RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 WWC1Q8IX03 1113 aa22.86■■□□□ 1.25
CMTM1-204ENST00000336328 CCDC191Q8NCU4 936 aa22.86■■□□□ 1.25
CMTM1-204ENST00000336328 PHAXQ9H814 394 aaKnown RBP22.86■■□□□ 1.25
CMTM1-204ENST00000336328 CREBZFQ9NS37 354 aa22.86■■□□□ 1.25
CMTM1-204ENST00000336328 IRS4O14654 1257 aaPredicted RBP22.85■■□□□ 1.25
CMTM1-204ENST00000336328 ZBTB38Q8NAP3 1195 aaPredicted RBP22.85■■□□□ 1.25
CMTM1-204ENST00000336328 STK31Q9BXU1 1019 aa22.85■■□□□ 1.25
CMTM1-204ENST00000336328 ZNRF3Q9ULT6 936 aa22.85■■□□□ 1.25
CMTM1-204ENST00000336328 IL16Q14005 1332 aa22.84■■□□□ 1.25
CMTM1-204ENST00000336328 POTEIP0CG38 1075 aa22.84■■□□□ 1.25
CMTM1-204ENST00000336328 POTEJP0CG39 1038 aa22.84■■□□□ 1.25
CMTM1-204ENST00000336328 AOC3Q16853 763 aa22.84■■□□□ 1.25
CMTM1-204ENST00000336328 KIAA2012Q0VF49 1180 aa22.82■■□□□ 1.24
CMTM1-204ENST00000336328 MYD88Q99836 296 aa22.82■■□□□ 1.24
CMTM1-204ENST00000336328 METTL22Q9BUU2 404 aaPredicted RBP22.82■■□□□ 1.24
CMTM1-204ENST00000336328 LAMB2P55268 1798 aa22.81■■□□□ 1.24
CMTM1-204ENST00000336328 TNIP1Q15025 636 aa22.81■■□□□ 1.24
CMTM1-204ENST00000336328 RTL5Q5HYW3 569 aaPredicted RBP22.81■■□□□ 1.24
CMTM1-204ENST00000336328 CWC25Q9NXE8 425 aaPredicted RBP22.81■■□□□ 1.24
CMTM1-204ENST00000336328 ITGBL1O95965 494 aaPredicted RBP22.8■■□□□ 1.24
CMTM1-204ENST00000336328 PCCAP05165 728 aaPredicted RBP22.8■■□□□ 1.24
CMTM1-204ENST00000336328 RPS8P62241 208 aaKnown RBP22.8■■□□□ 1.24
CMTM1-204ENST00000336328 NEXNQ0ZGT2 675 aa22.8■■□□□ 1.24
CMTM1-204ENST00000336328 KSR2Q6VAB6 950 aa22.8■■□□□ 1.24
CMTM1-204ENST00000336328 USP50Q70EL3 339 aaPredicted RBP22.8■■□□□ 1.24
CMTM1-204ENST00000336328 CNTROBQ8N137 903 aa22.8■■□□□ 1.24
CMTM1-204ENST00000336328 ZNF428Q96B54 188 aa22.8■■□□□ 1.24
CMTM1-204ENST00000336328 PASKQ96RG2 1323 aa22.8■■□□□ 1.24
CMTM1-204ENST00000336328 TWISTNBQ3B726 338 aaPredicted RBP22.79■■□□□ 1.24
CMTM1-204ENST00000336328 IFFO2Q5TF58 517 aa22.79■■□□□ 1.24
CMTM1-204ENST00000336328 WDR63Q8IWG1 891 aa22.79■■□□□ 1.24
CMTM1-204ENST00000336328 TSPYL6Q8N831 410 aa22.79■■□□□ 1.24
CMTM1-204ENST00000336328 NSFL1CQ9UNZ2 370 aaKnown RBP22.79■■□□□ 1.24
CMTM1-204ENST00000336328 TMEM88BA6NKF7 163 aa22.78■■□□□ 1.24
CMTM1-204ENST00000336328 CXCL9Q07325 125 aa22.78■■□□□ 1.24
CMTM1-204ENST00000336328 WASHC4Q2M389 1173 aa22.78■■□□□ 1.24
CMTM1-204ENST00000336328 CCDC152Q4G0S7 254 aa22.78■■□□□ 1.24
CMTM1-204ENST00000336328 CIAPIN1Q6FI81 312 aa22.78■■□□□ 1.24
CMTM1-204ENST00000336328 TSR2Q969E8 191 aaKnown RBP22.78■■□□□ 1.24
CMTM1-204ENST00000336328 PDE8AO60658 829 aa22.77■■□□□ 1.24
CMTM1-204ENST00000336328 EPS15P42566 896 aa22.77■■□□□ 1.24
CMTM1-204ENST00000336328 SCNN1DP51172 638 aa22.77■■□□□ 1.24
CMTM1-204ENST00000336328 CELF1Q92879 486 aaKnown RBP22.77■■□□□ 1.24
CMTM1-204ENST00000336328 EYA3Q99504 573 aa22.77■■□□□ 1.24
CMTM1-204ENST00000336328 MAP3K2Q9Y2U5 619 aa22.77■■□□□ 1.24
CMTM1-204ENST00000336328 BCL2L13Q9BXK5 485 aa22.76■■□□□ 1.23
CMTM1-204ENST00000336328 DDX60Q8IY21 1712 aaKnown RBP22.76■■□□□ 1.23
CMTM1-204ENST00000336328 COL4A5P29400 1685 aa22.75■■□□□ 1.23
CMTM1-204ENST00000336328 PI4KAP2A4QPH2 592 aa22.75■■□□□ 1.23
CMTM1-204ENST00000336328 C6orf229H3BNL8 230 aa22.75■■□□□ 1.23
CMTM1-204ENST00000336328 SLC4A2P04920 1241 aa22.75■■□□□ 1.23
CMTM1-204ENST00000336328 MAP1SQ66K74 1059 aaPredicted RBP22.75■■□□□ 1.23
CMTM1-204ENST00000336328 SLC51AQ86UW1 340 aa22.75■■□□□ 1.23
CMTM1-204ENST00000336328 PI4KAP1Q8N8J0 262 aa22.75■■□□□ 1.23
CMTM1-204ENST00000336328 ADARB2Q9NS39 739 aaKnown RBP22.75■■□□□ 1.23
CMTM1-204ENST00000336328 GPRC5DQ9NZD1 345 aa22.75■■□□□ 1.23
CMTM1-204ENST00000336328 CDHR2Q9BYE9 1310 aa22.75■■□□□ 1.23
CMTM1-204ENST00000336328 TAF1P21675 1872 aa22.75■■□□□ 1.23
CMTM1-204ENST00000336328 MKRN1Q9UHC7 482 aaKnown RBP22.73■■□□□ 1.23
CMTM1-204ENST00000336328 ZC3H12CQ9C0D7 883 aaKnown RBP22.72■■□□□ 1.23
CMTM1-204ENST00000336328 H7C1D1 291 aa22.71■■□□□ 1.23
CMTM1-204ENST00000336328 RAD17O75943 681 aa22.71■■□□□ 1.23
CMTM1-204ENST00000336328 GMPSP49915 693 aaPredicted RBP22.71■■□□□ 1.23
CMTM1-204ENST00000336328 GPSM2P81274 684 aa22.71■■□□□ 1.23
CMTM1-204ENST00000336328 PODXL2Q9NZ53 605 aa22.71■■□□□ 1.23
CMTM1-204ENST00000336328 SALL2Q9Y467 1007 aaPredicted RBP22.71■■□□□ 1.23
CMTM1-204ENST00000336328 ADAMTSL1Q8N6G6 1762 aa22.71■■□□□ 1.23
CMTM1-204ENST00000336328 CACNA1FO60840 1977 aa22.7■■□□□ 1.23
CMTM1-204ENST00000336328 G3V3G9 751 aa22.7■■□□□ 1.22
CMTM1-204ENST00000336328 DCAF8Q5TAQ9 597 aa22.7■■□□□ 1.22
CMTM1-204ENST00000336328 ANKRD18AQ8IVF6 992 aa22.7■■□□□ 1.22
CMTM1-204ENST00000336328 ZC3H15Q8WU90 426 aaKnown RBP22.7■■□□□ 1.22
CMTM1-204ENST00000336328 DPF2Q92785 391 aa22.7■■□□□ 1.22
CMTM1-204ENST00000336328 SEC31BQ9NQW1 1179 aa22.7■■□□□ 1.22
CMTM1-204ENST00000336328 ANKIB1Q9P2G1 1089 aa22.7■■□□□ 1.22
CMTM1-204ENST00000336328 POLLQ9UGP5 575 aa22.7■■□□□ 1.22
CMTM1-204ENST00000336328 CNTNAP1P78357 1384 aa22.69■■□□□ 1.22
CMTM1-204ENST00000336328 RIMBP2O15034 1052 aa22.69■■□□□ 1.22
CMTM1-204ENST00000336328 IGKV5-2P06315 115 aa22.69■■□□□ 1.22
CMTM1-204ENST00000336328 TBC1D16Q8TBP0 767 aa22.69■■□□□ 1.22
CMTM1-204ENST00000336328 CDC5LQ99459 802 aaKnown RBP22.69■■□□□ 1.22
CMTM1-204ENST00000336328 CNOT7Q9UIV1 285 aaKnown RBP22.69■■□□□ 1.22
CMTM1-204ENST00000336328 LRRC37AA6NMS7 1700 aa22.68■■□□□ 1.22
CMTM1-204ENST00000336328 DEFB115Q30KQ5 88 aa22.68■■□□□ 1.22
CMTM1-204ENST00000336328 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
CMTM1-204ENST00000336328 JARID2Q92833 1246 aaPredicted RBP22.68■■□□□ 1.22
CMTM1-204ENST00000336328 MYH16Q9H6N6 1097 aa22.68■■□□□ 1.22
CMTM1-204ENST00000336328 GGA1Q9UJY5 639 aa22.68■■□□□ 1.22
CMTM1-204ENST00000336328 FANCIQ9NVI1 1328 aa22.67■■□□□ 1.22
CMTM1-204ENST00000336328 VAMP4O75379 141 aa22.67■■□□□ 1.22
CMTM1-204ENST00000336328 HSPA1AP0DMV8 641 aaKnown RBP22.67■■□□□ 1.22
CMTM1-204ENST00000336328 HSPA1BP0DMV9 641 aaKnown RBP22.67■■□□□ 1.22
CMTM1-204ENST00000336328 FLIIQ13045 1269 aa22.67■■□□□ 1.22
CMTM1-204ENST00000336328 YDJCA8MPS7 323 aa22.66■■□□□ 1.22
CMTM1-204ENST00000336328 NEURL1BA8MQ27 555 aa22.66■■□□□ 1.22
CMTM1-204ENST00000336328 RPS12P25398 132 aaKnown RBP22.66■■□□□ 1.22
CMTM1-204ENST00000336328 CTSWP56202 376 aa22.66■■□□□ 1.22
CMTM1-204ENST00000336328 FKBP5Q13451 457 aaPredicted RBP22.66■■□□□ 1.22
CMTM1-204ENST00000336328 G2E3Q7L622 706 aa22.66■■□□□ 1.22
CMTM1-204ENST00000336328 DBNDD1Q9H9R9 158 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms