20700 586 aa31.28■■■□□ 2.6
FAM78B-201ENST00000338353 TTLL11Q8NHH1 800 aa31.28■■■□□ 2.6
FAM78B-201ENST00000338353 FRAT1Q92837 279 aaPredicted RBP31.28■■■□□ 2.6
FAM78B-201ENST00000338353 ATP6V0A2Q9Y487 856 aa31.28■■■□□ 2.6
FAM78B-201ENST00000338353 COL4A1P02462 1669 aa31.28■■■□□ 2.6
FAM78B-201ENST00000338353 CC2D2BQ6DHV5 1058 aa31.27■■■□□ 2.6
FAM78B-201ENST00000338353 PLA2G12BQ9BX93 195 aa31.27■■■□□ 2.6
FAM78B-201ENST00000338353 LTBP3Q9NS15 1303 aa31.27■■■□□ 2.6
FAM78B-201ENST00000338353 TMX4Q9H1E5 349 aaPredicted RBP31.26■■■□□ 2.6
FAM78B-201ENST00000338353 FKBP4Q02790 459 aaKnown RBP eCLIP31.25■■■□□ 2.59
FAM78B-201ENST00000338353 ARHGAP45Q92619 1136 aa31.25■■■□□ 2.59
FAM78B-201ENST00000338353 GREM2Q9H772 168 aa31.25■■■□□ 2.59
FAM78B-201ENST00000338353 IPO8O15397 1037 aaKnown RBP31.24■■■□□ 2.59
FAM78B-201ENST00000338353 RPS8P62241 208 aaKnown RBP31.24■■■□□ 2.59
FAM78B-201ENST00000338353 SP8Q8IXZ3 490 aa31.24■■■□□ 2.59
FAM78B-201ENST00000338353 SNED1Q8TER0 1413 aa31.24■■■□□ 2.59
FAM78B-201ENST00000338353 NBPF7P0C2Y1 421 aaPredicted RBP31.23■■■□□ 2.59
FAM78B-201ENST00000338353 CCT4P50991 539 aaKnown RBP31.22■■■□□ 2.59
FAM78B-201ENST00000338353 TMC4Q7Z404 712 aa31.22■■■□□ 2.59
FAM78B-201ENST00000338353 ZNF784Q8NCA9 323 aaPredicted RBP31.22■■■□□ 2.59
FAM78B-201ENST00000338353 ZNF277Q9NRM2 450 aaPredicted RBP31.22■■■□□ 2.59
FAM78B-201ENST00000338353 FOXO4P98177 505 aa31.21■■■□□ 2.59
FAM78B-201ENST00000338353 GRIPAP1Q4V328 841 aa31.21■■■□□ 2.59
FAM78B-201ENST00000338353 TRIM27P14373 513 aa31.2■■■□□ 2.58
FAM78B-201ENST00000338353 FAM161AQ3B820 660 aa31.2■■■□□ 2.58
FAM78B-201ENST00000338353 EPHA10Q5JZY3 1008 aa31.2■■■□□ 2.58
FAM78B-201ENST00000338353 ATF7IPQ6VMQ6 1270 aa31.2■■■□□ 2.58
FAM78B-201ENST00000338353 PSMD1Q99460 953 aa31.2■■■□□ 2.58
FAM78B-201ENST00000338353 TNNQ9UQP3 1299 aa31.2■■■□□ 2.58
FAM78B-201ENST00000338353 CSF1RP07333 972 aa31.19■■■□□ 2.58
FAM78B-201ENST00000338353 ANKRD18AQ8IVF6 992 aa31.19■■■□□ 2.58
FAM78B-201ENST00000338353 SUCLG2Q96I99 432 aa31.19■■■□□ 2.58
FAM78B-201ENST00000338353 CDC5LQ99459 802 aaKnown RBP31.19■■■□□ 2.58
FAM78B-201ENST00000338353 USP44Q9H0E7 712 aa31.19■■■□□ 2.58
FAM78B-201ENST00000338353 UTYO14607 1347 aa31.19■■■□□ 2.58
FAM78B-201ENST00000338353 RTL9Q8NET4 1388 aa31.19■■■□□ 2.58
FAM78B-201ENST00000338353 DICER1Q9UPY3 1922 aaKnown RBP31.18■■■□□ 2.58
FAM78B-201ENST00000338353 RRP1P56182 461 aaKnown RBP31.18■■■□□ 2.58
FAM78B-201ENST00000338353 CHMP3Q9Y3E7 222 aa31.18■■■□□ 2.58
FAM78B-201ENST00000338353 LRRC37AA6NMS7 1700 aa31.18■■■□□ 2.58
FAM78B-201ENST00000338353 ZKSCAN2Q63HK3 967 aa31.17■■■□□ 2.58
FAM78B-201ENST00000338353 MPNDQ8N594 471 aa31.17■■■□□ 2.58
FAM78B-201ENST00000338353 ZNF526Q8TF50 670 aaPredicted RBP31.17■■■□□ 2.58
FAM78B-201ENST00000338353 SPEF2Q9C093 1822 aa31.17■■■□□ 2.58
FAM78B-201ENST00000338353 TIAM2Q8IVF5 1701 aa31.17■■■□□ 2.58
FAM78B-201ENST00000338353 ITGA6P23229 1130 aa31.17■■■□□ 2.58
FAM78B-201ENST00000338353 LMBR1LQ6UX01 489 aa31.17■■■□□ 2.58
FAM78B-201ENST00000338353 DPP8Q6V1X1 898 aaPredicted RBP31.17■■■□□ 2.58
FAM78B-201ENST00000338353 CLUAP1Q96AJ1 413 aa31.17■■■□□ 2.58
FAM78B-201ENST00000338353 IARSP41252 1262 aaKnown RBP31.15■■■□□ 2.58
FAM78B-201ENST00000338353 KAZALD1Q96I82 304 aa31.15■■■□□ 2.58
FAM78B-201ENST00000338353 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.14■■■□□ 2.58
FAM78B-201ENST00000338353 INTS3Q68E01 1043 aaKnown RBP31.13■■■□□ 2.57
FAM78B-201ENST00000338353 NSFL1CQ9UNZ2 370 aaKnown RBP31.13■■■□□ 2.57
FAM78B-201ENST00000338353 GPSM2P81274 684 aa31.13■■■□□ 2.57
FAM78B-201ENST00000338353 ANKRD18BA2A2Z9 1011 aa31.12■■■□□ 2.57
FAM78B-201ENST00000338353 IFIT5Q13325 482 aaKnown RBP31.12■■■□□ 2.57
FAM78B-201ENST00000338353 BICC1Q9H694 974 aaKnown RBP31.12■■■□□ 2.57
FAM78B-201ENST00000338353 ZC3H4Q9UPT8 1303 aaKnown RBP31.11■■■□□ 2.57
FAM78B-201ENST00000338353 IGHMBP2P38935 993 aaKnown RBP31.11■■■□□ 2.57
FAM78B-201ENST00000338353 SUPT20HQ8NEM7 779 aa31.11■■■□□ 2.57
FAM78B-201ENST00000338353 RTFDC1Q9BY42 306 aaPredicted RBP31.11■■■□□ 2.57
FAM78B-201ENST00000338353 BSDC1Q9NW68 430 aaPredicted RBP31.1■■■□□ 2.57
FAM78B-201ENST00000338353 DUOX1Q9NRD9 1551 aa31.09■■■□□ 2.57
FAM78B-201ENST00000338353 PPIP5K2O43314 1243 aa31.09■■■□□ 2.57
FAM78B-201ENST00000338353 UBTFL1P0CB47 393 aaPredicted RBP31.09■■■□□ 2.57
FAM78B-201ENST00000338353 AOC3Q16853 763 aa31.09■■■□□ 2.57
FAM78B-201ENST00000338353 CCDC57Q2TAC2 916 aa31.09■■■□□ 2.57
FAM78B-201ENST00000338353 LARGE2Q8N3Y3 721 aa31.09■■■□□ 2.57
FAM78B-201ENST00000338353 MPHOSPH8Q99549 860 aa31.09■■■□□ 2.57
FAM78B-201ENST00000338353 GPBP1L1Q9HC44 474 aaPredicted RBP31.09■■■□□ 2.57
FAM78B-201ENST00000338353 ANKIB1Q9P2G1 1089 aa31.09■■■□□ 2.57
FAM78B-201ENST00000338353 ANKRD44Q8N8A2 993 aa31.08■■■□□ 2.57
FAM78B-201ENST00000338353 MEIS3Q99687 375 aa31.08■■■□□ 2.57
FAM78B-201ENST00000338353 C6orf229H3BNL8 230 aa31.07■■■□□ 2.56
FAM78B-201ENST00000338353 NEFLP07196 543 aa31.07■■■□□ 2.56
FAM78B-201ENST00000338353 FTSJ3Q8IY81 847 aaKnown RBP31.07■■■□□ 2.56
FAM78B-201ENST00000338353 TMEM57Q8N5G2 664 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms