RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 GOLIM4O00461 696 aa17.72■□□□□ 0.43
UBA1-201ENST00000335972 TAF5LO75529 589 aa17.72■□□□□ 0.43
UBA1-201ENST00000335972 SYAP1Q96A49 352 aaPredicted RBP17.72■□□□□ 0.43
UBA1-201ENST00000335972 MST1RQ04912 1400 aa17.72■□□□□ 0.43
UBA1-201ENST00000335972 LRRC24Q50LG9 513 aa17.72■□□□□ 0.43
UBA1-201ENST00000335972 EPB41L2O43491 1005 aaKnown RBP17.71■□□□□ 0.43
UBA1-201ENST00000335972 CAMK4Q16566 473 aa17.71■□□□□ 0.43
UBA1-201ENST00000335972 HSP90B1P14625 803 aaKnown RBP17.71■□□□□ 0.43
UBA1-201ENST00000335972 COPRSQ9NQ92 184 aa17.71■□□□□ 0.43
UBA1-201ENST00000335972 TAOK2Q9UL54 1235 aa17.71■□□□□ 0.43
UBA1-201ENST00000335972 TOB2Q14106 344 aaPredicted RBP17.71■□□□□ 0.43
UBA1-201ENST00000335972 SNRKQ9NRH2 765 aa17.71■□□□□ 0.43
UBA1-201ENST00000335972 CHST3Q7LGC8 479 aa17.7■□□□□ 0.42
UBA1-201ENST00000335972 PDLIM2Q96JY6 352 aa17.7■□□□□ 0.42
UBA1-201ENST00000335972 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
UBA1-201ENST00000335972 ZNF142P52746 1687 aaPredicted RBP17.7■□□□□ 0.42
UBA1-201ENST00000335972 OVOS2A0A0G2JMS6 1433 aa17.7■□□□□ 0.42
UBA1-201ENST00000335972 RPS6KB1P23443 525 aa17.7■□□□□ 0.42
UBA1-201ENST00000335972 HSP90AB3PQ58FF7 597 aa17.7■□□□□ 0.42
UBA1-201ENST00000335972 PHRF1Q9P1Y6 1649 aaKnown RBP17.69■□□□□ 0.42
UBA1-201ENST00000335972 HIP1O00291 1037 aa17.69■□□□□ 0.42
UBA1-201ENST00000335972 TM6SF1Q9BZW5 370 aa17.69■□□□□ 0.42
UBA1-201ENST00000335972 FGD1P98174 961 aa17.69■□□□□ 0.42
UBA1-201ENST00000335972 CEBPZQ03701 1054 aaKnown RBP17.69■□□□□ 0.42
UBA1-201ENST00000335972 ZSCAN31Q96LW9 406 aaPredicted RBP17.69■□□□□ 0.42
UBA1-201ENST00000335972 KAT6BQ8WYB5 2073 aa17.69■□□□□ 0.42
UBA1-201ENST00000335972 CCDC183Q5T5S1 534 aa17.69■□□□□ 0.42
UBA1-201ENST00000335972 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
UBA1-201ENST00000335972 SH2B1Q9NRF2 756 aaPredicted RBP17.69■□□□□ 0.42
UBA1-201ENST00000335972 PSMA5P28066 241 aa17.68■□□□□ 0.42
UBA1-201ENST00000335972 UBE2HP62256 183 aa17.68■□□□□ 0.42
UBA1-201ENST00000335972 PLBD2Q8NHP8 589 aa17.68■□□□□ 0.42
UBA1-201ENST00000335972 ZCRB1Q8TBF4 217 aaKnown RBP17.68■□□□□ 0.42
UBA1-201ENST00000335972 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
UBA1-201ENST00000335972 ATP5JP18859 108 aa17.68■□□□□ 0.42
UBA1-201ENST00000335972 TTC6Q86TZ1 520 aa17.68■□□□□ 0.42
UBA1-201ENST00000335972 KCNB2Q92953 911 aa17.68■□□□□ 0.42
UBA1-201ENST00000335972 R3HCC1Q9Y3T6 440 aaKnown RBP17.68■□□□□ 0.42
UBA1-201ENST00000335972 ADAMTSL3P82987 1691 aa17.68■□□□□ 0.42
UBA1-201ENST00000335972 MED23Q9ULK4 1368 aa17.68■□□□□ 0.42
UBA1-201ENST00000335972 Q6ZUG5 572 aa17.68■□□□□ 0.42
UBA1-201ENST00000335972 C17orf53Q8N3J3 647 aaPredicted RBP17.68■□□□□ 0.42
UBA1-201ENST00000335972 ZNF609O15014 1411 aa17.68■□□□□ 0.42
UBA1-201ENST00000335972 CYP21A2P08686 494 aa17.67■□□□□ 0.42
UBA1-201ENST00000335972 FOXO4P98177 505 aa17.67■□□□□ 0.42
UBA1-201ENST00000335972 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
UBA1-201ENST00000335972 SYNE4Q8N205 404 aa17.67■□□□□ 0.42
UBA1-201ENST00000335972 SPATA31A3Q5VYP0 1347 aa17.67■□□□□ 0.42
UBA1-201ENST00000335972 CASP7P55210 303 aa17.67■□□□□ 0.42
UBA1-201ENST00000335972 BRF1Q92994 677 aa17.66■□□□□ 0.42
UBA1-201ENST00000335972 LIG1P18858 919 aa17.66■□□□□ 0.42
UBA1-201ENST00000335972 CKAP2LQ8IYA6 745 aa17.66■□□□□ 0.42
UBA1-201ENST00000335972 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.421e-7■■□□□ 11.5
UBA1-201ENST00000335972 FKBP4Q02790 459 aaKnown RBP eCLIP17.65■□□□□ 0.42
UBA1-201ENST00000335972 RABL6Q3YEC7 729 aaPredicted RBP17.65■□□□□ 0.42
UBA1-201ENST00000335972 STOX1Q6ZVD7 989 aa17.65■□□□□ 0.42
UBA1-201ENST00000335972 ATG9AQ7Z3C6 839 aa17.65■□□□□ 0.42
UBA1-201ENST00000335972 NEK1Q96PY6 1258 aa17.65■□□□□ 0.42
UBA1-201ENST00000335972 CWC25Q9NXE8 425 aaPredicted RBP17.65■□□□□ 0.42
UBA1-201ENST00000335972 NOL7Q9UMY1 257 aaKnown RBP17.65■□□□□ 0.42
UBA1-201ENST00000335972 ATP6V1DQ9Y5K8 247 aa17.65■□□□□ 0.42
UBA1-201ENST00000335972 PHF14O94880 888 aa17.65■□□□□ 0.42
UBA1-201ENST00000335972 CCT2P78371 535 aaKnown RBP17.65■□□□□ 0.42
UBA1-201ENST00000335972 BRINP3Q76B58 766 aa17.65■□□□□ 0.42
UBA1-201ENST00000335972 CRYBG1Q9Y4K1 1723 aa17.65■□□□□ 0.42
UBA1-201ENST00000335972 SCN11AQ9UI33 1791 aa17.65■□□□□ 0.42
UBA1-201ENST00000335972 A0A0G2JS52 829 aa17.64■□□□□ 0.41
UBA1-201ENST00000335972 TTLL5Q6EMB2 1281 aa17.64■□□□□ 0.41
UBA1-201ENST00000335972 RAB11FIP4Q86YS3 637 aa17.64■□□□□ 0.41
UBA1-201ENST00000335972 TMEM87AQ8NBN3 555 aa17.64■□□□□ 0.41
UBA1-201ENST00000335972 TNS3Q68CZ2 1445 aa17.64■□□□□ 0.41
UBA1-201ENST00000335972 MCMDC2Q4G0Z9 681 aa17.64■□□□□ 0.41
UBA1-201ENST00000335972 FAM89AQ96GI7 184 aa17.64■□□□□ 0.41
UBA1-201ENST00000335972 HAUS7Q99871 368 aa17.64■□□□□ 0.41
UBA1-201ENST00000335972 TTC12Q9H892 705 aaPredicted RBP17.64■□□□□ 0.41
UBA1-201ENST00000335972 NCOA5Q9HCD5 579 aaKnown RBP17.64■□□□□ 0.41
UBA1-201ENST00000335972 ADCY5O95622 1261 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 EVA1CP58658 441 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 GUCY1B3Q02153 619 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 ZKSCAN5Q9Y2L8 839 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 GPTP24298 496 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 ADORA1P30542 326 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 HAND2P61296 217 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 PI16Q6UXB8 463 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.63■□□□□ 0.413e-7■■□□□ 11.8
UBA1-201ENST00000335972 ALS2Q96Q42 1657 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 H7C1W4 665 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 APOBRQ0VD83 1088 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 GPHNQ9NQX3 736 aaPredicted RBP17.63■□□□□ 0.41
UBA1-201ENST00000335972 PAG1Q9NWQ8 432 aa17.63■□□□□ 0.41
UBA1-201ENST00000335972 FTOQ9C0B1 505 aaKnown RBP eCLIP17.62■□□□□ 0.415e-12■□□□□ 10.4
UBA1-201ENST00000335972 AP5Z1O43299 807 aa17.61■□□□□ 0.41
UBA1-201ENST00000335972 SPC24Q8NBT2 197 aa17.61■□□□□ 0.41
UBA1-201ENST00000335972 CCDC39Q9UFE4 941 aa17.61■□□□□ 0.41
UBA1-201ENST00000335972 A0A1B0GUL7 405 aa17.61■□□□□ 0.41
UBA1-201ENST00000335972 KRT85P78386 507 aa17.61■□□□□ 0.41
UBA1-201ENST00000335972 RBM10P98175 930 aaKnown RBP17.61■□□□□ 0.41
UBA1-201ENST00000335972 ASAP1Q9ULH1 1129 aa17.61■□□□□ 0.41
UBA1-201ENST00000335972 CAMTA1Q9Y6Y1 1673 aa17.61■□□□□ 0.41
UBA1-201ENST00000335972 IFIT1P09914 478 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms