RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PPIP5K2O43314 1243 aa13.82□□□□□ -0.2
CAPN3-202ENST00000337571 GNAI1P63096 354 aa13.82□□□□□ -0.2
CAPN3-202ENST00000337571 DUSP27Q5VZP5 1158 aa13.82□□□□□ -0.2
CAPN3-202ENST00000337571 DPP8Q6V1X1 898 aaPredicted RBP13.82□□□□□ -0.2
CAPN3-202ENST00000337571 SP8Q8IXZ3 490 aa13.82□□□□□ -0.2
CAPN3-202ENST00000337571 CHMP4AQ9BY43 222 aa13.82□□□□□ -0.2
CAPN3-202ENST00000337571 MPNDQ8N594 471 aa13.81□□□□□ -0.2
CAPN3-202ENST00000337571 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
CAPN3-202ENST00000337571 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
CAPN3-202ENST00000337571 ABCC4O15439 1325 aa13.81□□□□□ -0.2
CAPN3-202ENST00000337571 TMEM88BA6NKF7 163 aa13.8□□□□□ -0.2
CAPN3-202ENST00000337571 TMC4Q7Z404 712 aa13.8□□□□□ -0.2
CAPN3-202ENST00000337571 RIC3Q7Z5B4 369 aa13.8□□□□□ -0.2
CAPN3-202ENST00000337571 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
CAPN3-202ENST00000337571 CNTROBQ8N137 903 aa13.8□□□□□ -0.2
CAPN3-202ENST00000337571 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
CAPN3-202ENST00000337571 ATP5J2-PTCD1G3V325 749 aa13.79□□□□□ -0.2
CAPN3-202ENST00000337571 ITGBL1O95965 494 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-202ENST00000337571 HSP90B1P14625 803 aaKnown RBP13.79□□□□□ -0.2
CAPN3-202ENST00000337571 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
CAPN3-202ENST00000337571 GRAPQ13588 217 aa13.79□□□□□ -0.2
CAPN3-202ENST00000337571 AOC3Q16853 763 aa13.79□□□□□ -0.2
CAPN3-202ENST00000337571 GRAPLQ8TC17 118 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-202ENST00000337571 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
CAPN3-202ENST00000337571 FAM89AQ96GI7 184 aa13.79□□□□□ -0.2
CAPN3-202ENST00000337571 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
CAPN3-202ENST00000337571 SSUH2Q9Y2M2 353 aa13.79□□□□□ -0.2
CAPN3-202ENST00000337571 PASKQ96RG2 1323 aa13.79□□□□□ -0.2
CAPN3-202ENST00000337571 SNED1Q8TER0 1413 aa13.79□□□□□ -0.2
CAPN3-202ENST00000337571 ELL2O00472 640 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-202ENST00000337571 HSPA1AP0DMV8 641 aaKnown RBP13.78□□□□□ -0.2
CAPN3-202ENST00000337571 HSPA1BP0DMV9 641 aaKnown RBP13.78□□□□□ -0.2
CAPN3-202ENST00000337571 MAP1SQ66K74 1059 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-202ENST00000337571 USP50Q70EL3 339 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-202ENST00000337571 RTFDC1Q9BY42 306 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-202ENST00000337571 LAMB2P55268 1798 aa13.78□□□□□ -0.2
CAPN3-202ENST00000337571 ZNF853P0CG23 659 aa13.77□□□□□ -0.21
CAPN3-202ENST00000337571 TNIP1Q15025 636 aa13.77□□□□□ -0.21
CAPN3-202ENST00000337571 COL13A1Q5TAT6 717 aaPredicted RBP13.77□□□□□ -0.21
CAPN3-202ENST00000337571 ISCA1Q9BUE6 129 aa13.77□□□□□ -0.21
CAPN3-202ENST00000337571 DDX58O95786 925 aaKnown RBP13.76□□□□□ -0.21
CAPN3-202ENST00000337571 EPS15P42566 896 aa13.76□□□□□ -0.21
CAPN3-202ENST00000337571 TRIM28Q13263 835 aaKnown RBP13.76□□□□□ -0.21
CAPN3-202ENST00000337571 RTL5Q5HYW3 569 aaPredicted RBP13.76□□□□□ -0.21
CAPN3-202ENST00000337571 BCL2L13Q9BXK5 485 aa13.76□□□□□ -0.21
CAPN3-202ENST00000337571 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
CAPN3-202ENST00000337571 SCNN1DP51172 638 aa13.75□□□□□ -0.21
CAPN3-202ENST00000337571 CXCL9Q07325 125 aa13.75□□□□□ -0.21
CAPN3-202ENST00000337571 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
CAPN3-202ENST00000337571 SF3B3Q15393 1217 aaKnown RBP13.75□□□□□ -0.21
CAPN3-202ENST00000337571 CCDC30Q5VVM6 783 aa13.75□□□□□ -0.21
CAPN3-202ENST00000337571 CIAPIN1Q6FI81 312 aa13.75□□□□□ -0.21
CAPN3-202ENST00000337571 SLC51AQ86UW1 340 aa13.75□□□□□ -0.21
CAPN3-202ENST00000337571 ADARB2Q9NS39 739 aaKnown RBP13.75□□□□□ -0.21
CAPN3-202ENST00000337571 GPRC5DQ9NZD1 345 aa13.75□□□□□ -0.21
CAPN3-202ENST00000337571 ABT1Q9ULW3 272 aaKnown RBP13.75□□□□□ -0.21
CAPN3-202ENST00000337571 NSFL1CQ9UNZ2 370 aaKnown RBP13.75□□□□□ -0.21
CAPN3-202ENST00000337571 COL4A5P29400 1685 aa13.75□□□□□ -0.21
CAPN3-202ENST00000337571 TAF1P21675 1872 aa13.74□□□□□ -0.21
CAPN3-202ENST00000337571 CNTNAP1P78357 1384 aa13.74□□□□□ -0.21
CAPN3-202ENST00000337571 C6orf229H3BNL8 230 aa13.74□□□□□ -0.21
CAPN3-202ENST00000337571 ZEB1P37275 1124 aaPredicted RBP13.74□□□□□ -0.21
CAPN3-202ENST00000337571 WASHC4Q2M389 1173 aa13.74□□□□□ -0.21
CAPN3-202ENST00000337571 DEFB115Q30KQ5 88 aa13.74□□□□□ -0.21
CAPN3-202ENST00000337571 TNS4Q8IZW8 715 aa13.74□□□□□ -0.21
CAPN3-202ENST00000337571 C8orf58Q8NAV2 365 aa13.74□□□□□ -0.21
CAPN3-202ENST00000337571 AIDAQ96BJ3 306 aa13.74□□□□□ -0.21
CAPN3-202ENST00000337571 PHAXQ9H814 394 aaKnown RBP13.74□□□□□ -0.21
CAPN3-202ENST00000337571 RAD17O75943 681 aa13.73□□□□□ -0.21
CAPN3-202ENST00000337571 VEGFBP49765 207 aa13.73□□□□□ -0.21
CAPN3-202ENST00000337571 GMPSP49915 693 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-202ENST00000337571 RPS8P62241 208 aaKnown RBP13.73□□□□□ -0.21
CAPN3-202ENST00000337571 ZBTB38Q8NAP3 1195 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-202ENST00000337571 CCDC191Q8NCU4 936 aa13.73□□□□□ -0.21
CAPN3-202ENST00000337571 EYA3Q99504 573 aa13.73□□□□□ -0.21
CAPN3-202ENST00000337571 MYD88Q99836 296 aa13.73□□□□□ -0.21
CAPN3-202ENST00000337571 ADAMTSL1Q8N6G6 1762 aa13.73□□□□□ -0.21
CAPN3-202ENST00000337571 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
CAPN3-202ENST00000337571 G3V3G9 751 aa13.72□□□□□ -0.21
CAPN3-202ENST00000337571 H7C1D1 291 aa13.72□□□□□ -0.21
CAPN3-202ENST00000337571 RIMBP2O15034 1052 aa13.72□□□□□ -0.21
CAPN3-202ENST00000337571 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
CAPN3-202ENST00000337571 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
CAPN3-202ENST00000337571 STK31Q9BXU1 1019 aa13.72□□□□□ -0.21
CAPN3-202ENST00000337571 CWC25Q9NXE8 425 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-202ENST00000337571 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
CAPN3-202ENST00000337571 CCDC152Q4G0S7 254 aa13.71□□□□□ -0.21
CAPN3-202ENST00000337571 ZC3H12CQ9C0D7 883 aaKnown RBP13.71□□□□□ -0.21
CAPN3-202ENST00000337571 CNOT7Q9UIV1 285 aaKnown RBP13.71□□□□□ -0.21
CAPN3-202ENST00000337571 CDHR2Q9BYE9 1310 aa13.7□□□□□ -0.22
CAPN3-202ENST00000337571 RASSF10A6NK89 507 aa13.7□□□□□ -0.22
CAPN3-202ENST00000337571 PDE8AO60658 829 aa13.7□□□□□ -0.22
CAPN3-202ENST00000337571 NEXNQ0ZGT2 675 aa13.7□□□□□ -0.22
CAPN3-202ENST00000337571 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
CAPN3-202ENST00000337571 METTL22Q9BUU2 404 aaPredicted RBP13.7□□□□□ -0.22
CAPN3-202ENST00000337571 ANKIB1Q9P2G1 1089 aa13.7□□□□□ -0.22
CAPN3-202ENST00000337571 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
CAPN3-202ENST00000337571 ANP32CO43423 234 aa13.69□□□□□ -0.22
CAPN3-202ENST00000337571 PCCAP05165 728 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-202ENST00000337571 ECE1P42892 770 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms